TomoSeq data search

Data search

Results for MligTC455_54073

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_54073	45	0.94	Mlig455_066394	Neo: - Age: -		Mlig455_066394 {REF} {Length: 2791} {TRANSSPLICED} {RNA1509_38785} {RNA1310_10561} {RNA815_4266}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_54073

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.865	1.209	0.99965	1.00000
RegionR2	3.169	1.209	0.03944	0.23072
RegionR3	1.569	1.209	0.19144	0.72861
RegionR4	-0.682	1.209	0.90278	1.00000
RegionR5	0.802	1.209	0.44555	0.80693
RegionR6	0.393	1.209	0.64241	1.00000
RegionR7	-2.919	1.209	1.00000	1.00000
RegionR8	3.532	1.209	0.02501	0.30850

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.18	1.209	0.99982	1.00000
RegenerationR2	0.205	1.209	0.82590	0.99615
RegenerationR3	0.78	1.209	0.46090	0.83819
RegenerationR4	0.261	1.209	0.81001	0.98954
RegenerationR5	0.829	1.209	0.35505	0.76767
RegenerationR6	1.607	1.209	0.23747	0.58505
RegenerationBL	-1.816	1.209	0.99984	1.00000
RegenerationTP	1.457	1.209	0.45442	0.87079

Genes with expression patterns similar to MligTC455_54073

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54073	45	0.94	Mlig455_066394	Neo: - Age: -		4	-	1.000	1.000	-	1.000	1.000	Mlig455_066394 {REF} {Length: 2791} {TRANSSPLICED} {RNA1509_38785} {RNA1310_10561} {RNA815_4266}
2.	MligTC455_51105	435	9.07	Mlig455_061484	Neo: - Age: logFC(26M/2M)=-0.364 Region-enriched R2: 2.295/0.00725	PDE2A	1.808	-	-	0.968	-	0.840	-	Mlig455_061484 {REF} {Length: 4650} {TRANSSPLICED} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=241.7]; GAF domain [PF01590.28, score=64.5]; GAF domain [PF13185.8, score=57.9]; GAF domain [PF13492.8, score=21.4]} {Human: ENSG00000186642, PDE2A, phosphodiesterase 2A, [RH, Score=744, Expect=0.0]} {Mouse: ENSMUSG00000030653, Gm45837, predicted gene 45837, [RH, Score=723, Expect=0.0]; ENSMUSG00000110195, Pde2a, phosphodiesterase 2A, cGMP-stimulated, [RH, Score=722, Expect=0.0]} {Dmel: FBgn0038237, Pde6, Phosphodiesterase 6, [Score=352, Expect=7e-105]} {Celegans: WBGene00011146, pde-2, Probable 3',5'-cyclic phosphodiesterase pde-2, [RH, Score=348, Expect=5e-106]} {Smed: dd_Smed_v6_8589_0_1, dd_Smed_v6_8589_0_1, [RH, Score=816, Expect=0.0]} {RNA1509_5437} {RNA1310_13971.2} {RNA815_851.1}
3.	MligTC455_46240	389	8.09	Mlig455_050907, Mlig455_067807	Neo: Int S/G2/M Age: -		1.69	-	-	0.972	-	0.718	-	Mlig455_050907 {REF} {Length: 4183} {TRANSSPLICED} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.4]} {RNA1509_12750, RNA1509_39446} {RNA1310_4308, RNA1509_12750, RNA1509_39446} {RNA1509_12750, RNA1509_39446, RNA815_2028} Mlig455_067807 {REF} {Length: 4183} {TRANSSPLICED} {Pfam: Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.4]} {RNA1509_12750, RNA1509_35652, RNA1509_59964} {RNA1310_4308, RNA1509_35652, RNA1509_59964} {RNA1509_35652, RNA1509_59964, RNA815_2028}
4.	MligTC455_41131	40	0.84	Mlig455_042108	Neo: - Age: -		0.995	-	-	0.995	-	-	-	Mlig455_042108 {REF} {Length: 1899} {Pfam: F5/8 type C domain [PF00754.27, score=36.7]} {Celegans: WBGene00015646, mlt-10, [Score=161, Expect=1e-44]} {RNA1310_54710.3} {RNA815_24559}
5.	MligTC455_22248	18	0.38	Mlig455_003944	Neo: - Age: -		0.989	-	-	-	-	0.989	-	Mlig455_003944 {REF} {Length: 2739} {RNA1509_42238} {RNA1310_22279} {RNA815_50357}
6.	MligTC455_42286	59	1.22	Mlig455_042711	Neo: - Age: -	GPR83	0.977	-	-	-	-	0.977	-	Mlig455_042711 {REF} {Length: 1706} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=100.2]} {Human: ENSG00000123901, GPR83, G protein-coupled receptor 83, [Score=67.8, Expect=1e-11]} {Mouse: ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [Score=68.2, Expect=5e-12]; ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=67.4, Expect=1e-11]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=67.4, Expect=9e-12]} {Dmel: FBgn0004622, TkR99D, Tachykinin-like receptor at 99D, [Score=90.9, Expect=2e-19]} {Celegans: WBGene00021897, ser-6, SERotonin/octopamine receptor family, [Score=64.3, Expect=5e-11]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=67.8, Expect=3e-12]} {RNA1310_19087.1} {RNA815_19700}
7.	MligTC455_18736	89	1.86	Mlig455_042545	Neo: - Age: -		0.973	-	-	0.973	-	-	-	Mlig455_042545 {REF} {Length: 2311} {RNA1310_120410} {RNA815_53233}
8.	MligTC455_38292	148	3.09	Mlig455_057300	Neo: - Age: -	TUBD1	0.97	-	-	-	-	0.970	-	Mlig455_057300 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=149.3]; Tubulin like [PF13809.8, score=18.2]} {Human: ENSG00000108423, TUBD1, tubulin delta 1, [RH, Score=354, Expect=6e-118]} {Mouse: ENSMUSG00000020513, Tubd1, tubulin, delta 1, [RH, Score=354, Expect=5e-118]} {Dmel: FBgn0010097, gammaTub37C, gamma-Tubulin at 37C, [Score=134, Expect=3e-34]} {Celegans: WBGene00003171, mec-7, Tubulin beta-1 chain, [Score=134, Expect=2e-34]} {Smed: dd_Smed_v6_15819_0_4, dd_Smed_v6_15819_0_4, [RH, Score=321, Expect=1e-105]} {RNA1509_37116} {RNA1310_16834.1, RNA1509_37116} {RNA1509_37116, RNA815_17890}
9.	MligTC455_22180	88	1.84	Mlig455_006898	Neo: - Age: -		0.965	-	-	0.965	-	-	-	Mlig455_006898 {REF} {Length: 5800} {RNA1509_12420} {RNA1310_87510} {RNA815_50698}
10.	MligTC455_12798	27	0.56	Mlig455_052828	Neo: - Age: -	PCDHGA10	0.962	-	-	-	-	-	0.962	Mlig455_052828 {REF} {Length: 4445} {Pfam: Cadherin domain [PF00028.19, score=200.9]; Cadherin-like [PF16184.7, score=30.0]; Cadherin-like [PF08266.14, score=24.1]} {Human: ENSG00000253846, PCDHGA10, protocadherin gamma subfamily A, 10, [Score=180, Expect=1e-45]; ENSG00000253767, PCDHGA8, protocadherin gamma subfamily A, 8, [Score=177, Expect=1e-44]; ENSG00000261934, PCDHGA9, protocadherin gamma subfamily A, 9, [Score=174, Expect=8e-44]; ENSG00000253731, PCDHGA6, protocadherin gamma subfamily A, 6, [Score=173, Expect=1e-43]; ENSG00000204965, PCDHA5, protocadherin alpha 5, [Score=172, Expect=4e-43]; ENSG00000165194, PCDH19, protocadherin 19, [Score=172, Expect=6e-43]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=181, Expect=8e-46]; ENSMUSG00000102222, Pcdhga10, protocadherin gamma subfamily A, 10, [Score=177, Expect=7e-45]; ENSMUSG00000012819, Cdh23, cadherin 23 (otocadherin), [Score=172, Expect=1e-42]} {Dmel: FBgn0024836, stan, starry night, [Score=187, Expect=1e-47]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=173, Expect=2e-43]} {Smed: dd_Smed_v6_14523_0_1, dd_Smed_v6_14523_0_1, [RH, Score=229, Expect=1e-61]} {RNA1509_41935} {RNA1310_16730.1} {RNA815_7760}
11.	MligTC455_31068	152	3.16	Mlig455_041420	Neo: - Age: -	MAN2C1	0.961	-	-	0.961	-	-	-	Mlig455_041420 {REF} {Length: 5198} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=253.1]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=96.5]; Alpha mannosidase middle domain [PF09261.13, score=67.9]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [Score=567, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [Score=555, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [Score=683, Expect=0.0]} {RNA1509_13703, RNA1509_54285} {RNA1310_2504.1, RNA1509_54285} {RNA1509_54285, RNA815_715}
12.	MligTC455_15681	62	1.28	Mlig455_036777	Neo: - Age: -	LRFN4	0.96	-	-	0.960	-	-	-	Mlig455_036777 {REF} {Length: 5295} {Pfam: Leucine rich repeat [PF13855.8, score=38.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=35.9]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=66.2, Expect=1e-10]} {Mouse: ENSMUSG00000045045, Lrfn4, leucine rich repeat and fibronectin type III domain containing 4, [Score=62.8, Expect=9e-10]; ENSMUSG00000051228, Nyx, nyctalopin, [Score=60.5, Expect=4e-09]} {Dmel: FBgn0264089, sli, slit, [Score=50.4, Expect=6e-06]} {Smed: dd_Smed_v6_13555_0_1, dd_Smed_v6_13555_0_1, [Score=57.8, Expect=1e-08]} {RNA1509_44609} {RNA1310_12552.1} {RNA815_11539.1}
13.	MligTC455_16819	115	2.4	Mlig455_065498	Neo: Int S/G2/M Age: -	ZMYM3	0.956	-	-	-	-	0.956	-	Mlig455_065498 {REF} {Length: 3762} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=105.0]} {Human: ENSG00000147130, ZMYM3, zinc finger MYM-type containing 3, [Score=189, Expect=8e-51]} {Mouse: ENSMUSG00000031310, Zmym3, zinc finger, MYM-type 3, [RH, Score=187, Expect=3e-50]} {Dmel: FBgn0010328, woc, without children, [RH, Score=195, Expect=3e-54]} {Smed: dd_Smed_v6_3776_0_1, dd_Smed_v6_3776_0_1, [Score=184, Expect=5e-51]} {RNA1509_27397, RNA1509_44941, RNA1509_56113} {RNA1310_9267, RNA1509_27397, RNA1509_44941, RNA1509_56113} {RNA1509_27397, RNA1509_44941, RNA1509_56113, RNA815_23294}
14.	MligTC455_27750	15	0.31	Mlig455_005419	Neo: - Age: -	ALKBH3	0.956	-	-	-	-	0.956	-	Mlig455_005419 {REF} {Length: 4941} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=83.7]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=105, Expect=2e-24]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=99.4, Expect=2e-22]} {Smed: dd_Smed_v6_5051_0_1, dd_Smed_v6_5051_0_1, [Score=91.7, Expect=5e-19]} {RNA1509_23004} {RNA1310_13243, RNA1509_23004} {RNA1509_23004, RNA815_1756}
15.	MligTC455_40668	165	3.45	Mlig455_016268	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_016268 {REF} {Length: 794} {RNA1509_47841} {RNA1310_11055} {RNA815_24189}
16.	MligTC455_23479	66	1.38	Mlig455_010615	Neo: - Age: Down-Down-Up		0.954	-	-	0.954	-	-	-	Mlig455_010615 {REF} {Length: 2310} {RNA1310_33311} {RNA815_31084}
17.	MligTC455_10556	269	5.6	Mlig455_004941	Neo: - Age: - Region-enriched R3: 1.241/0.04870		0.953	-	-	0.953	-	-	-	Mlig455_004941 {REF} {Length: 386} {NoTransDecoderORF} {RNA1509_38789} {RNA1310_127953, RNA1509_38789} {RNA1509_38789, RNA815_55732}
18.	MligTC455_12383	23	0.48	Mlig455_033507	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_033507 {REF} {Length: 795} {NoTransDecoderORF} {RNA1310_83521} {RNA815_11698.2}
19.	MligTC455_17666	155	3.23	Mlig455_024776, Mlig455_066107, Mlig455_068666	Neo: - Age: -	SYDE2	0.951	-	-	-	-	0.951	-	Mlig455_024776 {REF} {Length: 4128} {Pfam: RhoGAP domain [PF00620.29, score=133.7]; Pentapeptide repeats (9 copies) [PF13599.8, score=93.3]; Pentapeptide repeats (8 copies) [PF00805.24, score=91.0]; Choristoneura fumiferana antifreeze protein (CfAFP) [PF05264.13, score=19.3]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [RH, Score=240, Expect=7e-65]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [RH, Score=236, Expect=2e-63]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [RH, Score=288, Expect=2e-80]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [RH, Score=211, Expect=4e-56]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [RH, Score=412, Expect=5e-125]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685} Mlig455_066107 {REF} {Length: 3249} {Pfam: RhoGAP domain [PF00620.29, score=134.1]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.1]; Protein of unknown function (DUF2722) [PF10846.10, score=18.6]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [RH, Score=233, Expect=3e-64]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [RH, Score=232, Expect=8e-64]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [Score=264, Expect=1e-74]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [Score=199, Expect=2e-54]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [Score=382, Expect=4e-117]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685} Mlig455_068666 {REF} {Length: 2783} {Pfam: RhoGAP domain [PF00620.29, score=103.4]} {Human: ENSG00000097096, SYDE2, synapse defective Rho GTPase homolog 2, [Score=208, Expect=6e-57]} {Mouse: ENSMUSG00000036863, Syde2, synapse defective 1, Rho GTPase, homolog 2 (C. elegans), [Score=206, Expect=1e-56]} {Dmel: FBgn0039883, RhoGAP100F, Rho GTPase activating protein at 100F, [Score=229, Expect=4e-64]} {Celegans: WBGene00006363, syd-1, Rho GTPase-activating protein syd-1, [Score=179, Expect=3e-48]} {Smed: dd_Smed_v6_12363_0_1, dd_Smed_v6_12363_0_1, [Score=332, Expect=4e-101]} {RNA1509_36084} {RNA1310_10433} {RNA815_13685}
20.	MligTC455_26100	107	2.23	Mlig455_009360	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_009360 {REF} {Length: 2626} {RNA1509_51525} {RNA1310_9237.1} {RNA815_5309}
21.	MligTC455_50655	31	0.64	Mlig455_066290	Neo: - Age: - Region-enriched R4: 3.890/0.04771		0.95	-	-	-	-	0.950	-	Mlig455_066290 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_22341} {RNA1310_75156} {RNA815_42813}