TomoSeq data search

Data search

Results for MligTC455_28356

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_28356	50	1.03	Mlig455_037254	Neo: - Age: Up-Down-Down		Mlig455_037254 {REF} {Length: 1961} {RNA1509_11960} {RNA1310_11061} {RNA815_18873}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_28356

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.312	1.399	0.99961	1.00000
RegionR2	0.015	1.399	0.74267	1.00000
RegionR3	1.445	1.399	0.19035	0.72691
RegionR4	3.169	1.399	0.01414	0.07889
RegionR5	0.158	1.399	0.71580	1.00000
RegionR6	2.038	1.399	0.06643	0.48186
RegionR7	-3.81	1.399	1.00000	1.00000
RegionR8	0.296	1.399	0.71668	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.011	1.399	1.00000	1.00000
RegenerationR2	0.437	1.399	0.55865	0.89787
RegenerationR3	-1.203	1.399	0.18570	0.62210
RegenerationR4	-1.555	1.399	0.10721	0.50434
RegenerationR5	1.107	1.399	0.23408	0.66805
RegenerationR6	-1.04	1.399	0.24044	0.58842
RegenerationBL	-1.059	1.399	0.92973	1.00000
RegenerationTP	1.418	1.399	0.45958	0.87358

Genes with expression patterns similar to MligTC455_28356

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28356	50	1.03	Mlig455_037254	Neo: - Age: Up-Down-Down		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_037254 {REF} {Length: 1961} {RNA1509_11960} {RNA1310_11061} {RNA815_18873}
2.	MligTC455_18547	16	0.33	Mlig455_058297	Neo: - Age: -		0.983	-	-	-	-	0.983	-	Mlig455_058297 {REF} {Length: 647} {NoTransDecoderORF}
3.	MligTC455_43177	11	0.22	Mlig455_049065	Neo: - Age: -		0.982	-	-	-	-	0.982	-	Mlig455_049065 {REF} {Length: 1047} {NoTransDecoderORF} {RNA1310_144315}
4.	MligTC455_09356	14	0.29	Mlig455_049750	Neo: - Age: - Regeneration-upregulated R2: 5.695 Regeneration-enriched R2: 5.695		0.975	-	-	-	-	0.975	-	Mlig455_049750 {REF} {Length: 377} {RNA1310_75863}
5.	MligTC455_23653	43	0.89	Mlig455_017999	Neo: Irradiation Age: Down-Down-Down	SPDYC	0.975	-	-	-	-	0.975	-	Mlig455_017999 {REF} {Length: 1728} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112, RNA1509_25393} {RNA1310_23429, RNA1509_25393} {RNA1509_25393, RNA815_28518}
6.	MligTC455_11416	9	0.18	Mlig455_070337	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_070337 {REF} {Length: 3699} {NoTransDecoderORF} {RNA1310_92196} {RNA815_36940}
7.	MligTC455_24137	21	0.43	Mlig455_032992	Neo: - Age: - Region-enriched R4: 5.384/0.03048		0.974	-	-	-	-	0.974	-	Mlig455_032992 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.1]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=82.8, Expect=3e-17]} {RNA1509_53407, RNA1509_59006} {RNA1310_19264, RNA1509_59006} {RNA1509_59006, RNA815_10011.2}
8.	MligTC455_08731	25	0.51	Mlig455_027598, Mlig455_046198	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.932	INSR	0.967	-	-	-	-	0.967	-	Mlig455_027598 {REF} {Length: 3873} {Pfam: Receptor L domain [PF01030.26, score=101.4]; Furin-like cysteine rich region [PF00757.22, score=74.7]; Fibronectin type III domain [PF00041.23, score=43.9]} {Human: ENSG00000171105, INSR, insulin receptor, [Score=273, Expect=2e-74]} {Mouse: ENSMUSG00000005534, Insr, insulin receptor, [Score=274, Expect=4e-75]} {Dmel: FBgn0038279, Sdr, Secreted decoy of InR, [RH, Score=179, Expect=1e-45]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [Score=162, Expect=7e-40]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [Score=232, Expect=6e-62]} {RNA1310_49718} {RNA815_58354} Mlig455_046198 {REF} {Length: 5376} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=207.9]; Protein kinase domain [PF00069.27, score=113.3]; Receptor L domain [PF01030.26, score=100.7]; Furin-like cysteine rich region [PF00757.22, score=74.3]; Fibronectin type III domain [PF00041.23, score=41.2]} {Human: ENSG00000171105, INSR, insulin receptor, [Score=435, Expect=9e-129]} {Mouse: ENSMUSG00000005534, Insr, insulin receptor, [Score=437, Expect=6e-130]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [Score=189, Expect=9e-48]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [Score=169, Expect=5e-42]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [Score=378, Expect=3e-109]} {RNA1310_49718} {RNA815_58354}
9.	MligTC455_12720	17	0.36	Mlig455_023405	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_023405 {REF} {Length: 1217} {RNA1310_90924}
10.	MligTC455_18602	116	2.42	Mlig455_003494	Neo: - Age: -	KCTD21	0.965	-	-	-	-	0.965	-	Mlig455_003494 {REF} {Length: 3275} {Pfam: BTB/POZ domain [PF02214.24, score=65.0]} {Human: ENSG00000188997, KCTD21, potassium channel tetramerization domain containing 21, [Score=88.6, Expect=3e-21]; ENSG00000183783, KCTD8, potassium channel tetramerization domain containing 8, [Score=87.8, Expect=7e-19]} {Mouse: ENSMUSG00000044952, Kctd21, potassium channel tetramerisation domain containing 21, [Score=87.8, Expect=5e-20]; ENSMUSG00000037653, Kctd8, potassium channel tetramerisation domain containing 8, [Score=85.9, Expect=2e-18]} {Dmel: FBgn0038839, Ktl, Kctd12-like, [Score=82.0, Expect=3e-18]} {Celegans: WBGene00014848, VM106R.1, [Score=77.4, Expect=4e-16]} {Smed: dd_Smed_v6_8654_0_1, dd_Smed_v6_8654_0_1, [Score=89.0, Expect=8e-21]} {RNA1310_21779.1} {RNA815_18356}
11.	MligTC455_22272	6	0.13	Mlig455_050013	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_050013 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1509_12830} {RNA1310_79708} {RNA815_9685.1}
12.	MligTC455_18452	224	4.66	Mlig455_057585	Neo: - Age: -	SLC25A19	0.962	-	-	-	-	0.962	-	Mlig455_057585 {REF} {Length: 2123} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=175.6]; Keratin, high sulfur B2 protein [PF13885.8, score=25.5]} {Human: ENSG00000125454, SLC25A19, solute carrier family 25 member 19, [RH, Score=217, Expect=8e-66]} {Mouse: ENSMUSG00000020744, Slc25a19, solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19, [RH, Score=209, Expect=5e-63]} {Dmel: FBgn0037852, Tpc1, Thiamine pyrophosphate carrier protein 1, [Score=157, Expect=1e-43]} {Celegans: WBGene00016588, hpo-12, [RH, Score=179, Expect=4e-52]} {Smed: dd_Smed_v6_8180_0_1, dd_Smed_v6_8180_0_1, [RH, Score=208, Expect=4e-63]} {RNA1509_10133} {RNA1310_17797} {RNA815_5564}
13.	MligTC455_34459	63	1.32	Mlig455_056794	Neo: - Age: - Region-enriched R5: 4.372/0.02539		0.962	-	-	-	-	0.962	-	Mlig455_056794 {REF} {Length: 2361} {NoTransDecoderORF} {RNA1509_44936} {RNA1310_1458.1, RNA1509_44936} {RNA1509_44936, RNA815_5252.1}
14.	MligTC455_34488	72	1.5	Mlig455_051688	Neo: - Age: -	DAG1	0.962	-	-	-	-	0.962	-	Mlig455_051688 {REF} {Length: 4571} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=47.3]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=31.6]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=61.2, Expect=1e-08]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=2e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=82.8, Expect=8e-16]} {RNA1509_57075} {RNA1310_1596.1, RNA1509_57075} {RNA1509_57075, RNA815_7113}
15.	MligTC455_45774	17	0.35	Mlig455_063164	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_063164 {REF} {Length: 623} {NoTransDecoderORF} {RNA1509_27637} {RNA1310_5757} {RNA815_34558}
16.	MligTC455_43700	28	0.58	Mlig455_047711	Neo: - Age: - Regeneration-upregulated R2: 3.521 Regeneration-enriched R2: 3.521	LZTS3	0.96	-	-	-	-	0.960	-	Mlig455_047711 {REF} {Length: 3139} {Pfam: Fez1 [PF06818.17, score=51.8]} {Human: ENSG00000088899, LZTS3, leucine zipper tumor suppressor family member 3, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_9487_0_1, dd_Smed_v6_9487_0_1, [RH, Score=65.1, Expect=5e-11]} {RNA1509_57436} {RNA1310_22131} {RNA815_51549}
17.	MligTC455_10786	15	0.32	Mlig455_018164	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_018164 {REF} {Length: 1819} {Pfam: F5/8 type C domain [PF00754.27, score=24.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [RH, Score=57.8, Expect=5e-10]} {RNA1310_114361}
18.	MligTC455_55680	10	0.21	Mlig455_008508	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_008508 {REF} {Length: 462} {NoTransDecoderORF}
19.	MligTC455_56068	7	0.15	Mlig455_050265	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_050265 {REF} {Length: 408} {NoTransDecoderORF} {RNA1509_8112} {RNA1310_65693} {RNA815_1829.1}
20.	MligTC455_13354	12	0.26	Mlig455_019393	Neo: - Age: -	GRIK4	0.958	-	-	-	-	0.958	-	Mlig455_019393 {REF} {Length: 2465} {Pfam: Ligand-gated ion channel [PF00060.28, score=92.8]} {Human: ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=101, Expect=4e-23]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=99.4, Expect=1e-22]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=95.1, Expect=3e-21]} {Dmel: FBgn0038837, CG3822, [Score=103, Expect=3e-24]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_31078_0_1, dd_Smed_v6_31078_0_1, [Score=209, Expect=4e-65]} {RNA1509_10728} {RNA1310_13608.1} {RNA815_15283}
21.	MligTC455_38479	142	2.97	Mlig455_049645, Mlig455_054626	Neo: - Age: Up-Down-Down	CDK19, CDK8	0.958	-	-	-	-	0.958	-	Mlig455_049645 {REF} {Length: 3873} {Pfam: Protein kinase domain [PF00069.27, score=76.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=29.9]} {Human: ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=284, Expect=1e-90]; ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=280, Expect=7e-89]} {Mouse: ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=289, Expect=1e-92]; ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=279, Expect=2e-88]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=273, Expect=4e-87]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=235, Expect=4e-71]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=271, Expect=3e-86]} {RNA1509_51791} {RNA1310_26782.1} {RNA815_30571} Mlig455_054626 {REF} {Length: 4315} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=191.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=89.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.7]} {Human: ENSG00000155111, CDK19, cyclin dependent kinase 19, [Score=473, Expect=2e-162]; ENSG00000132964, CDK8, cyclin dependent kinase 8, [Score=470, Expect=7e-162]} {Mouse: ENSMUSG00000029635, Cdk8, cyclin-dependent kinase 8, [Score=471, Expect=2e-162]; ENSMUSG00000038481, Cdk19, cyclin-dependent kinase 19, [Score=471, Expect=4e-162]} {Dmel: FBgn0015618, Cdk8, Cyclin-dependent kinase 8, [Score=462, Expect=4e-159]} {Celegans: WBGene00000409, cdk-8, Cyclin-dependent kinase 8, [Score=417, Expect=9e-140]} {Smed: dd_Smed_v6_6004_0_2, dd_Smed_v6_6004_0_2, [Score=449, Expect=3e-154]} {RNA1509_29840} {RNA1310_20139, RNA1509_29840} {RNA1509_29840, RNA815_12999}
22.	MligTC455_50304	17	0.35	Mlig455_067422	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_067422 {REF} {Length: 751} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_82384} {RNA815_44872}
23.	MligTC455_30755	8	0.16	Mlig455_014677	Neo: - Age: Down-Up-Down	APBA2	0.953	-	-	-	-	0.953	-	Mlig455_014677 {REF} {Length: 2306} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=31.5]} {Human: ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [Score=66.2, Expect=1e-10]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [Score=66.2, Expect=1e-10]; ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [Score=62.8, Expect=9e-10]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [Score=62.4, Expect=1e-09]} {Dmel: FBgn0026313, X11L, [Score=75.1, Expect=1e-13]} {Celegans: WBGene00002999, lin-10, [Score=70.5, Expect=2e-12]} {Smed: dd_Smed_v6_2836_0_1, dd_Smed_v6_2836_0_1, [Score=129, Expect=1e-31]} {RNA1509_6664} {RNA1310_14590} {RNA815_2382}
24.	MligTC455_47373	30	0.63	Mlig455_050214, Mlig455_050224	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_050214 {REF} {Length: 754} {RNA1310_130371} Mlig455_050224 {REF} {Length: 769} {RNA1310_130371}
25.	MligTC455_48019	15	0.32	Mlig455_031400	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_031400 {REF} {Length: 893} {NoTransDecoderORF} {RNA1310_54309}
26.	MligTC455_10895	168	3.49	Mlig455_026819	Neo: - Age: Down-Down-Down Region-enriched R3: 2.926/0.02755 Region-enriched R4: 2.348/0.02223		0.952	-	-	-	-	0.952	-	Mlig455_026819 {REF} {Length: 789} {NoTransDecoderORF} {RNA1310_51062} {RNA815_26657}
27.	MligTC455_32969	4	0.09	Mlig455_031795	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_031795 {REF} {Length: 1884}
28.	MligTC455_30687	63	1.32	Mlig455_051422	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_051422 {REF} {Length: 3419} {RNA1509_47978} {RNA1310_70803} {RNA815_36635}