Data search
Results for MligTC455_12918
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12918 | 1675 | 34.89 | Mlig455_046713, Mlig455_046854 | Neo: Irradiation Age: - Region-enriched R5: 1.000/0.01690 |
Mlig455_046713 {REF} {Length: 2334} {RNA1509_59889} {RNA1310_26281} {RNA815_23477.1} Mlig455_046854 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_11265} {RNA1310_19633} {RNA815_23477.1} |
Cumulative graph for MligTC455_12918
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.151 | 5.225 | 0.84071 | 1.00000 | |
| RegionR2 | 0.169 | 5.225 | 0.70096 | 1.00000 | |
| RegionR3 | -0.552 | 5.225 | 0.15058 | 0.65789 | |
| RegionR4 | 0.302 | 5.225 | 0.46493 | 0.79272 | |
| RegionR5 | 1 | 5.225 | 0.00192 | 0.01690 | |
| RegionR6 | -0.002 | 5.225 | 0.99518 | 1.00000 | |
| RegionR7 | -0.617 | 5.225 | 0.16465 | 0.74888 | |
| RegionR8 | -0.149 | 5.225 | 0.75913 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.54 | 5.225 | 0.61882 | 1.00000 | |
| RegenerationR2 | -0.141 | 5.225 | 0.73494 | 0.96764 | |
| RegenerationR3 | 0.881 | 5.225 | 0.05599 | 0.40583 | |
| RegenerationR4 | 0.336 | 5.225 | 0.45918 | 0.84703 | |
| RegenerationR5 | -0.003 | 5.225 | 0.99335 | 1.00000 | |
| RegenerationR6 | 0.639 | 5.225 | 0.15131 | 0.47670 | |
| RegenerationBL | 0.778 | 5.225 | 0.07142 | 0.31163 | |
| RegenerationTP | -0.039 | 5.225 | 0.93916 | 1.00000 |
Genes with expression patterns similar to MligTC455_12918
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12918 | 1675 | 34.89 | Mlig455_046713, Mlig455_046854 | Neo: Irradiation Age: - Region-enriched R5: 1.000/0.01690 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046713 {REF} {Length: 2334} {RNA1509_59889} {RNA1310_26281} {RNA815_23477.1} Mlig455_046854 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_11265} {RNA1310_19633} {RNA815_23477.1} |
|
| 2. | MligTC455_35952 | 593 | 12.36 | Mlig455_035480 | Neo: - Age: - |
UBTD2 | 2.543 | 0.838 | - | 0.736 | 0.969 | - | - | Mlig455_035480 {REF} {Length: 3176} {Pfam: Ubiquitin-binding domain [PF16455.7, score=117.0]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=28.6]; Ubiquitin family [PF00240.25, score=26.7]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=211, Expect=9e-67]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=212, Expect=1e-67]} {Dmel: FBgn0264712, CG1172, [RH, Score=197, Expect=1e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=193, Expect=3e-60]} {RNA1509_10697, RNA1509_44105, RNA1509_48920} {RNA1310_8510.1, RNA1509_10697, RNA1509_44105, RNA1509_48920} {RNA1509_10697, RNA1509_44105, RNA1509_48920, RNA815_13411} |
| 3. | MligTC455_43910 | 1899 | 39.56 | Mlig455_070443 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.058 Region-enriched R5: 1.136/0.00000 |
PRPS1 | 2.415 | - | - | 0.731 | - | 0.720 | 0.964 | Mlig455_070443 {REF} {Length: 2070} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=146.3]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=127.8]; Phosphoribosyl transferase domain [PF00156.29, score=55.3]; Uracil phosphoribosyltransferase [PF14681.8, score=28.0]} {Human: ENSG00000147224, PRPS1, phosphoribosyl pyrophosphate synthetase 1, [Score=511, Expect=0.0]; ENSG00000101911, PRPS2, phosphoribosyl pyrophosphate synthetase 2, [Score=508, Expect=0.0]} {Mouse: ENSMUSG00000079104, Prps1l3, phosphoribosyl pyrophosphate synthetase 1-like 3, [Score=511, Expect=0.0]; ENSMUSG00000031432, Prps1, phosphoribosyl pyrophosphate synthetase 1, [Score=511, Expect=0.0]; ENSMUSG00000025742, Prps2, phosphoribosyl pyrophosphate synthetase 2, [Score=508, Expect=0.0]; ENSMUSG00000092305, Prps1l1, phosphoribosyl pyrophosphate synthetase 1-like 1, [Score=503, Expect=2e-180]} {Dmel: FBgn0036030, CG6767, [Score=505, Expect=0.0]} {Celegans: WBGene00020107, R151.2, [Score=483, Expect=8e-173]} {Smed: dd_Smed_v6_2327_0_1, dd_Smed_v6_2327_0_1, [Score=481, Expect=6e-172]} {RNA1509_3684} {RNA1310_1271.2} {RNA815_5074.1} |
| 4. | MligTC455_39193 | 2183 | 45.47 | Mlig455_062607 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.251 Region-enriched R5: 1.083/0.00008 |
SND1 | 1.765 | 0.805 | - | - | - | - | 0.960 | Mlig455_062607 {REF} {Length: 6180} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=182.0]; Tudor domain [PF00567.26, score=37.9]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=696, Expect=0.0]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [RH, Score=698, Expect=0.0]} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1310_6353, RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714, RNA815_2807} |
| 5. | MligTC455_49426 | 990 | 20.63 | Mlig455_046826 | Neo: Irradiation Age: - Region-enriched R5: 1.926/0.00000 Regeneration-upregulated BL: 1.864 Regeneration-enriched BL: 1.864 |
CNOT9 | 1.752 | - | - | - | 0.795 | - | 0.957 | Mlig455_046826 {REF} {Length: 1688} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=257.2]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [Score=260, Expect=6e-87]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [Score=260, Expect=4e-87]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=239, Expect=6e-79]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [Score=213, Expect=1e-68]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [Score=269, Expect=3e-90]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.2} |
| 6. | MligTC455_43909 | 1871 | 38.97 | Mlig455_034535 | Neo: - Age: - Region-enriched R5: 1.131/0.00000 |
PRPS1 | 1.701 | - | - | 0.730 | - | - | 0.971 | Mlig455_034535 {REF} {Length: 2278} {Pfam: N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=161.2]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=147.0]; Phosphoribosyl transferase domain [PF00156.29, score=55.6]; Uracil phosphoribosyltransferase [PF14681.8, score=25.7]} {Human: ENSG00000147224, PRPS1, phosphoribosyl pyrophosphate synthetase 1, [RH, Score=552, Expect=0.0]; ENSG00000101911, PRPS2, phosphoribosyl pyrophosphate synthetase 2, [RH, Score=545, Expect=0.0]; ENSG00000229937, PRPS1L1, phosphoribosyl pyrophosphate synthetase 1-like 1, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000031432, Prps1, phosphoribosyl pyrophosphate synthetase 1, [RH, Score=552, Expect=0.0]; ENSMUSG00000079104, Prps1l3, phosphoribosyl pyrophosphate synthetase 1-like 3, [RH, Score=550, Expect=0.0]; ENSMUSG00000025742, Prps2, phosphoribosyl pyrophosphate synthetase 2, [RH, Score=544, Expect=0.0]; ENSMUSG00000092305, Prps1l1, phosphoribosyl pyrophosphate synthetase 1-like 1, [RH, Score=542, Expect=0.0]} {Dmel: FBgn0036030, CG6767, [RH, Score=543, Expect=0.0]} {Celegans: WBGene00020107, R151.2, [RH, Score=521, Expect=0.0]} {Smed: dd_Smed_v6_2327_0_1, dd_Smed_v6_2327_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_31807, RNA1509_3684, RNA1509_49548} {RNA1310_1271.2, RNA1509_31807, RNA1509_3684, RNA1509_49548} {RNA1509_31807, RNA1509_3684, RNA1509_49548, RNA815_5074.1} |
| 7. | MligTC455_06391 | 1026 | 21.37 | Mlig455_062730 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.011/0.01080 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_062730 {REF} {Length: 2469} {Pfam: R3H-associated N-terminal domain [PF13902.8, score=34.1]} {RNA1509_18629} {RNA1310_30621, RNA1509_18629} {RNA1509_18629, RNA815_27499} | |
| 8. | MligTC455_41444 | 445 | 9.26 | Mlig455_001547 | Neo: Irradiation Age: Up-Up-Down |
TRIM3 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_001547 {REF} {Length: 5402} {Pfam: NHL repeat [PF01436.23, score=78.7]; B-box zinc finger [PF00643.26, score=43.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=123, Expect=3e-28]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=122, Expect=4e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=459, Expect=1e-144]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=223, Expect=3e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_4482} {RNA1310_1955, RNA1509_4482} {RNA1509_4482, RNA815_2913.1} |
| 9. | MligTC455_20391 | 3465 | 72.19 | Mlig455_000953 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.069/0.00002 Regeneration-upregulated BL: 1.238 Regeneration-enriched BL: 1.238 |
RBBP4 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_000953 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=97.9]; WD domain, G-beta repeat [PF00400.34, score=93.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=629, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1310_7929.2, RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447, RNA815_2262.1} |
| 10. | MligTC455_18397 | 1165 | 24.27 | Mlig455_005863 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.282/0.00002 |
BDP1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_005863 {REF} {Length: 2938} {TRANSSPLICED} {Pfam: Myb DNA-binding like [PF15963.7, score=88.3]; Myb-like DNA-binding domain [PF00249.33, score=20.0]} {Human: ENSG00000274803, BDP1, B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, [RH, Score=99.8, Expect=2e-21]; ENSG00000145734, BDP1, B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, [RH, Score=99.8, Expect=2e-21]; ENSG00000273873, BDP1, B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, [RH, Score=99.8, Expect=2e-21]} {Mouse: ENSMUSG00000049658, Bdp1, B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB, [RH, Score=106, Expect=1e-23]} {Dmel: FBgn0032512, Bdp1, B double prime 1, [RH, Score=95.9, Expect=1e-20]} {Celegans: WBGene00015091, B0261.1, [RH, Score=63.5, Expect=2e-10]} {Smed: dd_Smed_v6_8936_0_1, dd_Smed_v6_8936_0_1, [RH, Score=85.1, Expect=2e-17]} {RNA1509_26672, RNA1509_5315, RNA1509_57203} {RNA1310_18434, RNA1509_26672, RNA1509_57203} {RNA1509_26672, RNA1509_57203, RNA815_17428.1} |
| 11. | MligTC455_47141 | 1638 | 34.13 | Mlig455_004635 | Neo: - Age: - |
PDAP1 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_004635 {REF} {Length: 2758} {Pfam: Casein kinase substrate phosphoprotein PP28 [PF10252.11, score=83.5]} {Human: ENSG00000106244, PDAP1, PDGFA associated protein 1, [RH, Score=80.9, Expect=2e-18]} {Mouse: ENSMUSG00000029623, Pdap1, PDGFA associated protein 1, [RH, Score=80.1, Expect=2e-18]} {Dmel: FBgn0029715, CG11444, [RH, Score=80.1, Expect=3e-18]} {RNA1509_14698, RNA1509_2203, RNA1509_22128, RNA1509_24786, RNA1509_25576, RNA1509_50471, RNA1509_56337, RNA1509_9281} {RNA1310_18665, RNA1509_14698, RNA1509_2203, RNA1509_22128, RNA1509_24786, RNA1509_25576, RNA1509_50471, RNA1509_56337, RNA1509_9281} {RNA1509_14698, RNA1509_2203, RNA1509_22128, RNA1509_24786, RNA1509_25576, RNA1509_50471, RNA1509_56337, RNA1509_9281, RNA815_8373.1} |
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