Data search
Results for MligTC455_39784
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39784 | 616 | 12.84 | Mlig455_060653 | Neo: - Age: - Region-enriched R4: 1.436/0.01220 |
SHANK3 | Mlig455_060653 {REF} {Length: 6242} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=78.0]; Ankyrin repeats (3 copies) [PF12796.9, score=73.7]; Ankyrin repeats (many copies) [PF13857.8, score=55.6]; Ankyrin repeat [PF00023.32, score=47.3]; Ankyrin repeat [PF13606.8, score=41.5]; PDZ domain [PF00595.26, score=40.5]; PDZ domain [PF17820.3, score=37.5]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=22.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=6e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=5e-103]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=344, Expect=4e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=354, Expect=9e-102]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=341, Expect=2e-97]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=340, Expect=6e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=392, Expect=1e-114]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=318, Expect=2e-92]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=425, Expect=2e-132]} {RNA1509_29923, RNA1509_5286} {RNA1310_5766, RNA1509_29923} {RNA1509_29923, RNA815_2909} |
Cumulative graph for MligTC455_39784
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.719 | 4.094 | 0.55645 | 1.00000 | |
| RegionR2 | -0.824 | 4.094 | 0.09399 | 0.37597 | |
| RegionR3 | 0.573 | 4.094 | 0.11249 | 0.58361 | |
| RegionR4 | 1.436 | 4.094 | 0.00123 | 0.01220 | |
| RegionR5 | 0.357 | 4.094 | 0.30194 | 0.63777 | |
| RegionR6 | 0.256 | 4.094 | 0.50371 | 1.00000 | |
| RegionR7 | -0.253 | 4.094 | 0.61496 | 1.00000 | |
| RegionR8 | -0.827 | 4.094 | 0.19727 | 0.79377 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.28 | 4.094 | 0.18263 | 0.92312 | |
| RegenerationR2 | 0.042 | 4.094 | 0.91828 | 1.00000 | |
| RegenerationR3 | -0.613 | 4.094 | 0.13450 | 0.55807 | |
| RegenerationR4 | -0.739 | 4.094 | 0.09257 | 0.47475 | |
| RegenerationR5 | -0.177 | 4.094 | 0.64786 | 0.93143 | |
| RegenerationR6 | 0.166 | 4.094 | 0.68853 | 0.91809 | |
| RegenerationBL | 0.402 | 4.094 | 0.42737 | 0.79545 | |
| RegenerationTP | -0.471 | 4.094 | 0.44980 | 0.86708 |
Genes with expression patterns similar to MligTC455_39784
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39784 | 616 | 12.84 | Mlig455_060653 | Neo: - Age: - Region-enriched R4: 1.436/0.01220 |
SHANK3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060653 {REF} {Length: 6242} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=78.0]; Ankyrin repeats (3 copies) [PF12796.9, score=73.7]; Ankyrin repeats (many copies) [PF13857.8, score=55.6]; Ankyrin repeat [PF00023.32, score=47.3]; Ankyrin repeat [PF13606.8, score=41.5]; PDZ domain [PF00595.26, score=40.5]; PDZ domain [PF17820.3, score=37.5]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=22.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=6e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=358, Expect=5e-103]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=344, Expect=4e-98]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=354, Expect=9e-102]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=341, Expect=2e-97]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=340, Expect=6e-97]} {Dmel: FBgn0040752, Prosap, [RH, Score=392, Expect=1e-114]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=318, Expect=2e-92]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=425, Expect=2e-132]} {RNA1509_29923, RNA1509_5286} {RNA1310_5766, RNA1509_29923} {RNA1509_29923, RNA815_2909} |
| 2. | MligTC455_45365 | 1938 | 40.36 | Mlig455_040107 | Neo: - Age: - Region-enriched R4: 1.346/0.00006 |
GANAB | 1.81 | - | - | - | 0.835 | 0.975 | - | Mlig455_040107 {REF} {Length: 4729} {Pfam: Glycosyl hydrolases family 31 [PF01055.28, score=482.8]; Galactose mutarotase-like [PF13802.8, score=93.4]} {Human: ENSG00000089597, GANAB, glucosidase II alpha subunit, [RH, Score=800, Expect=0.0]} {Mouse: ENSMUSG00000071650, Ganab, alpha glucosidase 2 alpha neutral subunit, [RH, Score=802, Expect=0.0]} {Dmel: FBgn0027588, GCS2alpha, Glucosidase 2 alpha subunit, [RH, Score=708, Expect=0.0]} {Celegans: WBGene00018682, aagr-4, Acid Alpha Glucosidase Relate, [RH, Score=703, Expect=0.0]} {Smed: dd_Smed_v6_1707_0_1, dd_Smed_v6_1707_0_1, [RH, Score=877, Expect=0.0]} {RNA1509_3784} {RNA1310_5429} {RNA815_325} |
| 3. | MligTC455_50470 | 488 | 10.16 | Mlig455_020809 | Neo: Int S/G2/M Age: - |
POLR2C | 1.705 | - | - | - | 0.741 | 0.964 | - | Mlig455_020809 {REF} {Length: 2338} {TRANSSPLICED} {Pfam: RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=121.0]; RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=67.5]} {Human: ENSG00000102978, POLR2C, RNA polymerase II subunit C, [RH, Score=374, Expect=5e-131]} {Mouse: ENSMUSG00000031783, Polr2c, polymerase (RNA) II (DNA directed) polypeptide C, [RH, Score=376, Expect=4e-132]} {Dmel: FBgn0026373, RpII33, RNA polymerase II 33kD subunit, [RH, Score=355, Expect=5e-124]} {Celegans: WBGene00007971, rpb-3, RNA Polymerase II (B) subunit, [RH, Score=315, Expect=3e-108]} {Smed: dd_Smed_v6_4346_0_1, dd_Smed_v6_4346_0_1, [RH, Score=318, Expect=1e-109]} {RNA1509_11618, RNA1509_23767} {RNA1310_31465, RNA1509_11618, RNA1509_23767} {RNA1509_11618, RNA1509_23767, RNA815_15387} |
| 4. | MligTC455_12643 | 472 | 9.83 | Mlig455_039318 | Neo: - Age: - |
MAOA | 0.957 | - | - | - | - | - | 0.957 | Mlig455_039318 {REF} {Length: 2576} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=152.1]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=39.4]; FAD dependent oxidoreductase [PF01266.26, score=21.6]; Lycopene cyclase protein [PF05834.14, score=20.1]; FAD binding domain [PF00890.26, score=17.8]} {Human: ENSG00000189221, MAOA, monoamine oxidase A, [Score=183, Expect=5e-51]} {Mouse: ENSMUSG00000025037, Maoa, monoamine oxidase A, [Score=181, Expect=1e-50]} {Dmel: FBgn0035943, CG5653, [Score=50.8, Expect=2e-06]} {Celegans: WBGene00000138, amx-2, AMine oXidase family, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_7098_0_2, dd_Smed_v6_7098_0_2, [Score=273, Expect=9e-86]} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1310_19101, RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918} {RNA1509_37135, RNA1509_42140, RNA1509_55781, RNA1509_8918, RNA815_8501} |
| 5. | MligTC455_53536 | 6320 | 131.67 | Mlig455_046722, Mlig455_046837, Mlig455_046844 | Neo: - Age: logFC(26M/2M)=0.195 Regeneration-upregulated BL: 2.033 Regeneration-enriched BL: 2.033 |
HNRNPH1, HNRNPH2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_046722 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=111.4]} {Human: ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=5e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=132, Expect=7e-33]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=112, Expect=3e-27]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405} Mlig455_046837 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.3]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=4e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1, RNA1509_3891} {RNA1509_3891, RNA815_3405} Mlig455_046844 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]} {Human: ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=224, Expect=3e-67]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=219, Expect=7e-66]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=228, Expect=7e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=2e-67]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=220, Expect=4e-66]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=2e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405} |
| 6. | MligTC455_40179 | 405 | 8.43 | Mlig455_003559 | Neo: Int S/G2/M Age: - |
SRFBP1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_003559 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: BUD22 [PF09073.12, score=34.6]} {Human: ENSG00000151304, SRFBP1, serum response factor binding protein 1, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_9477_0_1, dd_Smed_v6_9477_0_1, [Score=46.6, Expect=1e-05]} {RNA1509_28746} {RNA1310_17756, RNA1509_28746} {RNA1509_28746, RNA815_1312.1} |
| 7. | MligTC455_41147 | 2671 | 55.65 | Mlig455_031647 | Neo: Neoblast Age: - Regeneration-enriched BL: 1.690 |
HNRNPL | 0.952 | - | - | - | - | 0.952 | - | Mlig455_031647 {REF} {Length: 3303} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=111.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=78.4]; Occluded RNA-recognition motif [PF16842.7, score=39.0]; RRM-like domain [PF11835.10, score=26.0]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=206, Expect=5e-59]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=206, Expect=5e-59]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=204, Expect=1e-57]} {Dmel: FBgn0003435, sm, smooth, [Score=182, Expect=1e-50]} {Celegans: WBGene00016624, C44B7.2, [Score=157, Expect=2e-41]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=128, Expect=1e-31]} {RNA1509_14865, RNA1509_15213, RNA1509_3354, RNA1509_50536, RNA1509_7103} {RNA1310_5751.1, RNA1509_14865, RNA1509_15213, RNA1509_3354, RNA1509_50536, RNA1509_7103} {RNA1509_14865, RNA1509_15213, RNA1509_3354, RNA1509_50536, RNA1509_7103, RNA815_5809} |