Data search
Results for MligTC455_12713
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12713 | 64 | 1.33 | Mlig455_012819 | Neo: - Age: - |
ESRRB | Mlig455_012819 {REF} {Length: 1934} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=82.5]} {Human: ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=99.8, Expect=2e-22]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=97.4, Expect=8e-22]; ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=95.1, Expect=8e-21]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=99.4, Expect=2e-22]; ENSMUSG00000032292, Nr2e3, nuclear receptor subfamily 2, group E, member 3, [Score=97.8, Expect=3e-22]; ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=95.5, Expect=3e-21]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=95.1, Expect=4e-21]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=95.5, Expect=3e-21]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=94.4, Expect=3e-22]} {Smed: dd_Smed_v6_33286_0_1, dd_Smed_v6_33286_0_1, [Score=93.6, Expect=8e-21]} {RNA1310_16051} {RNA815_33205} |
Cumulative graph for MligTC455_12713
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.341 | 1.565 | 0.23662 | 0.88078 | |
| RegionR2 | 0.046 | 1.565 | 0.75230 | 1.00000 | |
| RegionR3 | 1.196 | 1.565 | 0.15393 | 0.66350 | |
| RegionR4 | 0.103 | 1.565 | 0.73413 | 1.00000 | |
| RegionR5 | 0.108 | 1.565 | 0.70598 | 1.00000 | |
| RegionR6 | 0.054 | 1.565 | 0.74368 | 1.00000 | |
| RegionR7 | -4.544 | 1.565 | 0.07953 | 0.54462 | |
| RegionR8 | 0.697 | 1.565 | 0.56763 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.011 | 1.565 | 0.24456 | 0.96633 | |
| RegenerationR2 | 0.228 | 1.565 | 0.76953 | 0.98018 | |
| RegenerationR3 | -0.208 | 1.565 | 0.79879 | 0.98230 | |
| RegenerationR4 | 0.059 | 1.565 | 0.93968 | 1.00000 | |
| RegenerationR5 | 0.343 | 1.565 | 0.67776 | 0.94359 | |
| RegenerationR6 | 0.619 | 1.565 | 0.52680 | 0.82471 | |
| RegenerationBL | -3.046 | 1.565 | 0.99981 | 1.00000 | |
| RegenerationTP | 1.691 | 1.565 | 0.37043 | 0.80815 |
Genes with expression patterns similar to MligTC455_12713
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12713 | 64 | 1.33 | Mlig455_012819 | Neo: - Age: - |
ESRRB | 5 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012819 {REF} {Length: 1934} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=82.5]} {Human: ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=99.8, Expect=2e-22]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=97.4, Expect=8e-22]; ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=95.1, Expect=8e-21]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=99.4, Expect=2e-22]; ENSMUSG00000032292, Nr2e3, nuclear receptor subfamily 2, group E, member 3, [Score=97.8, Expect=3e-22]; ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=95.5, Expect=3e-21]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=95.1, Expect=4e-21]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=95.5, Expect=3e-21]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=94.4, Expect=3e-22]} {Smed: dd_Smed_v6_33286_0_1, dd_Smed_v6_33286_0_1, [Score=93.6, Expect=8e-21]} {RNA1310_16051} {RNA815_33205} |
| 2. | MligTC455_13487 | 45 | 0.94 | Mlig455_054842 | Neo: - Age: Up-Down-Up |
SOBP | 1.773 | - | - | 0.811 | - | - | 0.962 | Mlig455_054842 {REF} {Length: 2581} {Human: ENSG00000112320, SOBP, sine oculis binding protein homolog, [RH, Score=61.2, Expect=5e-09]} {Mouse: ENSMUSG00000038248, Sobp, sine oculis binding protein, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0033654, Sobp, Sine oculis-binding protein, [RH, Score=68.2, Expect=2e-11]} {Smed: dd_Smed_v6_31841_0_1, dd_Smed_v6_31841_0_1, [RH, Score=55.1, Expect=7e-08]} {RNA1310_69955} {RNA815_45892} |
| 3. | MligTC455_30247 | 89 | 1.86 | Mlig455_001008 | Neo: - Age: - |
1.76 | - | - | 0.953 | 0.807 | - | - | Mlig455_001008 {REF} {Length: 5705} {Pfam: D5 N terminal like [PF08706.13, score=48.1]; Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.9]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_25300.1} | |
| 4. | MligTC455_37536 | 121 | 2.52 | Mlig455_027686 | Neo: - Age: Up-Down-Down |
KCNC2 | 1.73 | - | - | 0.950 | 0.780 | - | - | Mlig455_027686 {REF} {Length: 4365} {Pfam: Ion transport protein [PF00520.33, score=105.7]; BTB/POZ domain [PF02214.24, score=56.6]; Ion channel [PF07885.18, score=52.3]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=216, Expect=1e-59]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=215, Expect=1e-59]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=206, Expect=3e-56]} {Mouse: ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=3e-60]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=214, Expect=1e-59]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=230, Expect=4e-65]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=211, Expect=8e-59]} {Smed: dd_Smed_v6_9740_0_2, dd_Smed_v6_9740_0_2, [Score=208, Expect=1e-57]} {RNA1509_26535} {RNA1310_14101} {RNA815_34993} |
| 5. | MligTC455_02079 | 56 | 1.17 | Mlig455_057407 | Neo: - Age: Down-Up-Down |
0.957 | - | - | - | 0.957 | - | - | Mlig455_057407 {REF} {Length: 1093} {RNA1310_38425.2} {RNA815_41742} | |
| 6. | MligTC455_09823 | 198 | 4.12 | Mlig455_060176, Mlig455_067096 | Neo: - Age: logFC(26M/2M)=-0.746 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_060176 {REF} {Length: 1969} {RNA1509_16354} {RNA1310_14269} {RNA815_19496} Mlig455_067096 {REF} {Length: 1963} {RNA1509_16354} {RNA1310_14269} {RNA815_19496} |
|
| 7. | MligTC455_19243 | 94 | 1.96 | Mlig455_048214 | Neo: - Age: - Region-enriched R3: 3.438/0.03435 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_048214 {REF} {Length: 2496} {RNA1509_28510} {RNA1310_39619, RNA1509_28510} {RNA1509_28510, RNA815_161} | |
| 8. | MligTC455_38044 | 74 | 1.54 | Mlig455_032408 | Neo: - Age: - |
ANK1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_032408 {REF} {Length: 2038} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=108.2]; Ankyrin repeats (many copies) [PF13857.8, score=75.5]; Ankyrin repeats (many copies) [PF13637.8, score=74.1]; Ankyrin repeat [PF00023.32, score=65.5]; Ankyrin repeat [PF13606.8, score=64.7]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=62.8, Expect=5e-10]; ENSG00000145362, ANK2, ankyrin 2, [Score=61.6, Expect=1e-09]; ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=60.5, Expect=3e-09]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=60.5, Expect=2e-09]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=60.5, Expect=2e-09]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=58.5, Expect=9e-09]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=58.2, Expect=1e-08]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=57.8, Expect=1e-08]} {Dmel: FBgn0039590, CG10011, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_4509_0_1, dd_Smed_v6_4509_0_1, [Score=53.9, Expect=8e-08]} {RNA1509_27731} {RNA1310_30962} {RNA815_23812} |
Berezikov Lab - 2020-2021 © ERIBA