TomoSeq data search

Data search

Results for MligTC455_33065

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33065

71

1.48

Mlig455_011937

Neo: -

Age: -

Region-enriched R4: 3.581/0.04480
Region-enriched R5: 2.856/0.01466

LNX2

Mlig455_011937 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=43.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.4]; PDZ domain [PF17820.3, score=26.4]; RING-type zinc-finger [PF13445.8, score=26.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.1]; TRAF-type zinc finger [PF02176.20, score=24.3]; zinc-RING finger domain [PF14634.8, score=24.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.8]; Ring finger domain [PF13639.8, score=20.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=221, Expect=2e-64]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [Score=221, Expect=9e-65]} {Dmel: FBgn0034135, Syn2, Syntrophin-like 2, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_8994_0_2, dd_Smed_v6_8994_0_2, [Score=317, Expect=6e-100]} {RNA1509_29541} {RNA1310_6562.1} {RNA815_20023}

Cumulative graph for MligTC455_33065

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.322	1.493	1.00000	1.00000
RegionR2	-1.41	1.493	0.94547	1.00000
RegionR3	-4.019	1.493	0.99970	1.00000
RegionR4	3.581	1.493	0.00654	0.04480
RegionR5	2.856	1.493	0.00159	0.01466
RegionR6	1.346	1.493	0.15183	0.69486
RegionR7	1.798	1.493	0.10889	0.62654
RegionR8	1.17	1.493	0.45255	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.088	1.493	1.00000	1.00000
RegenerationR2	-0.879	1.493	0.24968	0.69637
RegenerationR3	1.767	1.493	0.17197	0.60705
RegenerationR4	-1.813	1.493	0.08923	0.46841
RegenerationR5	-2.049	1.493	0.00903	0.17156
RegenerationR6	-1.898	1.493	0.03918	0.24752
RegenerationBL	-1.112	1.493	0.33264	0.69940
RegenerationTP	-1.364	1.493	0.34622	0.78789

Genes with expression patterns similar to MligTC455_33065

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33065	71	1.48	Mlig455_011937	Neo: - Age: - Region-enriched R4: 3.581/0.04480 Region-enriched R5: 2.856/0.01466	LNX2	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_011937 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=43.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.4]; PDZ domain [PF17820.3, score=26.4]; RING-type zinc-finger [PF13445.8, score=26.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.1]; TRAF-type zinc finger [PF02176.20, score=24.3]; zinc-RING finger domain [PF14634.8, score=24.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.8]; Ring finger domain [PF13639.8, score=20.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=221, Expect=2e-64]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [Score=221, Expect=9e-65]} {Dmel: FBgn0034135, Syn2, Syntrophin-like 2, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=90.9, Expect=2e-19]} {Smed: dd_Smed_v6_8994_0_2, dd_Smed_v6_8994_0_2, [Score=317, Expect=6e-100]} {RNA1509_29541} {RNA1310_6562.1} {RNA815_20023}
2.	MligTC455_41173	89	1.85	Mlig455_012423	Neo: - Age: -		1.858	-	-	-	-	0.964	0.894	Mlig455_012423 {REF} {Length: 2142} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
3.	MligTC455_04708	132	2.74	Mlig455_037552	Neo: - Age: -		1.67	-	-	-	0.713	-	0.957	Mlig455_037552 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1509_58653} {RNA1310_34345} {RNA815_24716}
4.	MligTC455_29936	241	5.01	Mlig455_027834, Mlig455_032110, Mlig455_042040, Mlig455_053160, Mlig455_060013, Mlig455_068652	Neo: - Age: - Region-enriched R4: 2.807/0.01859		1.668	-	-	-	0.715	-	0.953	Mlig455_027834 {REF} {Length: 1462} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_032110 {REF} {Length: 440} {RNA1509_22369} {RNA1310_28603.1} {RNA815_3258.1} Mlig455_042040 {REF} {Length: 1211} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_053160 {REF} {Length: 1298} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_060013 {REF} {Length: 1463} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1} Mlig455_068652 {REF} {Length: 1496} {NoTransDecoderORF} {RNA1509_2515} {RNA1310_23566} {RNA815_3258.1}
5.	MligTC455_32579	511	10.64	Mlig455_036736	Neo: - Age: -	PTPN11	0.971	-	-	-	-	0.971	-	Mlig455_036736 {REF} {Length: 4916} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=232.7]; SH2 domain [PF00017.26, score=139.8]; SH2 domain [PF14633.8, score=28.4]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=22.2]; Tyrosine phosphatase family [PF13350.8, score=19.2]} {Human: ENSG00000179295, PTPN11, protein tyrosine phosphatase, non-receptor type 11, [RH, Score=491, Expect=6e-167]} {Mouse: ENSMUSG00000043733, Ptpn11, protein tyrosine phosphatase, non-receptor type 11, [RH, Score=491, Expect=9e-167]} {Dmel: FBgn0000382, csw, corkscrew, [RH, Score=304, Expect=3e-92]} {Celegans: WBGene00004214, ptp-2, Tyrosine-protein phosphatase non-receptor type ptp-2, [Score=302, Expect=4e-93]} {Smed: dd_Smed_v6_5785_0_1, dd_Smed_v6_5785_0_1, [RH, Score=457, Expect=1e-153]} {RNA1509_54357, RNA1509_7971} {RNA1310_26359, RNA1509_54357} {RNA1509_54357, RNA815_4691.1}
6.	MligTC455_48372	203	4.24	Mlig455_050055	Neo: - Age: Down-Up-Down, logFC(26M/2M)=3.610 Region-enriched R4: 3.425/0.00863 Region-enriched R5: 2.608/0.01110	CCDC25	0.963	-	-	-	-	0.963	-	Mlig455_050055 {REF} {Length: 843} {TRANSSPLICED} {Pfam: NFACT protein RNA binding domain [PF05670.15, score=124.7]; Secretory protein of YscJ/FliF family [PF01514.19, score=21.1]; Caldesmon [PF02029.17, score=18.6]} {Human: ENSG00000147419, CCDC25, coiled-coil domain containing 25, [RH, Score=213, Expect=3e-70]} {Mouse: ENSMUSG00000022035, Ccdc25, coiled-coil domain containing 25, [RH, Score=216, Expect=2e-71]} {Dmel: FBgn0029929, CG4593, [RH, Score=228, Expect=1e-76]} {Celegans: WBGene00013213, Y54G11A.2, [RH, Score=209, Expect=3e-69]} {Smed: dd_Smed_v6_4506_0_1, dd_Smed_v6_4506_0_1, [RH, Score=243, Expect=1e-82]} {RNA1509_19692} {RNA1310_42614, RNA1509_19692} {RNA1509_19692, RNA815_21229}
7.	MligTC455_09205	952	19.83	Mlig455_019338, Mlig455_019551	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.307	ADCY1	0.961	-	-	-	-	-	0.961	Mlig455_019338 {REF} {Length: 7699} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=169.0]; Adenylyl cyclase N-terminal extracellular and transmembrane region [PF16214.7, score=54.6]} {Human: ENSG00000164742, ADCY1, adenylate cyclase 1, [Score=290, Expect=1e-79]} {Mouse: ENSMUSG00000020431, Adcy1, adenylate cyclase 1, [Score=301, Expect=2e-83]} {Dmel: FBgn0003301, rut, rutabaga, [Score=266, Expect=4e-71]} {Celegans: WBGene00000068, acy-1, Adenylyl CYclase, [Score=115, Expect=3e-25]} {Smed: dd_Smed_v6_4439_0_1, dd_Smed_v6_4439_0_1, [RH, Score=196, Expect=6e-50]} {RNA1509_4969} {RNA1310_375.1} {RNA815_361} Mlig455_019551 {REF} {Length: 8697} {Pfam: Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=170.2]; Adenylyl cyclase N-terminal extracellular and transmembrane region [PF16214.7, score=55.5]} {Human: ENSG00000164742, ADCY1, adenylate cyclase 1, [Score=289, Expect=2e-79]} {Mouse: ENSMUSG00000020431, Adcy1, adenylate cyclase 1, [Score=300, Expect=2e-83]} {Dmel: FBgn0003301, rut, rutabaga, [Score=266, Expect=4e-71]} {Celegans: WBGene00000068, acy-1, Adenylyl CYclase, [Score=115, Expect=3e-25]} {Smed: dd_Smed_v6_4439_0_1, dd_Smed_v6_4439_0_1, [RH, Score=196, Expect=6e-50]} {RNA1509_4969} {RNA1310_375.1} {RNA815_361}
8.	MligTC455_09960	34	0.7	Mlig455_040438	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_040438 {REF} {Length: 640} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_77567}
9.	MligTC455_29668	147	3.06	Mlig455_033069	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_033069 {REF} {Length: 3514} {RNA1509_51660} {RNA1310_2804} {RNA815_25384}
10.	MligTC455_12800	26	0.54	Mlig455_058775	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_058775 {REF} {Length: 974} {NoTransDecoderORF} {RNA1509_50710} {RNA1310_144763}
11.	MligTC455_14416	21	0.43	Mlig455_023678	Neo: - Age: -	DAAM2	0.95	-	-	-	-	0.950	-	Mlig455_023678 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Diaphanous GTPase-binding Domain [PF06371.15, score=84.4]; Formin Homology 2 Domain [PF02181.25, score=65.2]; Diaphanous FH3 Domain [PF06367.18, score=36.5]} {Human: ENSG00000146122, DAAM2, dishevelled associated activator of morphogenesis 2, [Score=119, Expect=9e-27]} {Mouse: ENSMUSG00000040260, Daam2, dishevelled associated activator of morphogenesis 2, [Score=110, Expect=4e-24]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=105, Expect=1e-22]} {RNA1509_37113} {RNA1310_27273.1} {RNA815_14276}
12.	MligTC455_43032	507	10.56	Mlig455_053313	Neo: - Age: -	ESRRG	0.95	-	-	-	-	-	0.950	Mlig455_053313 {REF} {Length: 3187} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=67.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=116, Expect=2e-28]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=113, Expect=3e-27]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=116, Expect=2e-28]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=115, Expect=2e-28]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=111, Expect=7e-27]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=105, Expect=1e-24]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=89.4, Expect=3e-19]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=95.9, Expect=2e-21]} {RNA1509_18624, RNA1509_22064} {RNA1310_24044, RNA1509_18624} {RNA1509_18624, RNA815_8823}

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