TomoSeq data search

Data search

Results for MligTC455_12798

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_12798	27	0.56	Mlig455_052828	Neo: - Age: -	PCDHGA10	Mlig455_052828 {REF} {Length: 4445} {Pfam: Cadherin domain [PF00028.19, score=200.9]; Cadherin-like [PF16184.7, score=30.0]; Cadherin-like [PF08266.14, score=24.1]} {Human: ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=180, Expect=1e-45]; ENSG00000253767, PCDHGA8, protocadherin gamma subfamily A, 8, [Score=177, Expect=1e-44]; ENSG00000261934, PCDHGA9, protocadherin gamma subfamily A, 9, [Score=174, Expect=8e-44]; ENSG00000253731, PCDHGA6, protocadherin gamma subfamily A, 6, [Score=173, Expect=1e-43]; ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=172, Expect=4e-43]; ENSG00000165194, PCDH19, protocadherin 19, [Score=172, Expect=6e-43]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=181, Expect=8e-46]; ENSMUSG00000102222, Pcdhga10, protocadherin gamma subfamily A, 10, [Score=177, Expect=7e-45]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=172, Expect=1e-42]} {Dmel: FBgn0024836, stan, starry night, [Score=187, Expect=1e-47]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=173, Expect=2e-43]} {Smed: dd_Smed_v6_14523_0_1, dd_Smed_v6_14523_0_1, [RH, Score=229, Expect=1e-61]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_12798

0.56

Mlig455_052828

Neo: -

Age: -

PCDHGA10

Mlig455_052828 {REF} {Length: 4445} {Pfam: Cadherin domain [PF00028.19, score=200.9]; Cadherin-like [PF16184.7, score=30.0]; Cadherin-like [PF08266.14, score=24.1]} {Human: ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=180, Expect=1e-45]; ENSG00000253767, PCDHGA8, protocadherin gamma subfamily A, 8, [Score=177, Expect=1e-44]; ENSG00000261934, PCDHGA9, protocadherin gamma subfamily A, 9, [Score=174, Expect=8e-44]; ENSG00000253731, PCDHGA6, protocadherin gamma subfamily A, 6, [Score=173, Expect=1e-43]; ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=172, Expect=4e-43]; ENSG00000165194, PCDH19, protocadherin 19, [Score=172, Expect=6e-43]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=181, Expect=8e-46]; ENSMUSG00000102222, Pcdhga10, protocadherin gamma subfamily A, 10, [Score=177, Expect=7e-45]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=172, Expect=1e-42]} {Dmel: FBgn0024836, stan, starry night, [Score=187, Expect=1e-47]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=173, Expect=2e-43]} {Smed: dd_Smed_v6_14523_0_1, dd_Smed_v6_14523_0_1, [RH, Score=229, Expect=1e-61]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}

Cumulative graph for MligTC455_12798

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.116	0.879	0.99983	1.00000
RegionR2	0.358	0.879	0.75300	1.00000
RegionR3	0.41	0.879	0.59234	1.00000
RegionR4	3.067	0.879	0.23247	0.52631
RegionR5	2.943	0.879	0.07727	0.25552
RegionR6	-2.051	0.879	0.99982	1.00000
RegionR7	-2.302	0.879	1.00000	1.00000
RegionR8	-2.542	0.879	0.99990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.003	0.879	0.99997	1.00000
RegenerationR2	0.94	0.879	0.75957	0.97644
RegenerationR3	0.753	0.879	0.94458	1.00000
RegenerationR4	-1.163	0.879	0.55430	0.89395
RegenerationR5	-0.585	0.879	0.57096	0.89625
RegenerationR6	0.347	0.879	1.00000	1.00000
RegenerationBL	0.711	0.879	0.99986	1.00000
RegenerationTP	2.795	0.879	0.44922	0.86657

Genes with expression patterns similar to MligTC455_12798

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_12798	27	0.56	Mlig455_052828	Neo: - Age: -	PCDHGA10	1	-	-	-	-	-	1.000	Mlig455_052828 {REF} {Length: 4445} {Pfam: Cadherin domain [PF00028.19, score=200.9]; Cadherin-like [PF16184.7, score=30.0]; Cadherin-like [PF08266.14, score=24.1]} {Human: ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=180, Expect=1e-45]; ENSG00000253767, PCDHGA8, protocadherin gamma subfamily A, 8, [Score=177, Expect=1e-44]; ENSG00000261934, PCDHGA9, protocadherin gamma subfamily A, 9, [Score=174, Expect=8e-44]; ENSG00000253731, PCDHGA6, protocadherin gamma subfamily A, 6, [Score=173, Expect=1e-43]; ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=172, Expect=4e-43]; ENSG00000165194, PCDH19, protocadherin 19, [Score=172, Expect=6e-43]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=181, Expect=8e-46]; ENSMUSG00000102222, Pcdhga10, protocadherin gamma subfamily A, 10, [Score=177, Expect=7e-45]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=172, Expect=1e-42]} {Dmel: FBgn0024836, stan, starry night, [Score=187, Expect=1e-47]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=173, Expect=2e-43]} {Smed: dd_Smed_v6_14523_0_1, dd_Smed_v6_14523_0_1, [RH, Score=229, Expect=1e-61]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}
2.	MligTC455_27483	115	2.4	Mlig455_038002, Mlig455_060692	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_038002 {REF} {Length: 1700} {Pfam: Crescentin protein [PF19220.2, score=18.4]} {RNA1509_49894} {RNA1310_436.1} {RNA815_16288} Mlig455_060692 {REF} {Length: 1705} {Pfam: Crescentin protein [PF19220.2, score=18.0]} {RNA1509_49894} {RNA1310_436.1} {RNA815_16288}
3.	MligTC455_54073	45	0.94	Mlig455_066394	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_066394 {REF} {Length: 2791} {TRANSSPLICED} {RNA1509_38785} {RNA1310_10561} {RNA815_4266}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts