Data search
Results for MligTC455_41773
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41773 | 342 | 7.12 | Mlig455_033729 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R4: 2.782/0.01934 Regeneration-upregulated BL: 2.334 Regeneration-enriched BL: 2.334 |
RAB10 | Mlig455_033729 {REF} {Length: 1706} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=216.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=63.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; RsgA GTPase [PF03193.18, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=18.9]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [Score=259, Expect=2e-88]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [Score=259, Expect=1e-88]} {Dmel: FBgn0015789, Rab10, [Score=246, Expect=2e-83]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [Score=244, Expect=1e-82]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=224, Expect=1e-74]} {RNA1509_59464} {RNA1310_45042} {RNA815_22097} |
Cumulative graph for MligTC455_41773
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.446 | 3.273 | 0.37318 | 1.00000 | |
| RegionR2 | 0.389 | 3.273 | 0.67538 | 1.00000 | |
| RegionR3 | 1.11 | 3.273 | 0.16535 | 0.68708 | |
| RegionR4 | 2.782 | 3.273 | 0.00222 | 0.01934 | |
| RegionR5 | 0.892 | 3.273 | 0.29445 | 0.62759 | |
| RegionR6 | 0.528 | 3.273 | 0.56657 | 1.00000 | |
| RegionR7 | -1.618 | 3.273 | 0.99730 | 1.00000 | |
| RegionR8 | 0.363 | 3.273 | 0.71465 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.476 | 3.273 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.004 | 3.273 | 0.99372 | 1.00000 | |
| RegenerationR3 | -0.873 | 3.273 | 0.11870 | 0.53655 | |
| RegenerationR4 | -0.602 | 3.273 | 0.34526 | 0.77630 | |
| RegenerationR5 | -0.403 | 3.273 | 0.46879 | 0.84132 | |
| RegenerationR6 | -1.057 | 3.273 | 0.10666 | 0.40446 | |
| RegenerationBL | 2.334 | 3.273 | 0.00026 | 0.00900 | Specific for BL: 2.334 |
| RegenerationTP | 0.843 | 3.273 | 0.32659 | 0.77134 |
Genes with expression patterns similar to MligTC455_41773
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41773 | 342 | 7.12 | Mlig455_033729 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R4: 2.782/0.01934 Regeneration-upregulated BL: 2.334 Regeneration-enriched BL: 2.334 |
RAB10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033729 {REF} {Length: 1706} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=216.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=63.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; RsgA GTPase [PF03193.18, score=23.0]; 50S ribosome-binding GTPase [PF01926.25, score=18.9]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [Score=259, Expect=2e-88]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [Score=259, Expect=1e-88]} {Dmel: FBgn0015789, Rab10, [Score=246, Expect=2e-83]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [Score=244, Expect=1e-82]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=224, Expect=1e-74]} {RNA1509_59464} {RNA1310_45042} {RNA815_22097} |
| 2. | MligTC455_04939 | 395 | 8.23 | Mlig455_004466 | Neo: - Age: Down-Up-Down |
CDKL1 | 2.654 | - | 0.877 | - | - | 0.959 | 0.818 | Mlig455_004466 {REF} {Length: 4238} {Pfam: Protein kinase domain [PF00069.27, score=246.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.7]; ABC1 atypical kinase-like domain [PF03109.18, score=19.0]; RIO1 family [PF01163.24, score=18.4]; Haspin like kinase domain [PF12330.10, score=17.8]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=423, Expect=2e-147]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=416, Expect=3e-144]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=423, Expect=7e-148]} {Dmel: FBgn0031730, CG7236, [RH, Score=379, Expect=3e-129]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=375, Expect=2e-128]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=471, Expect=1e-166]} {RNA1509_9935} {RNA1310_3805.1} {RNA815_2206} |
| 3. | MligTC455_41048 | 764 | 15.92 | Mlig455_045087 | Neo: - Age: logFC(26M/2M)=-0.302 |
TBX2 | 2.413 | - | - | - | 0.707 | 0.961 | 0.745 | Mlig455_045087 {REF} {Length: 2264} {Pfam: T-box [PF00907.24, score=261.7]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=321, Expect=3e-101]; ENSG00000135111, TBX3, T-box 3, [Score=317, Expect=3e-99]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [Score=325, Expect=7e-103]; ENSMUSG00000000093, Tbx2, T-box 2, [Score=320, Expect=6e-101]} {Dmel: FBgn0000179, bi, bifid, [Score=320, Expect=8e-99]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=288, Expect=2e-92]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=322, Expect=8e-103]} {RNA1509_19743, RNA1509_48603} {RNA1310_24036, RNA1509_19743, RNA1509_48603} {RNA1509_19743, RNA1509_48603, RNA815_18470} |
| 4. | MligTC455_53909 | 765 | 15.95 | Mlig455_034369 | Neo: - Age: - Regeneration-upregulated BL: 3.468 Regeneration-enriched BL: 3.468 |
SBSN | 1.694 | - | - | - | 0.737 | 0.957 | - | Mlig455_034369 {REF} {Length: 2517} {Pfam: Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000189001, SBSN, suprabasin, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00001113, dur-1, Dauer Up-Regulated, [Score=120, Expect=3e-28]} {RNA1509_53891} {RNA1310_42336} {RNA815_24531} |
| 5. | MligTC455_33607 | 482 | 10.03 | Mlig455_064683 | Neo: Int S/G2/M Age: - |
KDM1A | 1.675 | - | - | - | 0.703 | 0.972 | - | Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019} |
| 6. | MligTC455_12775 | 11 | 0.23 | Mlig455_004805 | Neo: - Age: - |
0.979 | - | - | - | - | 0.979 | - | Mlig455_004805 {REF} {Length: 996} {NoTransDecoderORF} {RNA1310_49194} | |
| 7. | MligTC455_41957 | 50 | 1.04 | Mlig455_045094 | Neo: - Age: - |
0.966 | - | - | - | - | 0.966 | - | Mlig455_045094 {REF} {Length: 716} {NoTransDecoderORF} {RNA1310_81641} | |
| 8. | MligTC455_14964 | 22 | 0.46 | Mlig455_029327 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_029327 {REF} {Length: 2017} {NoTransDecoderORF} {RNA1509_14659, RNA1509_45055} {RNA1310_2938.1, RNA1509_45055} {RNA1509_45055, RNA815_14343.1} | |
| 9. | MligTC455_35373 | 50 | 1.03 | Mlig455_065912, Mlig455_070019 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 7.651 Regeneration-enriched BL: 7.651 |
GLRA2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_065912 {REF} {Length: 3290} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=121.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=327, Expect=1e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=321, Expect=2e-104]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=319, Expect=1e-103]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=325, Expect=4e-106]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=323, Expect=3e-105]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=3e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=2e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=5e-93]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=283, Expect=3e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} Mlig455_070019 {REF} {Length: 4890} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=326, Expect=2e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=323, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=318, Expect=2e-103]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=325, Expect=5e-106]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=324, Expect=7e-106]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=6e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=1e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=7e-92]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=284, Expect=2e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491} |
| 10. | MligTC455_27881 | 54 | 1.12 | Mlig455_062466 | Neo: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} | |
| 11. | MligTC455_37698 | 9576 | 199.51 | Mlig455_012338 | Neo: - Age: - Regeneration-upregulated BL: 2.741 Regeneration-enriched BL: 2.741 |
HMCN2 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_012338 {REF} {Length: 7183} {Pfam: von Willebrand factor type A domain [PF13519.8, score=235.7]; von Willebrand factor type A domain [PF13768.8, score=127.1]; Protein of unknown function (DUF1638) [PF07796.13, score=56.4]; VWA domain containing CoxE-like protein [PF05762.16, score=54.0]; NTPase [PF03266.17, score=32.1]; Colicin Ia [PF11504.10, score=29.0]; Tetrahydromethanopterin S-methyltransferase, subunit A [PF04208.16, score=27.9]; Family of unknown function (DUF5347) [PF17282.4, score=25.0]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=73.6, Expect=3e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=72.0, Expect=1e-11]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=73.2, Expect=3e-12]; ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=72.4, Expect=7e-12]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=93.2, Expect=1e-18]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=92.4, Expect=2e-18]} {RNA1509_415} {RNA1310_3126.1} {RNA815_1151.1} |
| 12. | MligTC455_37699 | 9492 | 197.74 | Mlig455_034962 | Neo: - Age: - Regeneration-upregulated BL: 2.634 Regeneration-enriched BL: 2.634 |
HMCN2 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_034962 {REF} {Length: 5538} {Pfam: von Willebrand factor type A domain [PF13519.8, score=200.3]; von Willebrand factor type A domain [PF13768.8, score=108.6]; Protein of unknown function (DUF1638) [PF07796.13, score=47.0]; VWA domain containing CoxE-like protein [PF05762.16, score=46.2]; NTPase [PF03266.17, score=26.8]; Colicin Ia [PF11504.10, score=25.5]; Family of unknown function (DUF5347) [PF17282.4, score=20.6]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=73.2, Expect=4e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=71.6, Expect=1e-11]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=73.6, Expect=2e-12]; ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=72.0, Expect=7e-12]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=93.2, Expect=1e-18]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=92.8, Expect=1e-18]} {RNA1509_415, RNA1509_59657} {RNA1310_3126.1, RNA1509_59657} {RNA1509_59657, RNA815_1151.1} |
| 13. | MligTC455_39921 | 16 | 0.34 | Mlig455_011423 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_011423 {REF} {Length: 868} {NoTransDecoderORF} {RNA1509_46569} {RNA1310_25987} {RNA815_7475.2} | |
| 14. | MligTC455_07174 | 94 | 1.96 | Mlig455_007312 | Neo: - Age: Up-Down-Down |
0.958 | - | - | - | - | 0.958 | - | Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807} | |
| 15. | MligTC455_35051 | 220 | 4.58 | Mlig455_020175 | Neo: - Age: Down-Up-Down Region-enriched R8: 5.304/0.00000 |
CALM3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_020175 {REF} {Length: 927} {Pfam: EF hand [PF00036.34, score=111.3]; EF-hand domain pair [PF13499.8, score=98.6]; EF-hand domain [PF13405.8, score=91.1]; EF-hand domain pair [PF13833.8, score=78.1]; EF hand [PF13202.8, score=76.7]; EF-hand domain [PF14658.8, score=56.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=26.7]; Dockerin type I domain [PF00404.20, score=22.0]; EF-hand domain [PF17959.3, score=21.1]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=146, Expect=5e-45]; ENSG00000198668, CALM1, calmodulin 1, [Score=146, Expect=5e-45]; ENSG00000143933, CALM2, calmodulin 2, [Score=146, Expect=5e-45]; ENSG00000178363, CALML3, calmodulin like 3, [Score=143, Expect=8e-44]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=146, Expect=3e-45]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=146, Expect=3e-45]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=146, Expect=3e-45]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=144, Expect=4e-44]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=148, Expect=8e-46]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=147, Expect=7e-46]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=147, Expect=5e-46]} {RNA1310_46966} {RNA815_26674} |
| 16. | MligTC455_32973 | 42 | 0.88 | Mlig455_048857 | Neo: - Age: - |
KCTD1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_048857 {REF} {Length: 2446} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=41.7]; Phage integrase family [PF00589.24, score=30.2]} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=98.2, Expect=3e-21]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=98.2, Expect=2e-21]} {RNA1509_32880} {RNA1310_39104} {RNA815_16657.2} |
| 17. | MligTC455_19844 | 270 | 5.62 | Mlig455_068340 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_068340 {REF} {Length: 348} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_28703} {RNA1310_21339} {RNA815_12138.1} | |
| 18. | MligTC455_45522 | 524 | 10.92 | Mlig455_024216 | Neo: - Age: - |
SH3GLB1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_024216 {REF} {Length: 2196} {Pfam: BAR domain [PF03114.20, score=213.0]; BAR domain of APPL family [PF16746.7, score=30.8]; Bin/amphiphysin/Rvs domain for vesicular trafficking [PF10455.11, score=29.7]} {Human: ENSG00000097033, SH3GLB1, SH3 domain containing GRB2 like, endophilin B1, [RH, Score=264, Expect=4e-87]} {Mouse: ENSMUSG00000037062, Sh3glb1, SH3-domain GRB2-like B1 (endophilin), [RH, Score=265, Expect=7e-88]} {Dmel: FBgn0034433, EndoB, Endophilin B, [RH, Score=231, Expect=2e-74]} {Celegans: WBGene00001335, F35A5.8, Endophilin-Related Protein, [RH, Score=227, Expect=3e-73]} {Smed: dd_Smed_v6_1387_0_2, dd_Smed_v6_1387_0_2, [RH, Score=199, Expect=6e-64]} {RNA1509_34163, RNA1509_37386, RNA1509_43220, RNA1509_55485} {RNA1310_19399, RNA1509_34163, RNA1509_37386, RNA1509_43220, RNA1509_55485} {RNA1509_34163, RNA1509_37386, RNA1509_43220, RNA1509_55485, RNA815_8016.2} |
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