TomoSeq data search

Data search

Results for MligTC455_12720

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12720	17	0.36	Mlig455_023405	Neo: - Age: -		Mlig455_023405 {REF} {Length: 1217} {RNA1310_90924}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_12720

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.663	0.696	0.99974	1.00000
RegionR2	4.021	0.696	0.99982	1.00000
RegionR3	0.518	0.696	0.99992	1.00000
RegionR4	-3.461	0.696	0.99984	1.00000
RegionR5	-0.804	0.696	0.99992	1.00000
RegionR6	0.615	0.696	0.99994	1.00000
RegionR7	1.16	0.696	0.99996	1.00000
RegionR8	1.614	0.696	0.99995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.198	0.696	0.99994	1.00000
RegenerationR2	4.022	0.696	0.00193	0.06698
RegenerationR3	5.729	0.696	0.00124	0.05729
RegenerationR4	4.351	0.696	0.00718	0.12343
RegenerationR5	5.726	0.696	0.00023	0.02282
RegenerationR6	4.425	0.696	0.00751	0.10622
RegenerationBL	4.399	0.696	0.01907	0.14894
RegenerationTP	2.967	0.696	0.15619	0.58399

Genes with expression patterns similar to MligTC455_12720

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12720	17	0.36	Mlig455_023405	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_023405 {REF} {Length: 1217} {RNA1310_90924}
2.	MligTC455_46894	109	2.26	Mlig455_017820	Neo: - Age: -	SCRT1	0.981	-	-	-	-	0.981	-	Mlig455_017820 {REF} {Length: 2221} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=84.8]; C2H2-type zinc finger [PF13894.8, score=67.2]; Zinc-finger double domain [PF13465.8, score=60.4]; C2H2-type zinc finger [PF13912.8, score=33.8]; Zinc ribbon domain [PF09723.12, score=21.4]} {Human: ENSG00000261678, SCRT1, scratch family transcriptional repressor 1, [RH, Score=252, Expect=1e-78]; ENSG00000284923, SCRT1, scratch family transcriptional repressor 1, [RH, Score=252, Expect=1e-78]; ENSG00000215397, SCRT2, scratch family transcriptional repressor 2, [RH, Score=247, Expect=2e-77]} {Mouse: ENSMUSG00000048385, Scrt1, scratch family zinc finger 1, [RH, Score=261, Expect=2e-82]; ENSMUSG00000060257, Scrt2, scratch family zinc finger 2, [RH, Score=255, Expect=2e-80]} {Dmel: FBgn0004880, scrt, scratch, [RH, Score=279, Expect=8e-86]} {Celegans: WBGene00000468, ces-1, CES-1; CEll death Specification, [RH, Score=219, Expect=1e-67]} {Smed: dd_Smed_v6_18952_0_1, dd_Smed_v6_18952_0_1, [RH, Score=291, Expect=5e-94]} {RNA1310_21478.1} {RNA815_23567}
3.	MligTC455_24137	21	0.43	Mlig455_032992	Neo: - Age: - Region-enriched R4: 5.384/0.03048		0.979	-	-	-	-	0.979	-	Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
4.	MligTC455_38479	142	2.97	Mlig455_049645, Mlig455_054626	Neo: - Age: Up-Down-Down	CDK19, CDK8	0.975	-	-	-	-	0.975	-	Mlig455_049645 {REF} {Length: 3873} {Pfam: Protein kinase domain [PF00069.27, score=76.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=29.9]} {Human: ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=284, Expect=1e-90]; ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=280, Expect=7e-89]} {Mouse: ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=289, Expect=1e-92]; ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=279, Expect=2e-88]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=273, Expect=4e-87]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=235, Expect=4e-71]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=271, Expect=3e-86]} {RNA1509_51791} {RNA1310_26782.1} {RNA815_30571} Mlig455_054626 {REF} {Length: 4315} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=191.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.7]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=473, Expect=2e-162]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=470, Expect=7e-162]} {Mouse: ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=471, Expect=2e-162]; ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=471, Expect=4e-162]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=462, Expect=4e-159]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=417, Expect=9e-140]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=449, Expect=3e-154]} {RNA1509_29840} {RNA1310_20139, RNA1509_29840} {RNA1509_29840, RNA815_12999}
5.	MligTC455_20174	71	1.47	Mlig455_007389	Neo: - Age: -	HMCN2	0.973	-	-	-	-	0.973	-	Mlig455_007389 {REF} {Length: 4803} {Pfam: Immunoglobulin domain [PF13927.8, score=197.2]; Immunoglobulin domain [PF13895.8, score=147.3]; Immunoglobulin I-set domain [PF07679.18, score=127.0]; Immunoglobulin domain [PF00047.27, score=110.8]; Immunoglobulin V-set domain [PF07686.19, score=83.9]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=44.3]; Fibronectin type III domain [PF00041.23, score=32.5]; Izumo-like Immunoglobulin domain [PF16706.7, score=29.7]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=27.4]; C17orf99 Ig domain [PF17736.3, score=21.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=137, Expect=8e-32]; ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=132, Expect=2e-30]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=135, Expect=2e-31]} {Dmel: FBgn0000547, ed, echinoid, [Score=207, Expect=6e-54]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=108, Expect=3e-23]} {Smed: dd_Smed_v6_13275_0_1, dd_Smed_v6_13275_0_1, [Score=218, Expect=6e-58]} {RNA1310_41694} {RNA815_44118}
6.	MligTC455_10786	15	0.32	Mlig455_018164	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_018164 {REF} {Length: 1819} {Pfam: F5/8 type C domain [PF00754.27, score=24.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [RH, Score=57.8, Expect=5e-10]} {RNA1310_114361}
7.	MligTC455_33566	27	0.56	Mlig455_041108, Mlig455_057624	Neo: - Age: - Region-enriched R2: 7.159/0.00089	CNBP	0.97	-	-	-	-	0.970	-	Mlig455_041108 {REF} {Length: 2520} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=103.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=78.6]; Integrase zinc binding domain [PF17921.3, score=67.0]; Integrase core domain [PF00665.28, score=45.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]; Zinc knuckle [PF00098.25, score=22.8]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=49.7, Expect=3e-06]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=65.5, Expect=2e-10]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=94.4, Expect=1e-20]} {RNA1509_38544} {RNA1310_2645.1} {RNA815_16906} Mlig455_057624 {REF} {Length: 1616} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.0]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=92.0, Expect=3e-20]} {RNA1509_38544} {RNA1310_2645.1} {RNA815_16906}
8.	MligTC455_11769	31	0.65	Mlig455_037221	Neo: - Age: - Regeneration-enriched R5: 6.907 Regeneration-enriched R2: 5.401	LRRC74A	0.969	-	-	-	-	0.969	-	Mlig455_037221 {REF} {Length: 2742} {Pfam: Leucine Rich repeat [PF13516.8, score=28.7]; Leucine Rich Repeat [PF00560.35, score=21.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=70.5, Expect=1e-12]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=68.9, Expect=2e-12]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [Score=72.0, Expect=1e-13]} {RNA1509_32489} {RNA1310_22966.1} {RNA815_15428}
9.	MligTC455_19756	58	1.21	Mlig455_025331	Neo: - Age: logFC(26M/2M)=0.196		0.969	-	-	-	-	0.969	-	Mlig455_025331 {REF} {Length: 10472} {Pfam: Immunoglobulin domain [PF13895.8, score=27.5]; Immunoglobulin domain [PF13927.8, score=27.3]} {RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842} {RNA1310_5716.1, RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842} {RNA1509_26290, RNA1509_28638, RNA1509_3949, RNA1509_53842, RNA815_5937}
10.	MligTC455_11840	7	0.14	Mlig455_051818	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_051818 {REF} {Length: 2700} {NoTransDecoderORF} {RNA1310_103888} {RNA815_46921}
11.	MligTC455_28356	50	1.03	Mlig455_037254	Neo: - Age: Up-Down-Down		0.966	-	-	-	-	0.966	-	Mlig455_037254 {REF} {Length: 1961} {RNA1509_11960} {RNA1310_11061} {RNA815_18873}
12.	MligTC455_06580	12	0.25	Mlig455_054623	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_054623 {REF} {Length: 827} {RNA1509_23825} {RNA1310_29452} {RNA815_29773.1}
13.	MligTC455_18547	16	0.33	Mlig455_058297	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_058297 {REF} {Length: 647} {NoTransDecoderORF}
14.	MligTC455_22977	22	0.47	Mlig455_009569	Neo: - Age: -	CFAP43	0.964	-	-	-	-	0.964	-	Mlig455_009569 {REF} {Length: 5659} {Human: ENSG00000197748, CFAP43, cilia and flagella associated protein 43, [Score=502, Expect=1e-148]} {Mouse: ENSMUSG00000044948, Cfap43, cilia and flagella associated protein 43, [Score=512, Expect=2e-152]} {Dmel: FBgn0036348, CG17687, [Score=101, Expect=4e-21]} {Smed: dd_Smed_v6_10271_0_2, dd_Smed_v6_10271_0_2, [Score=665, Expect=0.0]} {RNA1509_53795} {RNA1310_1696} {RNA815_196.1}
15.	MligTC455_02544	9	0.19	Mlig455_035271	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_035271 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2609} {RNA1310_34122.1} {RNA815_6796.2}
16.	MligTC455_16312	104	2.17	Mlig455_027412	Neo: - Age: Up-Down-Down		0.961	-	-	-	-	0.961	-	Mlig455_027412 {REF} {Length: 5734} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=166.2]; WSC domain [PF01822.21, score=23.4]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=57.0, Expect=5e-08]} {Smed: dd_Smed_v6_22386_0_1, dd_Smed_v6_22386_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_23395} {RNA1310_12847} {RNA815_3744.1}
17.	MligTC455_46403	73	1.53	Mlig455_020746	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_020746 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_47399.1} {RNA815_38310}
18.	MligTC455_23979	18	0.38	Mlig455_034441	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_034441 {REF} {Length: 2212} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=46.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=34.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=32.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.5]} {Smed: dd_Smed_v6_15884_0_1, dd_Smed_v6_15884_0_1, [Score=73.9, Expect=4e-14]} {RNA1310_70938}
19.	MligTC455_51198	15	0.3	Mlig455_043152	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_043152 {REF} {Length: 2583} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=62.9]} {RNA1310_7738.1} {RNA815_28239}
20.	MligTC455_19125	28	0.59	Mlig455_060303	Neo: - Age: -	NPFFR1	0.955	-	-	-	-	0.955	-	Mlig455_060303 {REF} {Length: 2812} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=114.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.2]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=91.3, Expect=4e-19]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=88.6, Expect=3e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=130, Expect=1e-32]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=7e-23]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=211, Expect=1e-61]} {RNA1509_34547} {RNA1310_9062} {RNA815_6805}
21.	MligTC455_16308	8	0.16	Mlig455_039488	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_039488 {REF} {Length: 2405} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_27324} {RNA815_16253.2}
22.	MligTC455_54212	17	0.35	Mlig455_017834	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_017834 {REF} {Length: 806} {NoTransDecoderORF} {RNA1310_143404}
23.	MligTC455_25734	38	0.78	Mlig455_039452	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_039452 {REF} {Length: 1033} {NoTransDecoderORF} {RNA1509_32652} {RNA1310_131301} {RNA815_5359.1}
24.	MligTC455_05815	11	0.23	Mlig455_045011	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_045011 {REF} {Length: 572} {NoTransDecoderORF} {RNA1310_133647}
25.	MligTC455_18151	12	0.25	Mlig455_006031	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_006031 {REF} {Length: 294} {NoTransDecoderORF} {RNA1509_15424} {RNA1310_41471} {RNA815_56545}
26.	MligTC455_21089	42	0.88	Mlig455_026122, Mlig455_026181	Neo: Germline Age: -		0.95	-	-	-	-	0.950	-	Mlig455_026122 {REF} {Length: 2112} {NoTransDecoderORF} {RNA1310_66824.2} {RNA815_20087} Mlig455_026181 {REF} {Length: 1533} {NoTransDecoderORF} {RNA1310_136548}