TomoSeq data search

Data search

Results for MligTC455_46661

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46661	166	3.46	Mlig455_012054, Mlig455_012070, Mlig455_029095	Neo: - Age: -	VPS11	Mlig455_012054 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=638, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.2, Expect=3e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437, RNA1509_37539} {RNA1310_3770.1, RNA1509_11437, RNA1509_37539} {RNA1509_11437, RNA1509_37539, RNA815_1127} Mlig455_012070 {REF} {Length: 4935} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=61.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=23.0]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.6, Expect=2e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437} {RNA1310_3770.1} {RNA815_1127} Mlig455_029095 {REF} {Length: 655} {Pfam: Region in Clathrin and VPS [PF00637.22, score=35.1]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=124, Expect=3e-32]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=64.7, Expect=4e-12]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [Score=64.3, Expect=4e-12]} {RNA1509_41261} {RNA1310_13766} {RNA815_1127}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46661

166

3.46

Mlig455_012054, Mlig455_012070, Mlig455_029095

Neo: -

Age: -

VPS11

Mlig455_012054 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=638, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.2, Expect=3e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437, RNA1509_37539} {RNA1310_3770.1, RNA1509_11437, RNA1509_37539} {RNA1509_11437, RNA1509_37539, RNA815_1127}

Mlig455_012070 {REF} {Length: 4935} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=61.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=23.0]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.6, Expect=2e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437} {RNA1310_3770.1} {RNA815_1127}

Mlig455_029095 {REF} {Length: 655} {Pfam: Region in Clathrin and VPS [PF00637.22, score=35.1]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=124, Expect=3e-32]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=64.7, Expect=4e-12]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [Score=64.3, Expect=4e-12]} {RNA1509_41261} {RNA1310_13766} {RNA815_1127}

Cumulative graph for MligTC455_46661

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.946	2.556	0.30169	0.95154
RegionR2	-0.287	2.556	0.89472	1.00000
RegionR3	1.194	2.556	0.10866	0.57409
RegionR4	1.305	2.556	0.16401	0.42377
RegionR5	1.373	2.556	0.04372	0.17009
RegionR6	0.717	2.556	0.35630	0.94078
RegionR7	0.172	2.556	0.73321	1.00000
RegionR8	-6.422	2.556	0.01342	0.22280

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.351	2.556	0.33028	1.00000
RegenerationR2	0.529	2.556	0.43034	0.83418
RegenerationR3	-0.14	2.556	0.84083	0.99504
RegenerationR4	-0.677	2.556	0.38391	0.80371
RegenerationR5	-0.321	2.556	0.60381	0.91162
RegenerationR6	-0.089	2.556	0.90646	1.00000
RegenerationBL	2.444	2.556	0.09737	0.36620
RegenerationTP	3.539	2.556	0.04013	0.33357

Genes with expression patterns similar to MligTC455_46661

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46661	166	3.46	Mlig455_012054, Mlig455_012070, Mlig455_029095	Neo: - Age: -	VPS11	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012054 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=62.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=22.9]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]; ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=635, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=638, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.2, Expect=3e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437, RNA1509_37539} {RNA1310_3770.1, RNA1509_11437, RNA1509_37539} {RNA1509_11437, RNA1509_37539, RNA815_1127} Mlig455_012070 {REF} {Length: 4935} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=61.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.9]; Ring finger domain [PF13639.8, score=23.0]; RING-H2 zinc finger domain [PF12678.9, score=20.9]; Zinc-finger [PF17122.7, score=19.9]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [RH, Score=637, Expect=0.0]} {Dmel: FBgn0052350, Vps11, Vacuolar protein sorting 11, [RH, Score=78.6, Expect=2e-14]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [RH, Score=272, Expect=2e-76]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [RH, Score=184, Expect=4e-50]} {RNA1509_11437} {RNA1310_3770.1} {RNA815_1127} Mlig455_029095 {REF} {Length: 655} {Pfam: Region in Clathrin and VPS [PF00637.22, score=35.1]} {Human: ENSG00000160695, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]; ENSG00000280616, VPS11, VPS11, CORVET/HOPS core subunit, [Score=123, Expect=5e-32]} {Mouse: ENSMUSG00000032127, Vps11, VPS11, CORVET/HOPS core subunit, [Score=124, Expect=3e-32]} {Celegans: WBGene00011067, vps-11, Vacuolar protein sorting-associated protein 11 homolog, [Score=64.7, Expect=4e-12]} {Smed: dd_Smed_v6_7053_0_1, dd_Smed_v6_7053_0_1, [Score=64.3, Expect=4e-12]} {RNA1509_41261} {RNA1310_13766} {RNA815_1127}
2.	MligTC455_12347	413	8.61	Mlig455_057555	Neo: - Age: -	ARL13B	0.964	-	-	-	-	-	0.964	Mlig455_057555 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=104.2]; G-protein alpha subunit [PF00503.22, score=24.5]} {Human: ENSG00000169379, ARL13B, ADP ribosylation factor like GTPase 13B, [RH, Score=168, Expect=5e-47]} {Mouse: ENSMUSG00000022911, Arl13b, ADP-ribosylation factor-like 13B, [RH, Score=150, Expect=1e-40]} {Dmel: FBgn0030088, Arfrp1, ADP-ribosylation factor related protein 1, [Score=85.1, Expect=6e-19]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=76.3, Expect=5e-16]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [Score=80.5, Expect=2e-17]} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1310_8918.2, RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341, RNA815_11168}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46661

166

3.46

Mlig455_012054, Mlig455_012070, Mlig455_029095

Neo: -

Age: -

VPS11

1.000

MligTC455_12347

413

8.61

Mlig455_057555

Neo: -

Age: -

ARL13B

0.964

Mlig455_057555 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=104.2]; G-protein alpha subunit [PF00503.22, score=24.5]} {Human: ENSG00000169379, ARL13B, ADP ribosylation factor like GTPase 13B, [RH, Score=168, Expect=5e-47]} {Mouse: ENSMUSG00000022911, Arl13b, ADP-ribosylation factor-like 13B, [RH, Score=150, Expect=1e-40]} {Dmel: FBgn0030088, Arfrp1, ADP-ribosylation factor related protein 1, [Score=85.1, Expect=6e-19]} {Celegans: WBGene00022678, sar-1, GTP-binding protein SAR1, [Score=76.3, Expect=5e-16]} {Smed: dd_Smed_v6_3383_0_1, dd_Smed_v6_3383_0_1, [Score=80.5, Expect=2e-17]} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1310_8918.2, RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341} {RNA1509_18029, RNA1509_51839, RNA1509_54984, RNA1509_55341, RNA815_11168}