M. lignano Tomo-Seq
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Results for MligTC455_12450

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12450 325 6.76 Mlig455_057586

Neo: Int S/G2/M

Age: -

 Mlig455_057586 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_10133} {RNA1310_7734.3} {RNA815_24501}

Cumulative graph for MligTC455_12450

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.067 3.357 0.40264 1.00000
RegionR2 0.18 3.357 0.79156 1.00000
RegionR3 0.503 3.357 0.30470 0.84594
RegionR4 0.508 3.357 0.34891 0.67031
RegionR5 0.855 3.357 0.04213 0.16544
RegionR6 0.046 3.357 0.92669 1.00000
RegionR7 -0.709 3.357 0.35693 0.99374
RegionR8 -0.315 3.357 0.72843 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.704 3.357 0.39791 1.00000
RegenerationR2 -0.063 3.357 0.90767 1.00000
RegenerationR3 0.356 3.357 0.53781 0.87616
RegenerationR4 -0.258 3.357 0.65978 0.93815
RegenerationR5 -0.216 3.357 0.68108 0.94415
RegenerationR6 -0.106 3.357 0.86716 1.00000
RegenerationBL 1.018 3.357 0.18580 0.51688
RegenerationTP 2.09 3.357 0.00487 0.11657


Genes with expression patterns similar to MligTC455_12450

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12450 325 6.76 Mlig455_057586

Neo: Int S/G2/M

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_057586 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_10133} {RNA1310_7734.3} {RNA815_24501}
2. MligTC455_45447 448 9.32 Mlig455_058767

Neo: -

Age: logFC(26M/2M)=-0.553

 ZNF330 0.975 - - - - - 0.975 Mlig455_058767 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: NOA36 protein [PF06524.14, score=468.2]} {Human: ENSG00000109445, ZNF330, zinc finger protein 330, [RH, Score=354, Expect=3e-122]} {Mouse: ENSMUSG00000031711, Zfp330, zinc finger protein 330, [RH, Score=357, Expect=1e-123]} {Dmel: FBgn0026400, Noa36, [RH, Score=367, Expect=9e-128]} {Smed: dd_Smed_v6_6139_0_1, dd_Smed_v6_6139_0_1, [RH, Score=367, Expect=6e-128]} {RNA1509_6034} {RNA1310_22107.1} {RNA815_8837}
3. MligTC455_15114 111 2.32 Mlig455_022690, Mlig455_022704, Mlig455_070618

Neo: -

Age: Up-Down-Up

Region-enriched R3: 3.217/0.00259

 0.961 - - - - 0.961 -

Mlig455_022690 {REF} {Length: 2470} {Dmel: FBgn0053265, Muc68E, Mucin 68E, [Score=49.7, Expect=4e-07]} {RNA1310_82963} {RNA815_53456}

Mlig455_022704 {REF} {Length: 2776} {Pfam: EGF-like domain [PF00008.29, score=28.0]; Human growth factor-like EGF [PF12661.9, score=22.6]; Complement Clr-like EGF-like [PF12662.9, score=21.0]; EGF-like domain [PF07974.15, score=19.1]} {RNA1509_41656} {RNA1310_43177} {RNA815_53456}

Mlig455_070618 {REF} {Length: 5333} {Pfam: EGF-like domain [PF00008.29, score=28.1]; Human growth factor-like EGF [PF12661.9, score=20.7]; Complement Clr-like EGF-like [PF12662.9, score=20.0]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=70.5, Expect=1e-11]} {Dmel: FBgn0053265, Muc68E, Mucin 68E, [Score=177, Expect=9e-45]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=53.5, Expect=1e-06]} {RNA1509_41656} {RNA1310_43177} {RNA815_53456}
4. MligTC455_43514 599 12.48 Mlig455_008579

Neo: -

Age: -

 OSBPL9 0.961 - - - - - 0.961 Mlig455_008579 {REF} {Length: 4182} {Pfam: Oxysterol-binding protein [PF01237.20, score=252.0]; PH domain [PF00169.31, score=48.5]; Pleckstrin homology domain [PF15409.8, score=30.7]; Protein of unknown function (DUF2722) [PF10846.10, score=20.4]; Pleckstrin homology domain [PF15413.8, score=19.2]} {Human: ENSG00000117859, OSBPL9, oxysterol binding protein like 9, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000028559, Osbpl9, oxysterol binding protein-like 9, [RH, Score=642, Expect=0.0]} {Dmel: FBgn0033463, CG1513, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [RH, Score=458, Expect=2e-150]} {Smed: dd_Smed_v6_5947_0_1, dd_Smed_v6_5947_0_1, [RH, Score=602, Expect=0.0]} {RNA1509_43844, RNA1509_8406} {RNA1310_2180.1, RNA1509_43844, RNA1509_8406} {RNA1509_43844, RNA1509_8406, RNA815_7482.1}

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