Data search
Results for MligTC455_37536
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_37536 | 121 | 2.52 | Mlig455_027686 | Neo: - Age: Up-Down-Down |
KCNC2 | Mlig455_027686 {REF} {Length: 4365} {Pfam: Ion transport protein [PF00520.33, score=105.7]; BTB/POZ domain [PF02214.24, score=56.6]; Ion channel [PF07885.18, score=52.3]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=216, Expect=1e-59]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=215, Expect=1e-59]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=206, Expect=3e-56]} {Mouse: ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=3e-60]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=214, Expect=1e-59]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=230, Expect=4e-65]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=211, Expect=8e-59]} {Smed: dd_Smed_v6_9740_0_2, dd_Smed_v6_9740_0_2, [Score=208, Expect=1e-57]} {RNA1509_26535} {RNA1310_14101} {RNA815_34993} |
Cumulative graph for MligTC455_37536
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3 | 1.986 | 0.60052 | 1.00000 | |
| RegionR2 | 0.282 | 1.986 | 0.77877 | 1.00000 | |
| RegionR3 | 0.979 | 1.986 | 0.42172 | 0.94482 | |
| RegionR4 | -0.001 | 1.986 | 0.89473 | 1.00000 | |
| RegionR5 | 0.568 | 1.986 | 0.60708 | 0.96435 | |
| RegionR6 | -0.808 | 1.986 | 0.98439 | 1.00000 | |
| RegionR7 | 1.996 | 1.986 | 0.17527 | 0.76860 | |
| RegionR8 | -0.017 | 1.986 | 0.90637 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.85 | 1.986 | 0.36464 | 1.00000 | |
| RegenerationR2 | 1.787 | 1.986 | 0.03620 | 0.31464 | |
| RegenerationR3 | 0.561 | 1.986 | 0.60866 | 0.91196 | |
| RegenerationR4 | 1.272 | 1.986 | 0.23735 | 0.68644 | |
| RegenerationR5 | 1.163 | 1.986 | 0.24640 | 0.67977 | |
| RegenerationR6 | 1.923 | 1.986 | 0.12835 | 0.44030 | |
| RegenerationBL | 1.155 | 1.986 | 0.39514 | 0.76375 | |
| RegenerationTP | 1.325 | 1.986 | 0.38528 | 0.81905 |
Genes with expression patterns similar to MligTC455_37536
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_37536 | 121 | 2.52 | Mlig455_027686 | Neo: - Age: Up-Down-Down |
KCNC2 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027686 {REF} {Length: 4365} {Pfam: Ion transport protein [PF00520.33, score=105.7]; BTB/POZ domain [PF02214.24, score=56.6]; Ion channel [PF07885.18, score=52.3]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=216, Expect=1e-59]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=215, Expect=1e-59]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=206, Expect=3e-56]} {Mouse: ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=3e-60]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=214, Expect=1e-59]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=230, Expect=4e-65]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=211, Expect=8e-59]} {Smed: dd_Smed_v6_9740_0_2, dd_Smed_v6_9740_0_2, [Score=208, Expect=1e-57]} {RNA1509_26535} {RNA1310_14101} {RNA815_34993} |
| 2. | MligTC455_12713 | 64 | 1.33 | Mlig455_012819 | Neo: - Age: - |
ESRRB | 1.73 | - | - | 0.950 | 0.780 | - | - | Mlig455_012819 {REF} {Length: 1934} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=82.5]} {Human: ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=99.8, Expect=2e-22]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=97.4, Expect=8e-22]; ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=95.1, Expect=8e-21]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=99.4, Expect=2e-22]; ENSMUSG00000032292, Nr2e3, nuclear receptor subfamily 2, group E, member 3, [Score=97.8, Expect=3e-22]; ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=95.5, Expect=3e-21]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=95.1, Expect=4e-21]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=95.5, Expect=3e-21]} {Celegans: WBGene00003678, nhr-88, Nuclear Hormone Receptor family, [Score=94.4, Expect=3e-22]} {Smed: dd_Smed_v6_33286_0_1, dd_Smed_v6_33286_0_1, [Score=93.6, Expect=8e-21]} {RNA1310_16051} {RNA815_33205} |
| 3. | MligTC455_41624 | 87 | 1.81 | Mlig455_002642 | Neo: Germline |
0.975 | - | - | - | - | - | 0.975 | Mlig455_002642 {REF} {Length: 1611} {RNA1509_1817} {RNA1310_20922} {RNA815_15306.1} | |
| 4. | MligTC455_40915 | 873 | 18.19 | Mlig455_042099 | Neo: - Age: - |
SLC22A24 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_042099 {REF} {Length: 4000} {Pfam: Sugar (and other) transporter [PF00083.26, score=102.5]; Major Facilitator Superfamily [PF07690.18, score=76.5]} {Human: ENSG00000197658, SLC22A24, solute carrier family 22 member 24, [Score=119, Expect=2e-27]; ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=115, Expect=1e-26]} {Mouse: ENSMUSG00000023828, Slc22a3, solute carrier family 22 (organic cation transporter), member 3, [Score=121, Expect=1e-28]} {Dmel: FBgn0039178, CG6356, [Score=127, Expect=1e-30]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=125, Expect=5e-30]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=85.9, Expect=2e-17]} {RNA1509_14287, RNA1509_8510} {RNA1310_10700.1, RNA1509_14287, RNA1509_8510} {RNA1509_14287, RNA1509_8510, RNA815_2513} |
| 5. | MligTC455_49348 | 106 | 2.22 | Mlig455_042275 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_042275 {REF} {Length: 1278} {NoTransDecoderORF} {RNA1509_58228} {RNA1310_48769.2} {RNA815_29333} | |
| 6. | MligTC455_19194 | 403 | 8.39 | Mlig455_007445 | Neo: - Age: Up-Down-Down |
BFAR | 0.96 | - | - | - | - | - | 0.960 | Mlig455_007445 {REF} {Length: 4108} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=30.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.7]; RING-type zinc-finger [PF13445.8, score=29.4]; Ring finger domain [PF13639.8, score=27.0]; zinc-RING finger domain [PF14634.8, score=25.5]; Prokaryotic RING finger family 4 [PF14447.8, score=22.2]; RING-H2 zinc finger domain [PF12678.9, score=19.9]} {Human: ENSG00000275618, BFAR, bifunctional apoptosis regulator, [RH, Score=48.9, Expect=7e-07]; ENSG00000103429, BFAR, bifunctional apoptosis regulator, [RH, Score=48.9, Expect=7e-07]} {Mouse: ENSMUSG00000022684, Bfar, bifunctional apoptosis regulator, [RH, Score=52.8, Expect=2e-08]; ENSMUSG00000057596, Trim30d, tripartite motif-containing 30D, [RH, Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_10019_0_1, dd_Smed_v6_10019_0_1, [Score=46.2, Expect=2e-06]} {RNA1509_14967, RNA1509_23909, RNA1509_40881, RNA1509_45941, RNA1509_53684} {RNA1310_39360, RNA1509_14967, RNA1509_23909, RNA1509_40881, RNA1509_45941, RNA1509_53684} {RNA1509_14967, RNA1509_23909, RNA1509_40881, RNA1509_45941, RNA1509_53684, RNA815_20181} |
| 7. | MligTC455_18422 | 130 | 2.7 | Mlig455_067743 | Neo: - Age: - |
GGPS1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_067743 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048} {RNA1310_30605, RNA1509_28048} {RNA1509_28048, RNA815_14345} |
| 8. | MligTC455_37682 | 225 | 4.68 | Mlig455_022978, Mlig455_023072 | Neo: - Age: Up-Down-Up Region-enriched R7: 2.657/0.03586 |
KCNN2 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_022978 {REF} {Length: 4236} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=149.3]; Calmodulin binding domain [PF02888.18, score=116.8]; Ion channel [PF07885.18, score=49.6]} {Human: ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [RH, Score=548, Expect=0.0]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [RH, Score=539, Expect=1e-180]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [RH, Score=549, Expect=0.0]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [RH, Score=541, Expect=0.0]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [RH, Score=424, Expect=5e-135]} {Smed: dd_Smed_v6_15620_0_1, dd_Smed_v6_15620_0_1, [RH, Score=572, Expect=0.0]} {RNA1509_28013} {RNA1310_5308.1, RNA1509_28013} {RNA1509_28013, RNA815_7768} Mlig455_023072 {REF} {Length: 3426} {Pfam: Calcium-activated SK potassium channel [PF03530.16, score=149.3]; Calmodulin binding domain [PF02888.18, score=116.0]; Ion channel [PF07885.18, score=49.6]} {Human: ENSG00000080709, KCNN2, potassium calcium-activated channel subfamily N member 2, [RH, Score=534, Expect=3e-177]; ENSG00000143603, KCNN3, potassium calcium-activated channel subfamily N member 3, [RH, Score=525, Expect=2e-175]} {Mouse: ENSMUSG00000054477, Kcnn2, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2, [RH, Score=536, Expect=1e-178]; ENSMUSG00000000794, Kcnn3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, [RH, Score=528, Expect=1e-176]} {Dmel: FBgn0029761, SK, small conductance calcium-activated potassium channel, [RH, Score=627, Expect=0.0]} {Celegans: WBGene00008570, kcnl-2, KCNL-2 variant; KCNN (Potassium K ChaNNel, calcium activated)-Like, [RH, Score=410, Expect=8e-130]} {Smed: dd_Smed_v6_15620_0_1, dd_Smed_v6_15620_0_1, [RH, Score=559, Expect=0.0]} {RNA1509_28013} {RNA1310_5308.1} {RNA815_7768} |
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