TomoSeq data search

Data search

Results for MligTC455_51762

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51762	12	0.26	Mlig455_040782, Mlig455_064617	Neo: - Age: -	CALM1	Mlig455_040782 {REF} {Length: 1554} {Pfam: EF hand [PF00036.34, score=50.6]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=47.0]; EF-hand domain pair [PF13833.8, score=46.6]; EF hand [PF13202.8, score=43.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=63.5, Expect=2e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=63.2, Expect=2e-11]; ENSG00000143933, CALM2, calmodulin 2, [Score=63.2, Expect=2e-11]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=63.2, Expect=2e-11]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=63.2, Expect=2e-11]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0011273, Acam, Androcam, [Score=61.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=60.5, Expect=7e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=60.5, Expect=6e-11]} {RNA1310_3346} {RNA815_14542} Mlig455_064617 {REF} {Length: 1432} {Pfam: EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=30.6]; EF hand [PF00036.34, score=27.4]; EF-hand domain [PF13405.8, score=25.3]; EF hand [PF13202.8, score=22.3]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=49.7, Expect=7e-06]} {RNA1310_3185.1} {RNA815_31045}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51762

0.26

Mlig455_040782, Mlig455_064617

Neo: -

Age: -

CALM1

Mlig455_040782 {REF} {Length: 1554} {Pfam: EF hand [PF00036.34, score=50.6]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=47.0]; EF-hand domain pair [PF13833.8, score=46.6]; EF hand [PF13202.8, score=43.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=63.5, Expect=2e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=63.2, Expect=2e-11]; ENSG00000143933, CALM2, calmodulin 2, [Score=63.2, Expect=2e-11]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=63.2, Expect=2e-11]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=63.2, Expect=2e-11]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0011273, Acam, Androcam, [Score=61.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=60.5, Expect=7e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=60.5, Expect=6e-11]} {RNA1310_3346} {RNA815_14542}

Mlig455_064617 {REF} {Length: 1432} {Pfam: EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=30.6]; EF hand [PF00036.34, score=27.4]; EF-hand domain [PF13405.8, score=25.3]; EF hand [PF13202.8, score=22.3]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=49.7, Expect=7e-06]} {RNA1310_3185.1} {RNA815_31045}

Cumulative graph for MligTC455_51762

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.024	0.686	1.00000	1.00000
RegionR2	0.914	0.686	1.00000	1.00000
RegionR3	-0.302	0.686	1.00000	1.00000
RegionR4	-1.165	0.686	1.00000	1.00000
RegionR5	-0.849	0.686	1.00000	1.00000
RegionR6	-0.376	0.686	1.00000	1.00000
RegionR7	0.708	0.686	1.00000	1.00000
RegionR8	1.045	0.686	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.263	0.686	1.00000	1.00000
RegenerationR2	2.575	0.686	0.10354	0.50761
RegenerationR3	3.422	0.686	0.35116	0.77140
RegenerationR4	0.412	0.686	1.00000	1.00000
RegenerationR5	3.163	0.686	0.28097	0.70982
RegenerationR6	3.373	0.686	0.24311	0.59112
RegenerationBL	-0.311	0.686	1.00000	1.00000
RegenerationTP	-0.254	0.686	1.00000	1.00000

Genes with expression patterns similar to MligTC455_51762

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51762	12	0.26	Mlig455_040782, Mlig455_064617	Neo: - Age: -	CALM1	1	-	-	-	-	1.000	-	Mlig455_040782 {REF} {Length: 1554} {Pfam: EF hand [PF00036.34, score=50.6]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=47.0]; EF-hand domain pair [PF13833.8, score=46.6]; EF hand [PF13202.8, score=43.9]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=63.5, Expect=2e-11]; ENSG00000160014, CALM3, calmodulin 3, [Score=63.2, Expect=2e-11]; ENSG00000143933, CALM2, calmodulin 2, [Score=63.2, Expect=2e-11]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=63.2, Expect=2e-11]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=63.2, Expect=2e-11]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0011273, Acam, Androcam, [Score=61.2, Expect=5e-11]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=60.5, Expect=7e-11]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=60.5, Expect=6e-11]} {RNA1310_3346} {RNA815_14542} Mlig455_064617 {REF} {Length: 1432} {Pfam: EF-hand domain pair [PF13833.8, score=35.9]; EF-hand domain pair [PF13499.8, score=30.6]; EF hand [PF00036.34, score=27.4]; EF-hand domain [PF13405.8, score=25.3]; EF hand [PF13202.8, score=22.3]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=49.7, Expect=7e-06]} {RNA1310_3185.1} {RNA815_31045}
2.	MligTC455_12426	23	0.47	Mlig455_067596, Mlig455_069879	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_067596 {REF} {Length: 1173} {RNA1310_70857} Mlig455_069879 {REF} {Length: 1520} {Pfam: Type II secretion system (T2SS), protein I [PF02501.19, score=18.7]} {RNA1310_70857}
3.	MligTC455_53623	66	1.37	Mlig455_062576	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_062576 {REF} {Length: 3190} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=77.7]} {Dmel: FBgn0029723, Proc-R, Proctolin receptor, [RH, Score=76.6, Expect=1e-14]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [Score=93.2, Expect=3e-20]} {Smed: dd_Smed_v6_16149_0_1, dd_Smed_v6_16149_0_1, [Score=141, Expect=4e-38]} {RNA1509_25415} {RNA1310_42304} {RNA815_54656}
4.	MligTC455_06836	20	0.41	Mlig455_053687, Mlig455_064880	Neo: - Age: logFC(26M/2M)=-0.375		0.959	-	-	-	-	0.959	-	Mlig455_053687 {REF} {Length: 504} {RNA1509_10507} {RNA1310_3824.1} {RNA815_2706} Mlig455_064880 {REF} {Length: 499} {RNA1509_10507} {RNA1310_3824.1} {RNA815_2706}
5.	MligTC455_37205	7	0.15	Mlig455_026085	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_026085 {REF} {Length: 1810} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_103302} {RNA815_32053}
6.	MligTC455_14237	21	0.43	Mlig455_053376	Neo: - Age: Up-Down-Down	PKD1L2	0.953	-	-	-	-	0.953	-	Mlig455_053376 {REF} {Length: 14165} {Pfam: Polycystin cation channel [PF08016.14, score=279.0]; PKD domain [PF00801.22, score=96.3]; REJ domain [PF02010.17, score=93.9]; PKD domain [PF18911.2, score=77.2]; PLAT/LH2 domain [PF01477.25, score=57.5]; Ion transport protein [PF00520.33, score=48.8]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [RH, Score=264, Expect=2e-69]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=287, Expect=1e-76]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=149, Expect=2e-35]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=133, Expect=7e-31]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=514, Expect=4e-146]} {RNA1310_42963} {RNA815_40360}