Data search


search
Exact
Search

Results for MligTC455_12800

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_12800 26 0.54 Mlig455_058775

Neo: -

Age: -

Mlig455_058775 {REF} {Length: 974} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_144763}

Cumulative graph for MligTC455_12800

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.964 0.817 0.99981 1.00000
RegionR2 -1.022 0.817 1.00000 1.00000
RegionR3 -0.332 0.817 0.99994 1.00000
RegionR4 0.732 0.817 1.00000 1.00000
RegionR5 -0.075 0.817 1.00000 1.00000
RegionR6 -0.561 0.817 0.99989 1.00000
RegionR7 -0.233 0.817 0.99990 1.00000
RegionR8 0.526 0.817 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.718 0.817 0.99989 1.00000
RegenerationR2 1.712 0.817 0.71053 0.96015
RegenerationR3 2.196 0.817 0.38384 0.79221
RegenerationR4 1.724 0.817 0.61902 0.92041
RegenerationR5 1.622 0.817 0.60340 0.91143
RegenerationR6 1.72 0.817 0.54382 0.83501
RegenerationBL 4.468 0.817 0.55759 0.91289
RegenerationTP -0.996 0.817 0.99986 1.00000


Genes with expression patterns similar to MligTC455_12800

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12800 26 0.54 Mlig455_058775

Neo: -

Age: -

2 - - - 1.000 1.000 - Mlig455_058775 {REF} {Length: 974} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_144763}
2. MligTC455_09960 34 0.7 Mlig455_040438

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_040438 {REF} {Length: 640} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_77567}
3. MligTC455_27881 54 1.12 Mlig455_062466

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.512

0.98 - - - - 0.980 - Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
4. MligTC455_40988 23 0.47 Mlig455_059710

Neo: -

Age: logFC(26M/2M)=-0.303

Regeneration-upregulated BL: 7.882

Regeneration-enriched BL: 7.882

TOGARAM1 0.979 - - - - 0.979 - Mlig455_059710 {REF} {Length: 2947} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=40.6]; Parkin co-regulated protein [PF10274.11, score=29.4]; CLASP N terminal [PF12348.10, score=28.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=28.2]; HEAT repeat [PF02985.24, score=23.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=3e-73]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=9e-76]} {Dmel: FBgn0259818, CG42399, [Score=69.3, Expect=1e-11]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=165, Expect=1e-41]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=164, Expect=3e-41]} {RNA1509_8070} {RNA1310_5990, RNA1509_8070} {RNA1509_8070, RNA815_11508}
5. MligTC455_53081 86 1.8 Mlig455_069206

Neo: Int S/G2/M

Age: -

FANCD2 0.978 - - - 0.978 - - Mlig455_069206 {REF} {Length: 5289} {TRANSSPLICED} {Pfam: Fanconi anaemia protein FancD2 nuclease [PF14631.8, score=216.2]} {Human: ENSG00000144554, FANCD2, FA complementation group D2, [RH, Score=131, Expect=5e-30]} {Mouse: ENSMUSG00000034023, Fancd2, Fanconi anemia, complementation group D2, [RH, Score=130, Expect=7e-30]} {Smed: dd_Smed_v6_12881_0_1, dd_Smed_v6_12881_0_1, [RH, Score=70.9, Expect=5e-12]} {RNA1509_14338} {RNA1310_1038} {RNA815_21338}
6. MligTC455_35373 50 1.03 Mlig455_065912, Mlig455_070019

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 7.651

Regeneration-enriched BL: 7.651

GLRA2 0.966 - - - - 0.966 -

Mlig455_065912 {REF} {Length: 3290} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=121.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=327, Expect=1e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=321, Expect=2e-104]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=319, Expect=1e-103]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=325, Expect=4e-106]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=323, Expect=3e-105]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=3e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=2e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=5e-93]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=283, Expect=3e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491}

Mlig455_070019 {REF} {Length: 4890} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=326, Expect=2e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=323, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=318, Expect=2e-103]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=325, Expect=5e-106]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=324, Expect=7e-106]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=6e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=1e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=7e-92]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=284, Expect=2e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491}
7. MligTC455_06821 8 0.17 Mlig455_032088

Neo: -

Age: -

CAPN8 0.965 - - - - 0.965 - Mlig455_032088 {REF} {Length: 3116} {Pfam: Calpain family cysteine protease [PF00648.23, score=284.3]; Calpain large subunit, domain III [PF01067.24, score=32.7]} {Human: ENSG00000203697, CAPN8, calpain 8, [Score=233, Expect=1e-68]; ENSG00000135773, CAPN9, calpain 9, [Score=229, Expect=2e-67]; ENSG00000137225, CAPN11, calpain 11, [Score=229, Expect=2e-67]} {Mouse: ENSMUSG00000031981, Capn9, calpain 9, [Score=238, Expect=6e-71]; ENSMUSG00000038599, Capn8, calpain 8, [Score=230, Expect=6e-68]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=225, Expect=2e-67]} {Celegans: WBGene00000546, clp-6, CaLPain family, [Score=216, Expect=1e-63]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=225, Expect=7e-66]} {RNA1509_52904} {RNA1310_59215} {RNA815_23274}
8. MligTC455_44823 63 1.31 Mlig455_036159

Neo: -

Age: Down-Down-Down

0.965 - - - - 0.965 - Mlig455_036159 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=290.8]; Sulfotransferase family [PF13469.8, score=46.8]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=144, Expect=4e-41]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006}
9. MligTC455_15360 138 2.88 Mlig455_070594

Neo: -

Age: -

MBLAC2 0.964 - - - - 0.964 - Mlig455_070594 {REF} {Length: 3207} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=83.0]; Beta-lactamase superfamily domain [PF12706.9, score=26.7]} {Human: ENSG00000176055, MBLAC2, metallo-beta-lactamase domain containing 2, [RH, Score=200, Expect=2e-62]} {Mouse: ENSMUSG00000051098, Mblac2, metallo-beta-lactamase domain containing 2, [RH, Score=197, Expect=3e-61]} {Dmel: FBgn0031987, CG12375, [Score=55.1, Expect=2e-08]} {Celegans: WBGene00007268, C03A3.3, [RH, Score=69.7, Expect=2e-13]} {RNA1509_39426, RNA1509_46223} {RNA1310_13925.1, RNA1509_39426, RNA1509_46223} {RNA1509_39426, RNA1509_46223, RNA815_17612}
10. MligTC455_41173 89 1.85 Mlig455_012423

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_012423 {REF} {Length: 2142} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
11. MligTC455_16664 96 1.99 Mlig455_057676

Neo: -

Age: logFC(26M/2M)=0.322

CCDC177 0.961 - - - - 0.961 - Mlig455_057676 {REF} {Length: 3257} {Pfam: Domain of unknown function (DUF4659) [PF15558.8, score=18.6]} {Human: ENSG00000267909, CCDC177, coiled-coil domain containing 177, [RH, Score=89.0, Expect=5e-18]} {Mouse: ENSMUSG00000062961, Ccdc177, coiled-coil domain containing 177, [RH, Score=84.7, Expect=7e-17]} {Smed: dd_Smed_v6_9816_0_1, dd_Smed_v6_9816_0_1, [RH, Score=60.1, Expect=9e-10]} {RNA1509_40763} {RNA1310_21314} {RNA815_13626}
12. MligTC455_10569 11 0.24 Mlig455_071080

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.760

0.954 - - - - 0.954 - Mlig455_071080 {REF} {Length: 2761} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=27.9]; Glycine rich protein [PF12810.9, score=26.4]} {RNA1509_52100} {RNA1310_9595} {RNA815_2737.1}
13. MligTC455_16465 11 0.22 Mlig455_043973

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_043973 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_68311}
14. MligTC455_33065 71 1.48 Mlig455_011937

Neo: -

Age: -

Region-enriched R4: 3.581/0.04480
Region-enriched R5: 2.856/0.01466

LNX2 0.952 - - - - 0.952 - Mlig455_011937 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=43.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.4]; PDZ domain [PF17820.3, score=26.4]; RING-type zinc-finger [PF13445.8, score=26.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.1]; TRAF-type zinc finger [PF02176.20, score=24.3]; zinc-RING finger domain [PF14634.8, score=24.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.8]; Ring finger domain [PF13639.8, score=20.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=221, Expect=2e-64]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [Score=221, Expect=9e-65]} {Dmel: FBgn0034135, Syn2, Syntrophin-like 2, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_8994_0_2, dd_Smed_v6_8994_0_2, [Score=317, Expect=6e-100]} {RNA1509_29541} {RNA1310_6562.1} {RNA815_20023}
15. MligTC455_26802 18 0.38 Mlig455_027493

Neo: -

Age: -

Region-enriched R4: 5.987/0.03988

Regeneration-upregulated BL: 7.200

Regeneration-enriched BL: 7.200

0.951 - - - - 0.951 - Mlig455_027493 {REF} {Length: 1785} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA