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Results for MligTC455_12347

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12347 413 8.61 Mlig455_057555

Neo: -

Age: -

 ARL13B Mlig455_057555 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=104.2]; G-protein alpha subunit [PF00503.22, score=24.5]} {Human: ENSG00000169379, ARL13B, ADP ribosylation factor like GTPase 13B, [RH, Score=168, Expect=5e-47]} {Mouse: ENSMUSG00000022911, Arl13b, ADP-ribosylation factor-like 13B, [RH, Score=150, Expect=1e-40]} {Dmel: FBgn0030088, Arfrp1, ADP-ribosylation factor related protein 1, [Score=85.1, Expect=6e-19]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=76.3, Expect=5e-16]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [Score=80.5, Expect=2e-17]} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1310_8918.2, RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341, RNA815_11168}

Cumulative graph for MligTC455_12347

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.556 3.61 0.73162 1.00000
RegionR2 -0.65 3.61 0.21412 0.57987
RegionR3 -0.349 3.61 0.39931 0.92806
RegionR4 0.868 3.61 0.11738 0.34231
RegionR5 0.424 3.61 0.23373 0.54195
RegionR6 -0.107 3.61 0.79152 1.00000
RegionR7 -0.129 3.61 0.81328 1.00000
RegionR8 -0.612 3.61 0.39198 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.745 3.61 0.16369 0.90551
RegenerationR2 -0.304 3.61 0.40835 0.81896
RegenerationR3 -0.565 3.61 0.19066 0.62567
RegenerationR4 -0.949 3.61 0.05031 0.36120
RegenerationR5 -0.501 3.61 0.18737 0.61761
RegenerationR6 -0.795 3.61 0.07504 0.34250
RegenerationBL -0.199 3.61 0.74282 1.00000
RegenerationTP -0.944 3.61 0.15813 0.58586


Genes with expression patterns similar to MligTC455_12347

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12347 413 8.61 Mlig455_057555

Neo: -

Age: -

 ARL13B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_057555 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=104.2]; G-protein alpha subunit [PF00503.22, score=24.5]} {Human: ENSG00000169379, ARL13B, ADP ribosylation factor like GTPase 13B, [RH, Score=168, Expect=5e-47]} {Mouse: ENSMUSG00000022911, Arl13b, ADP-ribosylation factor-like 13B, [RH, Score=150, Expect=1e-40]} {Dmel: FBgn0030088, Arfrp1, ADP-ribosylation factor related protein 1, [Score=85.1, Expect=6e-19]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=76.3, Expect=5e-16]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [Score=80.5, Expect=2e-17]} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1310_8918.2, RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341, RNA815_11168}
2. MligTC455_52442 73 1.53 Mlig455_007385

Neo: -

Age: -

 2.437 - - 0.730 0.980 0.727 - Mlig455_007385 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1310_134979}
3. MligTC455_19541 763 15.89 Mlig455_017578, Mlig455_058797

Neo: -

Age: -

Region-enriched R2: 2.206/0.02794

 1.777 - - - 0.816 - 0.961

Mlig455_017578 {REF} {Length: 3002} {RNA1509_26479} {RNA1310_2814.2} {RNA815_11124}

Mlig455_058797 {REF} {Length: 3902} {RNA1509_26479} {RNA1310_2814.2, RNA1509_26479} {RNA1509_26479, RNA815_11124}
4. MligTC455_28716 541 11.27 Mlig455_025780

Neo: -

Age: Up-Down-Down

 LRBA 1.706 - - - 0.953 0.753 - Mlig455_025780 {REF} {Length: 11353} {TRANSSPLICED} {Pfam: Beige/BEACH domain [PF02138.20, score=401.6]; Domain of unknown function (DUF4704) [PF15787.7, score=278.4]; Domain of Unknown Function (DUF1088) [PF06469.13, score=220.0]; PH domain associated with Beige/BEACH [PF14844.8, score=85.4]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=43.5]; WD domain, G-beta repeat [PF00400.34, score=35.5]} {Human: ENSG00000198589, LRBA, LPS responsive beige-like anchor protein, [RH, Score=1306, Expect=0.0]; ENSG00000172915, NBEA, neurobeachin, [RH, Score=1291, Expect=0.0]} {Mouse: ENSMUSG00000028080, Lrba, LPS-responsive beige-like anchor, [RH, Score=1305, Expect=0.0]; ENSMUSG00000027799, Nbea, neurobeachin, [RH, Score=1290, Expect=0.0]} {Dmel: FBgn0266098, rg, rugose, [RH, Score=1776, Expect=0.0]} {Celegans: WBGene00004760, sel-2, Putative neurobeachin homolog, [RH, Score=1279, Expect=0.0]} {Smed: dd_Smed_v6_3880_0_1, dd_Smed_v6_3880_0_1, [RH, Score=2092, Expect=0.0]} {RNA1509_56158, RNA1509_57979} {RNA1310_1088.1, RNA1509_57979} {RNA1509_57979, RNA815_635}
5. MligTC455_17259 601 12.53 Mlig455_044948, Mlig455_055558

Neo: -

Age: -

 USP33 0.966 - - - 0.966 - -

Mlig455_044948 {REF} {Length: 3111} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=214.6]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=52.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=40.9]; DUSP domain [PF06337.14, score=39.0]} {Human: ENSG00000077254, USP33, ubiquitin specific peptidase 33, [Score=334, Expect=1e-101]; ENSG00000136878, USP20, ubiquitin specific peptidase 20, [Score=329, Expect=5e-100]} {Mouse: ENSMUSG00000025437, Usp33, ubiquitin specific peptidase 33, [Score=338, Expect=2e-103]; ENSMUSG00000026854, Usp20, ubiquitin specific peptidase 20, [Score=324, Expect=2e-98]} {Dmel: FBgn0033916, Usp20-33, Ubiquitin specific protease 20/33, [Score=293, Expect=2e-86]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=163, Expect=5e-42]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [Score=251, Expect=9e-73]} {RNA1509_43048, RNA1509_47811} {RNA1310_6576.1, RNA1509_47811} {RNA1509_47811, RNA815_6235}

Mlig455_055558 {REF} {Length: 3909} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=211.7]; DUSP domain [PF06337.14, score=72.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=55.8]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=41.4]} {Human: ENSG00000077254, USP33, ubiquitin specific peptidase 33, [RH, Score=443, Expect=2e-141]; ENSG00000136878, USP20, ubiquitin specific peptidase 20, [RH, Score=438, Expect=6e-140]} {Mouse: ENSMUSG00000025437, Usp33, ubiquitin specific peptidase 33, [RH, Score=449, Expect=2e-144]; ENSMUSG00000026854, Usp20, ubiquitin specific peptidase 20, [RH, Score=434, Expect=3e-138]} {Dmel: FBgn0033916, Usp20-33, Ubiquitin specific protease 20/33, [RH, Score=469, Expect=4e-151]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=132, Expect=1e-31]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [RH, Score=347, Expect=2e-107]} {RNA1509_10702, RNA1509_43048} {RNA1310_6576.1, RNA1509_10702, RNA1509_43048} {RNA1509_10702, RNA1509_43048, RNA815_6235}
6. MligTC455_46661 166 3.46 Mlig455_012054, Mlig455_012070, Mlig455_029095

Neo: -

Age: -

 VPS11 0.964 - - - - - 0.964

Mlig455_012054 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=638, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.2, Expect=3e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437, RNA1509_37539} {RNA1310_3770.1, RNA1509_11437, RNA1509_37539} {RNA1509_11437, RNA1509_37539, RNA815_1127}

Mlig455_012070 {REF} {Length: 4935} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=61.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=23.0]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.6, Expect=2e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437} {RNA1310_3770.1} {RNA815_1127}

Mlig455_029095 {REF} {Length: 655} {Pfam: Region in Clathrin and VPS [PF00637.22, score=35.1]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=124, Expect=3e-32]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=64.7, Expect=4e-12]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [Score=64.3, Expect=4e-12]} {RNA1509_41261} {RNA1310_13766} {RNA815_1127}
7. MligTC455_20628 439 9.14 Mlig455_058160, Mlig455_058225, Mlig455_058231

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_058160 {REF} {Length: 3431} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=4e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=201, Expect=2e-58]} {RNA1509_19499} {RNA1310_13236.1} {RNA815_4665}

Mlig455_058225 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.1, RNA1509_19499} {RNA1509_19499, RNA815_4665}

Mlig455_058231 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.2} {RNA815_4665}
8. MligTC455_18622 1380 28.74 Mlig455_048306, Mlig455_048330, Mlig455_048348

Neo: -

Age: Down-Up-Up

 0.955 - - 0.955 - - -

Mlig455_048306 {REF} {Length: 1557} {Dmel: FBgn0029697, CG15570, [Score=46.2, Expect=1e-05]} {RNA1509_37007} {RNA1310_36773} {RNA815_23485}

Mlig455_048330 {REF} {Length: 2288} {Dmel: FBgn0029697, CG15570, [Score=46.2, Expect=1e-05]} {RNA1509_37007} {RNA1310_36773} {RNA815_20973}

Mlig455_048348 {REF} {Length: 2214} {RNA1509_37007} {RNA1310_36773} {RNA815_23485}
9. MligTC455_11502 179 3.73 Mlig455_062843

Neo: Int S/G2/M

Age: Down-Up-Down

 UHRF1 0.953 - - - - - 0.953 Mlig455_062843 {REF} {Length: 2536} {TRANSSPLICED} {Pfam: SAD/SRA domain [PF02182.19, score=169.0]} {Human: ENSG00000276043, UHRF1, ubiquitin like with PHD and ring finger domains 1, [Score=152, Expect=3e-38]} {Mouse: ENSMUSG00000001228, Uhrf1, ubiquitin-like, containing PHD and RING finger domains, 1, [Score=154, Expect=3e-39]} {RNA1509_25446} {RNA1310_8743} {RNA815_6882}
10. MligTC455_42673 862 17.96 Mlig455_017086

Neo: -

Age: Down-Down-Up

 0.95 - - - - 0.950 - Mlig455_017086 {REF} {Length: 1828} {Pfam: Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=40.6]; TATA element modulatory factor 1 DNA binding [PF12329.10, score=31.9]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=31.8]; Laminin Domain II [PF06009.14, score=31.1]; Crescentin protein [PF19220.2, score=30.6]; Bacterial protein of unknown function (DUF948) [PF06103.13, score=30.4]; Formin Homology 2 Domain [PF02181.25, score=30.2]; Intra-flagellar transport protein 57 [PF10498.11, score=29.8]; Protein of unknown function (DUF1664) [PF07889.14, score=28.6]; Growth-arrest specific micro-tubule binding [PF13851.8, score=28.6]; Domain of unknown function (DUF4201) [PF13870.8, score=27.2]; Autophagy protein 16 (ATG16) [PF08614.13, score=25.7]; Septation ring formation regulator, EzrA [PF06160.14, score=25.2]; Myelin regulatory factor ICA domain [PF13887.8, score=24.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=24.8]; Biogenesis of lysosome-related organelles complex-1 subunit 2 [PF10046.11, score=24.7]; BRE1 E3 ubiquitin ligase [PF08647.13, score=24.6]; Haemolysin XhlA [PF10779.11, score=24.6]; AAA domain [PF13166.8, score=24.6]; Seryl-tRNA synthetase N-terminal domain [PF02403.24, score=23.9]; Vps51/Vps67 [PF08700.13, score=23.9]; Domain of unknown function (DUF2935) [PF11155.10, score=23.9]; Vps53-like, N-terminal [PF04100.14, score=23.3]; Protein of unknown function (DUF713) [PF05218.16, score=23.3]; BAR domain of APPL family [PF16746.7, score=23.2]; Apolipoprotein A1/A4/E domain [PF01442.20, score=22.9]; Cholesterol uptake porter CUP1 of Mce4, putative [PF11887.10, score=22.7]; Exonuclease VII, large subunit [PF02601.17, score=22.3]; Uncharacterized conserved protein [PF10241.11, score=22.2]; Initiation control protein YabA [PF06156.15, score=22.1]; Protein of unknown function (DUF3829) [PF12889.9, score=21.9]; Flagellar FliJ protein [PF02050.18, score=21.7]; Apg6 coiled-coil region [PF17675.3, score=21.7]; Golgi transport complex subunit 5 [PF10392.11, score=21.4]; Inhibitor of growth proteins N-terminal histone-binding [PF12998.9, score=21.3]; COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=21.2]; Autophagy protein ATG17-like domain [PF04108.14, score=21.0]; Prefoldin subunit [PF01920.22, score=20.6]; Zinc finger-containing protein [PF10146.11, score=20.6]; Hydrophobic surface binding protein A [PF12296.10, score=20.5]; Protein of unknown function (DUF3450) [PF11932.10, score=20.4]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=20.1]; Fungal N-terminal domain of STAND proteins [PF17111.7, score=19.9]; Cell division protein ZapB [PF06005.14, score=19.8]; Tape measure protein [PF20155.1, score=19.8]; Spc7 kinetochore protein [PF08317.13, score=19.4]; Afadin- and alpha -actinin-Binding [PF11559.10, score=19.4]; Fez1 [PF06818.17, score=19.3]; Uncharacterized conserved protein (DUF2203) [PF09969.11, score=19.3]; Protein of unknown function (DUF745) [PF05335.15, score=19.2]; RNA polymerase II transcription mediator complex subunit 9 [PF07544.15, score=19.2]; DASH complex subunit Dam1 [PF08653.12, score=19.2]; TMPIT-like protein [PF07851.15, score=19.0]; Spindle and kinetochore-associated protein 1 [PF07160.14, score=18.8]; Calcium binding and coiled-coil domain (CALCOCO1) like [PF07888.13, score=18.2]; Prominin [PF05478.13, score=17.8]; Myosin tail [PF01576.21, score=17.4]} {Mouse: ENSMUSG00000043183, Simc1, SUMO-interacting motifs containing 1, [Score=74.7, Expect=4e-16]} {RNA1509_46691} {RNA1310_4498.2, RNA1509_46691} {RNA1509_46691, RNA815_1649}

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