TomoSeq data search

Data search

Results for MligTC455_12426

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12426	23	0.47	Mlig455_067596, Mlig455_069879	Neo: - Age: -		Mlig455_067596 {REF} {Length: 1173} {RNA1310_70857} Mlig455_069879 {REF} {Length: 1520} {Pfam: Type II secretion system (T2SS), protein I [PF02501.19, score=18.7]} {RNA1310_70857}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_12426

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.513	1.085	0.99969	1.00000
RegionR2	-0.032	1.085	0.99933	1.00000
RegionR3	-1.014	1.085	0.99973	1.00000
RegionR4	0.637	1.085	1.00000	1.00000
RegionR5	-1.074	1.085	0.99973	1.00000
RegionR6	-0.886	1.085	0.99973	1.00000
RegionR7	0.058	1.085	1.00000	1.00000
RegionR8	-0.202	1.085	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.15	1.085	1.00000	1.00000
RegenerationR2	4.163	1.085	0.02757	0.27427
RegenerationR3	5.441	1.085	0.42261	0.81728
RegenerationR4	3.705	1.085	0.58653	0.90753
RegenerationR5	4.275	1.085	0.25702	0.68922
RegenerationR6	4.476	1.085	0.14798	0.47127
RegenerationBL	1.496	1.085	1.00000	1.00000
RegenerationTP	3.67	1.085	0.64043	0.98382

Genes with expression patterns similar to MligTC455_12426

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12426	23	0.47	Mlig455_067596, Mlig455_069879	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_067596 {REF} {Length: 1173} {RNA1310_70857} Mlig455_069879 {REF} {Length: 1520} {Pfam: Type II secretion system (T2SS), protein I [PF02501.19, score=18.7]} {RNA1310_70857}
2.	MligTC455_51762	12	0.26	Mlig455_040782, Mlig455_064617	Neo: - Age: -	CALM1	0.97	-	-	-	-	0.970	-	Mlig455_040782 {REF} {Length: 1554} {Pfam: EF hand [PF00036.34, score=50.6]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=47.0]; EF-hand domain pair [PF13833.8, score=46.6]; EF hand [PF13202.8, score=43.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=63.5, Expect=2e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=63.2, Expect=2e-11]; ENSG00000143933, CALM2, calmodulin 2, [Score=63.2, Expect=2e-11]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=63.2, Expect=2e-11]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=63.2, Expect=2e-11]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0011273, Acam, Androcam, [Score=61.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=60.5, Expect=7e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=60.5, Expect=6e-11]} {RNA1310_3346} {RNA815_14542} Mlig455_064617 {REF} {Length: 1432} {Pfam: EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=30.6]; EF hand [PF00036.34, score=27.4]; EF-hand domain [PF13405.8, score=25.3]; EF hand [PF13202.8, score=22.3]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=49.7, Expect=7e-06]} {RNA1310_3185.1} {RNA815_31045}
3.	MligTC455_29976	108	2.25	Mlig455_062241	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_062241 {REF} {Length: 3092} {tRNA: Asp(GTC), score=67.3} {RNA1310_34632} {RNA815_15994}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_12426

0.47

Mlig455_067596, Mlig455_069879

Neo: -

Age: -

1.000

Mlig455_067596 {REF} {Length: 1173} {RNA1310_70857}

Mlig455_069879 {REF} {Length: 1520} {Pfam: Type II secretion system (T2SS), protein I [PF02501.19, score=18.7]} {RNA1310_70857}

MligTC455_51762

0.26

Mlig455_040782, Mlig455_064617

Neo: -

Age: -

CALM1

0.97

0.970

Mlig455_040782 {REF} {Length: 1554} {Pfam: EF hand [PF00036.34, score=50.6]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=47.0]; EF-hand domain pair [PF13833.8, score=46.6]; EF hand [PF13202.8, score=43.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=63.5, Expect=2e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=63.2, Expect=2e-11]; ENSG00000143933, CALM2, calmodulin 2, [Score=63.2, Expect=2e-11]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=63.2, Expect=2e-11]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=63.2, Expect=2e-11]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0011273, Acam, Androcam, [Score=61.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=60.5, Expect=7e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=60.5, Expect=6e-11]} {RNA1310_3346} {RNA815_14542}

Mlig455_064617 {REF} {Length: 1432} {Pfam: EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=30.6]; EF hand [PF00036.34, score=27.4]; EF-hand domain [PF13405.8, score=25.3]; EF hand [PF13202.8, score=22.3]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=49.7, Expect=7e-06]} {RNA1310_3185.1} {RNA815_31045}

MligTC455_29976

108

2.25

Mlig455_062241

Neo: -

Age: -

0.952

Mlig455_062241 {REF} {Length: 3092} {tRNA: Asp(GTC), score=67.3} {RNA1310_34632} {RNA815_15994}