Data search
Results for MligTC455_12643
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12643 | 472 | 9.83 | Mlig455_039318 | Neo: - Age: - |
MAOA | Mlig455_039318 {REF} {Length: 2576} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=152.1]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=39.4]; FAD dependent oxidoreductase [PF01266.26, score=21.6]; Lycopene cyclase protein [PF05834.14, score=20.1]; FAD binding domain [PF00890.26, score=17.8]} {Human: ENSG00000189221, MAOA, monoamine oxidase A, [Score=183, Expect=5e-51]} {Mouse: ENSMUSG00000025037, Maoa, monoamine oxidase A, [Score=181, Expect=1e-50]} {Dmel: FBgn0035943, CG5653, [Score=50.8, Expect=2e-06]} {Celegans: WBGene00000138, amx-2, AMine oXidase family, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_7098_0_2, dd_Smed_v6_7098_0_2, [Score=273, Expect=9e-86]} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1310_19101, RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918, RNA815_8501} |
Cumulative graph for MligTC455_12643
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.216 | 3.768 | 0.09022 | 0.64623 | |
| RegionR2 | 1.246 | 3.768 | 0.02545 | 0.17868 | |
| RegionR3 | 1.234 | 3.768 | 0.00406 | 0.08272 | |
| RegionR4 | 0.135 | 3.768 | 0.78014 | 1.00000 | |
| RegionR5 | 0.66 | 3.768 | 0.10247 | 0.31004 | |
| RegionR6 | 0.596 | 3.768 | 0.19489 | 0.76332 | |
| RegionR7 | -0.175 | 3.768 | 0.75226 | 1.00000 | |
| RegionR8 | -1.48 | 3.768 | 0.06791 | 0.50142 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.881 | 3.768 | 0.37333 | 1.00000 | |
| RegenerationR2 | -0.672 | 3.768 | 0.15970 | 0.59655 | |
| RegenerationR3 | -0.244 | 3.768 | 0.62478 | 0.91790 | |
| RegenerationR4 | 0.413 | 3.768 | 0.43086 | 0.83080 | |
| RegenerationR5 | 0.347 | 3.768 | 0.45634 | 0.83421 | |
| RegenerationR6 | -0.021 | 3.768 | 0.96830 | 1.00000 | |
| RegenerationBL | 0.007 | 3.768 | 0.99782 | 1.00000 | |
| RegenerationTP | 1.313 | 3.768 | 0.06737 | 0.41744 |
Genes with expression patterns similar to MligTC455_12643
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12643 | 472 | 9.83 | Mlig455_039318 | Neo: - Age: - |
MAOA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039318 {REF} {Length: 2576} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=152.1]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=39.4]; FAD dependent oxidoreductase [PF01266.26, score=21.6]; Lycopene cyclase protein [PF05834.14, score=20.1]; FAD binding domain [PF00890.26, score=17.8]} {Human: ENSG00000189221, MAOA, monoamine oxidase A, [Score=183, Expect=5e-51]} {Mouse: ENSMUSG00000025037, Maoa, monoamine oxidase A, [Score=181, Expect=1e-50]} {Dmel: FBgn0035943, CG5653, [Score=50.8, Expect=2e-06]} {Celegans: WBGene00000138, amx-2, AMine oXidase family, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_7098_0_2, dd_Smed_v6_7098_0_2, [Score=273, Expect=9e-86]} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1310_19101, RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918, RNA815_8501} |
| 2. | MligTC455_48563 | 681 | 14.19 | Mlig455_050412 | Neo: - Age: Up-Up-Down |
ABHD4 | 1.858 | - | - | - | 0.982 | - | 0.876 | Mlig455_050412 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=64.2]; alpha/beta hydrolase fold [PF00561.22, score=61.1]; Serine aminopeptidase, S33 [PF12146.10, score=33.6]} {Human: ENSG00000100439, ABHD4, abhydrolase domain containing 4, [Score=237, Expect=1e-74]} {Mouse: ENSMUSG00000040997, Abhd4, abhydrolase domain containing 4, [Score=237, Expect=1e-74]} {Dmel: FBgn0033226, CG1882, [Score=204, Expect=7e-62]} {Celegans: WBGene00016507, abhd-5.2, ABHydrolase Domain containing homolog, [Score=194, Expect=2e-57]} {Smed: dd_Smed_v6_3165_0_1, dd_Smed_v6_3165_0_1, [RH, Score=238, Expect=3e-75]} {RNA1509_54158} {RNA1310_7532.1} {RNA815_18636.1} |
| 3. | MligTC455_27743 | 1122 | 23.38 | Mlig455_020774 | Neo: Germline Age: logFC(26M/2M)=0.403 Region-specific R5: 3.477 Region-enriched R5: 3.068/0.00000 |
TMED3 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_020774 {REF} {Length: 1851} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.5]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=76.6, Expect=2e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=75.9, Expect=4e-15]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=76.6, Expect=1e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=75.1, Expect=4e-15]} {Dmel: FBgn0051787, CG31787, [RH, Score=76.3, Expect=2e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=85.5, Expect=1e-18]} {RNA1509_20798} {RNA1310_17461, RNA1509_20798} {RNA1509_20798, RNA815_5363} |
| 4. | MligTC455_31514 | 4359 | 90.81 | Mlig455_031839 | Neo: - Age: logFC(26M/2M)=-0.154 |
ACO2 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_031839 {REF} {Length: 3664} {TRANSSPLICED} {Pfam: Aconitase family (aconitate hydratase) [PF00330.22, score=511.8]; Aconitase C-terminal domain [PF00694.21, score=145.7]} {Human: ENSG00000100412, ACO2, aconitase 2, [RH, Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000022477, Aco2, aconitase 2, mitochondrial, [RH, Score=1151, Expect=0.0]} {Dmel: FBgn0010100, Acon, Aconitase, [RH, Score=1150, Expect=0.0]} {Celegans: WBGene00000041, aco-2, Probable aconitate hydratase, mitochondrial, [RH, Score=1148, Expect=0.0]} {Smed: dd_Smed_v6_979_0_1, dd_Smed_v6_979_0_1, [RH, Score=1154, Expect=0.0]} {RNA1509_2297, RNA1509_349} {RNA1310_3217.1, RNA1509_2297, RNA1509_349} {RNA1509_2297, RNA1509_349, RNA815_1749} |
| 5. | MligTC455_39553 | 478 | 9.95 | Mlig455_069570 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.662/0.00444 |
B3GNT5 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_069570 {REF} {Length: 3770} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=125.3]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [RH, Score=130, Expect=3e-33]; ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [RH, Score=124, Expect=6e-31]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=118, Expect=6e-29]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=117, Expect=1e-28]; ENSMUSG00000022686, B3gnt5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=114, Expect=1e-27]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=113, Expect=1e-27]} {Dmel: FBgn0000221, brn, brainiac, [Score=133, Expect=3e-35]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_8163_0_1, dd_Smed_v6_8163_0_1, [RH, Score=243, Expect=4e-76]} {RNA1509_8889} {RNA1310_13743.1} {RNA815_1518.2} |
| 6. | MligTC455_19475 | 282 | 5.87 | Mlig455_069236 | Neo: - Age: - |
SLC46A1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_069236 {REF} {Length: 2839} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=49.1]} {Human: ENSG00000076351, SLC46A1, solute carrier family 46 member 1, [Score=132, Expect=5e-33]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=144, Expect=5e-37]} {Dmel: FBgn0050344, CG30344, [RH, Score=79.7, Expect=2e-15]} {Celegans: WBGene00009582, F40F9.5, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_9814_0_1, dd_Smed_v6_9814_0_1, [RH, Score=185, Expect=2e-52]} {RNA1509_21682, RNA1509_38894, RNA1509_9873} {RNA1310_11871, RNA1509_21682, RNA1509_38894, RNA1509_9873} {RNA1509_21682, RNA1509_38894, RNA1509_9873, RNA815_3733} |
| 7. | MligTC455_39784 | 616 | 12.84 | Mlig455_060653 | Neo: - Age: - Region-enriched R4: 1.436/0.01220 |
SHANK3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_060653 {REF} {Length: 6242} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=78.0]; Ankyrin repeats (3 copies) [PF12796.9, score=73.7]; Ankyrin repeats (many copies) [PF13857.8, score=55.6]; Ankyrin repeat [PF00023.32, score=47.3]; Ankyrin repeat [PF13606.8, score=41.5]; PDZ domain [PF00595.26, score=40.5]; PDZ domain [PF17820.3, score=37.5]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=22.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=6e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=5e-103]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=344, Expect=4e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=354, Expect=9e-102]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=341, Expect=2e-97]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=340, Expect=6e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=392, Expect=1e-114]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=318, Expect=2e-92]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=425, Expect=2e-132]} {RNA1509_29923, RNA1509_5286} {RNA1310_5766, RNA1509_29923} {RNA1509_29923, RNA815_2909} |
| 8. | MligTC455_19915 | 328 | 6.84 | Mlig455_018044 | Neo: Int S/G2/M Age: - |
KLHL13 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_018044 {REF} {Length: 3003} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=106.5]; BTB/POZ domain [PF00651.33, score=96.6]; Kelch motif [PF13964.8, score=82.4]; Galactose oxidase, central domain [PF13415.8, score=60.5]; BTB And C-terminal Kelch [PF07707.17, score=42.6]; Galactose oxidase, central domain [PF13418.8, score=40.8]; Kelch motif [PF13854.8, score=39.6]; Kelch motif [PF07646.17, score=32.8]} {Human: ENSG00000003096, KLHL13, kelch like family member 13, [RH, Score=310, Expect=7e-96]; ENSG00000198642, KLHL9, kelch like family member 9, [RH, Score=308, Expect=1e-95]; ENSG00000167487, KLHL26, kelch like family member 26, [RH, Score=301, Expect=1e-92]} {Mouse: ENSMUSG00000070923, Klhl9, kelch-like 9, [RH, Score=311, Expect=9e-97]; ENSMUSG00000036782, Klhl13, kelch-like 13, [RH, Score=306, Expect=3e-95]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=156, Expect=3e-40]} {Celegans: WBGene00020030, R12E2.1, [Score=167, Expect=4e-44]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [Score=138, Expect=3e-34]} {RNA1509_15361} {RNA1310_4853.1, RNA1509_15361} {RNA1509_15361, RNA815_5001} |
| 9. | MligTC455_19134 | 368 | 7.66 | Mlig455_050531 | Neo: - Age: - Region-enriched R5: 1.166/0.02712 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_050531 {REF} {Length: 1504} {RNA1509_14961} {RNA1310_60687} {RNA815_7440.1} | |
| 10. | MligTC455_37782 | 4491 | 93.57 | Mlig455_031521 | Neo: - Age: logFC(26M/2M)=-0.699 |
PSMB2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_031521 {REF} {Length: 1540} {Pfam: Proteasome subunit [PF00227.28, score=67.1]} {Human: ENSG00000126067, PSMB2, proteasome subunit beta 2, [Score=101, Expect=4e-27]} {Mouse: ENSMUSG00000028837, Psmb2, proteasome (prosome, macropain) subunit, beta type 2, [Score=101, Expect=3e-27]} {Dmel: FBgn0032596, Prosbeta4, Proteasome beta4 subunit, [Score=93.6, Expect=2e-24]} {Celegans: WBGene00003950, pbs-4, Proteasome subunit beta type-2, [Score=55.1, Expect=9e-10]} {Smed: dd_Smed_v6_2477_0_1, dd_Smed_v6_2477_0_1, [Score=106, Expect=2e-29]} {RNA1509_9739} {RNA1310_29852.1} {RNA815_12817.1} |
| 11. | MligTC455_30665 | 1011 | 21.06 | Mlig455_035414 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.994 Region-enriched R3: 2.264/0.00009 |
PTPRJ | 0.95 | - | - | - | 0.950 | - | - | Mlig455_035414 {REF} {Length: 7812} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=221.9]; Fibronectin type III domain [PF00041.23, score=166.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.4]; ARID/BRIGHT DNA binding domain [PF01388.23, score=20.4]} {Human: ENSG00000149177, PTPRJ, protein tyrosine phosphatase, receptor type J, [Score=189, Expect=1e-47]; ENSG00000127329, PTPRB, protein tyrosine phosphatase, receptor type B, [Score=187, Expect=7e-47]; ENSG00000081237, PTPRC, protein tyrosine phosphatase, receptor type C, [Score=186, Expect=7e-47]; ENSG00000080031, PTPRH, protein tyrosine phosphatase, receptor type H, [Score=185, Expect=1e-46]; ENSG00000105426, PTPRS, protein tyrosine phosphatase, receptor type S, [Score=181, Expect=5e-45]; ENSG00000151490, PTPRO, protein tyrosine phosphatase, receptor type O, [Score=180, Expect=4e-45]} {Mouse: ENSMUSG00000026395, Ptprc, protein tyrosine phosphatase, receptor type, C, [Score=189, Expect=9e-48]; ENSMUSG00000025314, Ptprj, protein tyrosine phosphatase, receptor type, J, [Score=186, Expect=4e-47]; ENSMUSG00000035429, Ptprh, protein tyrosine phosphatase, receptor type, H, [Score=181, Expect=6e-46]; ENSMUSG00000020154, Ptprb, protein tyrosine phosphatase, receptor type, B, [Score=180, Expect=7e-45]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=169, Expect=3e-42]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=173, Expect=2e-46]} {Smed: dd_Smed_v6_768_0_1, dd_Smed_v6_768_0_1, [RH, Score=201, Expect=8e-52]} {RNA1509_34558, RNA1509_50479, RNA1509_58370} {RNA1310_3303.1, RNA1509_34558, RNA1509_50479, RNA1509_58370} {RNA1509_34558, RNA1509_50479, RNA1509_58370, RNA815_718.1} |
Berezikov Lab - 2020-2021 © ERIBA