Data search
Results for MligTC455_12775
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12775 | 11 | 0.23 | Mlig455_004805 | Neo: - Age: - |
Mlig455_004805 {REF} {Length: 996} {NoTransDecoderORF} {RNA1310_49194} |
Cumulative graph for MligTC455_12775
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_12775
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12775 | 11 | 0.23 | Mlig455_004805 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_004805 {REF} {Length: 996} {NoTransDecoderORF} {RNA1310_49194} | |
| 2. | MligTC455_35373 | 50 | 1.03 | Mlig455_065912, Mlig455_070019 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 7.651 Regeneration-enriched BL: 7.651 |
GLRA2 | 0.986 | - | - | - | - | 0.986 | - | Mlig455_065912 {REF} {Length: 3290} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=121.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=327, Expect=1e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=321, Expect=2e-104]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=319, Expect=1e-103]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=325, Expect=4e-106]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=323, Expect=3e-105]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=3e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=2e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=5e-93]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=283, Expect=3e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} Mlig455_070019 {REF} {Length: 4890} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=326, Expect=2e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=323, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=318, Expect=2e-103]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=325, Expect=5e-106]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=324, Expect=7e-106]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=6e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=1e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=7e-92]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=284, Expect=2e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} |
| 3. | MligTC455_41048 | 764 | 15.92 | Mlig455_045087 | Neo: - Age: logFC(26M/2M)=-0.302 |
TBX2 | 0.986 | - | - | - | - | 0.986 | - | Mlig455_045087 {REF} {Length: 2264} {Pfam: T-box [PF00907.24, score=261.7]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=321, Expect=3e-101]; ENSG00000135111, TBX3, T-box 3, [Score=317, Expect=3e-99]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [Score=325, Expect=7e-103]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=320, Expect=6e-101]} {Dmel: FBgn0000179, bi, bifid, [Score=320, Expect=8e-99]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=288, Expect=2e-92]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=322, Expect=8e-103]} {RNA1509_19743, RNA1509_48603} {RNA1310_24036, RNA1509_19743, RNA1509_48603} {RNA1509_19743, RNA1509_48603, RNA815_18470} |
| 4. | MligTC455_41773 | 342 | 7.12 | Mlig455_033729 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R4: 2.782/0.01934 Regeneration-upregulated BL: 2.334 Regeneration-enriched BL: 2.334 |
RAB10 | 0.979 | - | - | - | - | 0.979 | - | Mlig455_033729 {REF} {Length: 1706} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=216.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=63.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; RsgA GTPase [PF03193.18, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=18.9]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [Score=259, Expect=2e-88]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [Score=259, Expect=1e-88]} {Dmel: FBgn0015789, Rab10, [Score=246, Expect=2e-83]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [Score=244, Expect=1e-82]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=224, Expect=1e-74]} {RNA1509_59464} {RNA1310_45042} {RNA815_22097} |
| 5. | MligTC455_27881 | 54 | 1.12 | Mlig455_062466 | Neo: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} | |
| 6. | MligTC455_14964 | 22 | 0.46 | Mlig455_029327 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_029327 {REF} {Length: 2017} {NoTransDecoderORF} {RNA1509_14659, RNA1509_45055} {RNA1310_2938.1, RNA1509_45055} {RNA1509_45055, RNA815_14343.1} | |
| 7. | MligTC455_24052 | 272 | 5.66 | Mlig455_065284, Mlig455_065290 | Neo: - Age: Down-Up-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_065284 {REF} {Length: 1698} {RNA1509_34738} {RNA1310_59354} {RNA815_53074} Mlig455_065290 {REF} {Length: 3344} {TRANSSPLICED} {Pfam: EamA-like transporter family [PF00892.22, score=24.1]} {RNA1509_34738} {RNA1310_59354} {RNA815_26334} |
|
| 8. | MligTC455_35051 | 220 | 4.58 | Mlig455_020175 | Neo: - Age: Down-Up-Down Region-enriched R8: 5.304/0.00000 |
CALM3 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_020175 {REF} {Length: 927} {Pfam: EF hand [PF00036.34, score=111.3]; EF-hand domain pair [PF13499.8, score=98.6]; EF-hand domain [PF13405.8, score=91.1]; EF-hand domain pair [PF13833.8, score=78.1]; EF hand [PF13202.8, score=76.7]; EF-hand domain [PF14658.8, score=56.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.7]; Dockerin type I domain [PF00404.20, score=22.0]; EF-hand domain [PF17959.3, score=21.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=146, Expect=5e-45]; ENSG00000198668, CALM1, calmodulin 1, [Score=146, Expect=5e-45]; ENSG00000143933, CALM2, calmodulin 2, [Score=146, Expect=5e-45]; ENSG00000178363, CALML3, calmodulin like 3, [Score=143, Expect=8e-44]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=146, Expect=3e-45]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=146, Expect=3e-45]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=146, Expect=3e-45]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=144, Expect=4e-44]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=148, Expect=8e-46]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=7e-46]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=147, Expect=5e-46]} {RNA1310_46966} {RNA815_26674} |
| 9. | MligTC455_07174 | 94 | 1.96 | Mlig455_007312 | Neo: - Age: Up-Down-Down |
0.955 | - | - | - | - | 0.955 | - | Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807} | |
| 10. | MligTC455_51970 | 10 | 0.21 | Mlig455_058942 | Neo: - Age: Up-Down-Down |
0.955 | - | - | - | - | 0.955 | - | Mlig455_058942 {REF} {Length: 2794} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_33135} {RNA815_39433} | |
| 11. | MligTC455_39606 | 760 | 15.83 | Mlig455_041071, Mlig455_041073, Mlig455_064712 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.586 Region-enriched R7: 2.475/0.00685 |
AL035078.4, CALU, RCN1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_041071 {REF} {Length: 756} {Human: ENSG00000285283, AL035078.4, novel protein, [Score=45.8, Expect=1e-05]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=46.6, Expect=5e-06]} {Celegans: WBGene00015646, mlt-10, [Score=66.2, Expect=7e-13]} {RNA1509_42339} {RNA1310_2126} {RNA815_1130} Mlig455_041073 {REF} {Length: 854} {Pfam: EF-hand domain pair [PF13499.8, score=20.9]; EF-hand domain [PF13405.8, score=18.8]; EF hand [PF00036.34, score=18.3]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=56.2, Expect=1e-09]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=52.4, Expect=1e-08]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=57.0, Expect=3e-10]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=53.1, Expect=5e-09]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=49.7, Expect=5e-08]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} Mlig455_064712 {REF} {Length: 2449} {Pfam: EF hand [PF00036.34, score=58.7]; EF-hand domain pair [PF13499.8, score=58.2]; EF-hand domain [PF13405.8, score=50.6]; EF hand [PF13202.8, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=20.8]; EF-hand domain pair [PF13833.8, score=19.4]} {Human: ENSG00000128595, CALU, calumenin, [Score=85.9, Expect=1e-17]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=84.7, Expect=1e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=84.7, Expect=1e-17]} {Celegans: WBGene00015646, mlt-10, [Score=177, Expect=1e-47]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=109, Expect=3e-26]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} |