M. lignano Tomo-Seq
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Results for MligTC455_45447

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45447 448 9.32 Mlig455_058767

Neo: -

Age: logFC(26M/2M)=-0.553

 ZNF330 Mlig455_058767 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: NOA36 protein [PF06524.14, score=468.2]} {Human: ENSG00000109445, ZNF330, zinc finger protein 330, [RH, Score=354, Expect=3e-122]} {Mouse: ENSMUSG00000031711, Zfp330, zinc finger protein 330, [RH, Score=357, Expect=1e-123]} {Dmel: FBgn0026400, Noa36, [RH, Score=367, Expect=9e-128]} {Smed: dd_Smed_v6_6139_0_1, dd_Smed_v6_6139_0_1, [RH, Score=367, Expect=6e-128]} {RNA1509_6034} {RNA1310_22107.1} {RNA815_8837}

Cumulative graph for MligTC455_45447

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.941 3.61 0.37517 1.00000
RegionR2 1.063 3.61 0.06772 0.31613
RegionR3 0.378 3.61 0.37940 0.91185
RegionR4 -1.437 3.61 0.00874 0.05515
RegionR5 0.529 3.61 0.16408 0.42825
RegionR6 0.293 3.61 0.51341 1.00000
RegionR7 1.256 3.61 0.01273 0.19910
RegionR8 -1.141 3.61 0.22199 0.82993

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.431 3.61 0.85647 1.00000
RegenerationR2 -0.68 3.61 0.23445 0.68196
RegenerationR3 0.067 3.61 0.90137 1.00000
RegenerationR4 -0.013 3.61 0.98581 1.00000
RegenerationR5 -0.719 3.61 0.16420 0.58925
RegenerationR6 0.388 3.61 0.49102 0.79971
RegenerationBL 0.3 3.61 0.71244 1.00000
RegenerationTP 0.848 3.61 0.27530 0.72301


Genes with expression patterns similar to MligTC455_45447

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45447 448 9.32 Mlig455_058767

Neo: -

Age: logFC(26M/2M)=-0.553

 ZNF330 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_058767 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: NOA36 protein [PF06524.14, score=468.2]} {Human: ENSG00000109445, ZNF330, zinc finger protein 330, [RH, Score=354, Expect=3e-122]} {Mouse: ENSMUSG00000031711, Zfp330, zinc finger protein 330, [RH, Score=357, Expect=1e-123]} {Dmel: FBgn0026400, Noa36, [RH, Score=367, Expect=9e-128]} {Smed: dd_Smed_v6_6139_0_1, dd_Smed_v6_6139_0_1, [RH, Score=367, Expect=6e-128]} {RNA1509_6034} {RNA1310_22107.1} {RNA815_8837}
2. MligTC455_45446 874 18.22 Mlig455_003759, Mlig455_056127

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.732

 ZNF330 5.839 0.996 0.995 0.995 0.996 0.890 0.967

Mlig455_003759 {REF} {Length: 2387} {TRANSSPLICED} {Pfam: NOA36 protein [PF06524.14, score=470.1]} {Human: ENSG00000109445, ZNF330, zinc finger protein 330, [RH, Score=357, Expect=2e-123]} {Mouse: ENSMUSG00000031711, Zfp330, zinc finger protein 330, [RH, Score=358, Expect=4e-124]} {Dmel: FBgn0026400, Noa36, [RH, Score=369, Expect=3e-128]} {Smed: dd_Smed_v6_6139_0_1, dd_Smed_v6_6139_0_1, [RH, Score=366, Expect=1e-127]} {RNA1509_6034} {RNA1310_22107.1, RNA1509_6034} {RNA1509_6034, RNA815_8837}

Mlig455_056127 {REF} {Length: 2481} {TRANSSPLICED} {Pfam: NOA36 protein [PF06524.14, score=470.1]} {Human: ENSG00000109445, ZNF330, zinc finger protein 330, [RH, Score=357, Expect=2e-123]} {Mouse: ENSMUSG00000031711, Zfp330, zinc finger protein 330, [RH, Score=358, Expect=4e-124]} {Dmel: FBgn0026400, Noa36, [RH, Score=369, Expect=3e-128]} {Smed: dd_Smed_v6_6139_0_1, dd_Smed_v6_6139_0_1, [RH, Score=366, Expect=1e-127]} {RNA1509_6034} {RNA1310_22107.1} {RNA815_8837}
3. MligTC455_18797 571 11.9 Mlig455_045929

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.349

 PYURF 1.669 - - - - 0.713 0.956 Mlig455_045929 {REF} {Length: 988} {TRANSSPLICED} {Human: ENSG00000145337, PYURF, PIGY upstream reading frame, [RH, Score=47.8, Expect=1e-07]} {Mouse: ENSMUSG00000043162, Pyurf, Pigy upstream reading frame, [RH, Score=51.6, Expect=3e-09]} {RNA1509_33808, RNA1509_39301} {RNA1310_70470, RNA1509_33808, RNA1509_39301} {RNA1509_33808, RNA1509_39301, RNA815_15588}
4. MligTC455_12450 325 6.76 Mlig455_057586

Neo: Int S/G2/M

Age: -

 0.975 - - - - - 0.975 Mlig455_057586 {REF} {Length: 1106} {NoTransDecoderORF} {RNA1509_10133} {RNA1310_7734.3} {RNA815_24501}
5. MligTC455_22849 256 5.34 Mlig455_031095

Neo: -

Age: Down-Up-Up

Regeneration-enriched BL: 4.292
Regeneration-enriched R5: 2.530

 0.968 - - - 0.968 - - Mlig455_031095 {REF} {Length: 1726} {Smed: dd_Smed_v6_7191_0_1, dd_Smed_v6_7191_0_1, [RH, Score=117, Expect=1e-28]} {RNA1509_36152} {RNA1310_7995} {RNA815_32401}
6. MligTC455_14347 395 8.24 Mlig455_049858

Neo: -

Age: Up-Up-Down

 0.96 - - - - - 0.960 Mlig455_049858 {REF} {Length: 1083} {NoTransDecoderORF} {RNA1509_24589} {RNA1310_17334.1} {RNA815_7422.2}
7. MligTC455_17846 62 1.29 Mlig455_022452

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_022452 {REF} {Length: 2011} {Pfam: Innexin [PF00876.20, score=21.5]} {RNA1310_55410}
8. MligTC455_43677 15852 330.25 Mlig455_038801, Mlig455_038817

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.008/0.00001

Regeneration-upregulated BL: 1.268

Regeneration-enriched BL: 1.268

 CCT5 0.952 - - - 0.952 - -

Mlig455_038801 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=509.4]} {Human: ENSG00000150753, CCT5, chaperonin containing TCP1 subunit 5, [RH, Score=807, Expect=0.0]} {Mouse: ENSMUSG00000022234, Cct5, chaperonin containing Tcp1, subunit 5 (epsilon), [RH, Score=806, Expect=0.0]} {Dmel: FBgn0010621, CCT5, Chaperonin containing TCP1 subunit 5, [RH, Score=786, Expect=0.0]} {Celegans: WBGene00000380, cct-5, T-complex protein 1 subunit epsilon, [RH, Score=740, Expect=0.0]} {Smed: dd_Smed_v6_544_0_1, dd_Smed_v6_544_0_1, [RH, Score=845, Expect=0.0]} {RNA1509_4389} {RNA1310_11025} {RNA815_4101.1}

Mlig455_038817 {REF} {Length: 2181} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=509.4]} {Human: ENSG00000150753, CCT5, chaperonin containing TCP1 subunit 5, [RH, Score=806, Expect=0.0]} {Mouse: ENSMUSG00000022234, Cct5, chaperonin containing Tcp1, subunit 5 (epsilon), [RH, Score=806, Expect=0.0]} {Dmel: FBgn0010621, CCT5, Chaperonin containing TCP1 subunit 5, [RH, Score=786, Expect=0.0]} {Celegans: WBGene00000380, cct-5, T-complex protein 1 subunit epsilon, [RH, Score=742, Expect=0.0]} {Smed: dd_Smed_v6_544_0_1, dd_Smed_v6_544_0_1, [RH, Score=845, Expect=0.0]} {RNA1509_4389, RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915} {RNA1310_11025, RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915} {RNA1509_4706, RNA1509_5935, RNA1509_7478, RNA1509_7915, RNA815_4101.1}

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