M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_06391

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06391 1026 21.37 Mlig455_062730

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.011/0.01080

 Mlig455_062730 {REF} {Length: 2469} {Pfam: R3H-associated N-terminal domain [PF13902.8, score=34.1]} {RNA1509_18629} {RNA1310_30621, RNA1509_18629} {RNA1509_18629, RNA815_27499}

Cumulative graph for MligTC455_06391

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.088 4.359 0.90845 1.00000
RegionR2 0.564 4.359 0.18143 0.53236
RegionR3 -0.106 4.359 0.77233 1.00000
RegionR4 -0.347 4.359 0.38316 0.70774
RegionR5 1.011 4.359 0.00108 0.01080
RegionR6 -0.057 4.359 0.87871 1.00000
RegionR7 -0.318 4.359 0.49032 1.00000
RegionR8 -0.834 4.359 0.15289 0.70873

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.006 4.359 0.35791 1.00000
RegenerationR2 -0.166 4.359 0.66667 0.94426
RegenerationR3 0.164 4.359 0.70506 0.94972
RegenerationR4 0.186 4.359 0.66042 0.93823
RegenerationR5 -0.212 4.359 0.57860 0.89976
RegenerationR6 0.26 4.359 0.55711 0.84340
RegenerationBL 0.049 4.359 0.92631 1.00000
RegenerationTP 0.562 4.359 0.29257 0.73785


Genes with expression patterns similar to MligTC455_06391

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06391 1026 21.37 Mlig455_062730

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.011/0.01080

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062730 {REF} {Length: 2469} {Pfam: R3H-associated N-terminal domain [PF13902.8, score=34.1]} {RNA1509_18629} {RNA1310_30621, RNA1509_18629} {RNA1509_18629, RNA815_27499}
2. MligTC455_41761 655 13.65 Mlig455_020225

Neo: Irradiation

Age: -

Region-enriched R5: 1.227/0.00118

 PTPRZ1 1.819 - - - 0.859 - 0.960 Mlig455_020225 {REF} {Length: 5464} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=409.3]; Fibronectin type III domain [PF00041.23, score=83.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=24.2]} {Human: ENSG00000106278, PTPRZ1, protein tyrosine phosphatase, receptor type Z1, [RH, Score=492, Expect=4e-149]; ENSG00000144724, PTPRG, protein tyrosine phosphatase, receptor type G, [RH, Score=492, Expect=4e-149]} {Mouse: ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [RH, Score=491, Expect=6e-145]; ENSMUSG00000021745, Ptprg, protein tyrosine phosphatase, receptor type, G, [RH, Score=485, Expect=1e-146]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [RH, Score=469, Expect=9e-143]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=348, Expect=9e-101]} {Smed: dd_Smed_v6_6997_0_1, dd_Smed_v6_6997_0_1, [RH, Score=564, Expect=9e-177]} {RNA1509_4639} {RNA1310_810} {RNA815_3651}
3. MligTC455_26789 665 13.84 Mlig455_009613

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 1.781/0.00367

 PCNT 1.807 - - - 0.845 0.962 - Mlig455_009613 {REF} {Length: 10889} {TRANSSPLICED} {Pfam: Pericentrin-AKAP-450 domain of centrosomal targeting protein [PF10495.11, score=43.6]} {Human: ENSG00000160299, PCNT, pericentrin, [Score=58.9, Expect=1e-07]} {Mouse: ENSMUSG00000001151, Pcnt, pericentrin (kendrin), [Score=56.6, Expect=5e-07]} {RNA1509_25867, RNA1509_51562, RNA1509_5275} {RNA1310_421, RNA1509_25867, RNA1509_51562} {RNA1509_25867, RNA1509_51562, RNA815_407.1}
4. MligTC455_48015 545 11.36 Mlig455_020773

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.746/0.01904

 TMED5 1.731 - - 0.769 - - 0.962 Mlig455_020773 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=69.7]} {Human: ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.2, Expect=4e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=72.8, Expect=3e-14]} {Dmel: FBgn0264389, opm, opossum, [RH, Score=79.3, Expect=1e-16]} {Celegans: WBGene00010670, K08E4.6, [RH, Score=88.2, Expect=1e-19]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [RH, Score=99.0, Expect=4e-23]} {RNA1509_5946} {RNA1310_10367} {RNA815_5040.1}
5. MligTC455_43909 1871 38.97 Mlig455_034535

Neo: -

Age: -

Region-enriched R5: 1.131/0.00000

 PRPS1 1.721 0.743 - - - - 0.978 Mlig455_034535 {REF} {Length: 2278} {Pfam: N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=161.2]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=147.0]; Phosphoribosyl transferase domain [PF00156.29, score=55.6]; Uracil phosphoribosyltransferase [PF14681.8, score=25.7]} {Human: ENSG00000147224, PRPS1, phosphoribosyl pyrophosphate synthetase 1, [RH, Score=552, Expect=0.0]; ENSG00000101911, PRPS2, phosphoribosyl pyrophosphate synthetase 2, [RH, Score=545, Expect=0.0]; ENSG00000229937, PRPS1L1, phosphoribosyl pyrophosphate synthetase 1-like 1, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000031432, Prps1, phosphoribosyl pyrophosphate synthetase 1, [RH, Score=552, Expect=0.0]; ENSMUSG00000079104, Prps1l3, phosphoribosyl pyrophosphate synthetase 1-like 3, [RH, Score=550, Expect=0.0]; ENSMUSG00000025742, Prps2, phosphoribosyl pyrophosphate synthetase 2, [RH, Score=544, Expect=0.0]; ENSMUSG00000092305, Prps1l1, phosphoribosyl pyrophosphate synthetase 1-like 1, [RH, Score=542, Expect=0.0]} {Dmel: FBgn0036030, CG6767, [RH, Score=543, Expect=0.0]} {Celegans: WBGene00020107, R151.2, [RH, Score=521, Expect=0.0]} {Smed: dd_Smed_v6_2327_0_1, dd_Smed_v6_2327_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_31807, RNA1509_3684, RNA1509_49548} {RNA1310_1271.2, RNA1509_31807, RNA1509_3684, RNA1509_49548} {RNA1509_31807, RNA1509_3684, RNA1509_49548, RNA815_5074.1}
6. MligTC455_43910 1899 39.56 Mlig455_070443

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.058

Region-enriched R5: 1.136/0.00000

 PRPS1 1.719 0.737 - - - - 0.982 Mlig455_070443 {REF} {Length: 2070} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=146.3]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=127.8]; Phosphoribosyl transferase domain [PF00156.29, score=55.3]; Uracil phosphoribosyltransferase [PF14681.8, score=28.0]} {Human: ENSG00000147224, PRPS1, phosphoribosyl pyrophosphate synthetase 1, [Score=511, Expect=0.0]; ENSG00000101911, PRPS2, phosphoribosyl pyrophosphate synthetase 2, [Score=508, Expect=0.0]} {Mouse: ENSMUSG00000079104, Prps1l3, phosphoribosyl pyrophosphate synthetase 1-like 3, [Score=511, Expect=0.0]; ENSMUSG00000031432, Prps1, phosphoribosyl pyrophosphate synthetase 1, [Score=511, Expect=0.0]; ENSMUSG00000025742, Prps2, phosphoribosyl pyrophosphate synthetase 2, [Score=508, Expect=0.0]; ENSMUSG00000092305, Prps1l1, phosphoribosyl pyrophosphate synthetase 1-like 1, [Score=503, Expect=2e-180]} {Dmel: FBgn0036030, CG6767, [Score=505, Expect=0.0]} {Celegans: WBGene00020107, R151.2, [Score=483, Expect=8e-173]} {Smed: dd_Smed_v6_2327_0_1, dd_Smed_v6_2327_0_1, [Score=481, Expect=6e-172]} {RNA1509_3684} {RNA1310_1271.2} {RNA815_5074.1}
7. MligTC455_29019 2780 57.92 Mlig455_047569

Neo: -

Age: -

Regeneration-enriched R3: 3.253
Regeneration-enriched TP: 3.198
Regeneration-enriched BL: 3.042
Regeneration-enriched R2: 2.854

 1.712 - - - 0.954 - 0.758 Mlig455_047569 {REF} {Length: 4815} {TRANSSPLICED} {RNA1509_45988} {RNA1310_79684} {RNA815_44017}
8. MligTC455_16422 643 13.39 Mlig455_022617

Neo: Irradiation

Age: -

Region-enriched R5: 1.388/0.00048

 PFAS 1.703 - - 0.753 - - 0.950 Mlig455_022617 {REF} {Length: 4732} {TRANSSPLICED} {Pfam: CobB/CobQ-like glutamine amidotransferase domain [PF13507.8, score=279.2]; AIR synthase related protein, C-terminal domain [PF02769.24, score=102.4]; Formylglycinamide ribonucleotide amidotransferase linker domain [PF18072.3, score=41.3]} {Human: ENSG00000178921, PFAS, phosphoribosylformylglycinamidine synthase, [RH, Score=988, Expect=0.0]} {Mouse: ENSMUSG00000020899, Pfas, phosphoribosylformylglycinamidine synthase (FGAR amidotransferase), [RH, Score=1011, Expect=0.0]} {Dmel: FBgn0000052, ade2, adenosine 2, [RH, Score=898, Expect=0.0]} {Celegans: WBGene00008654, F10F2.2, Probable phosphoribosylformylglycinamidine synthase, [RH, Score=926, Expect=0.0]} {Smed: dd_Smed_v6_5130_0_1, dd_Smed_v6_5130_0_1, [RH, Score=950, Expect=0.0]} {RNA1509_55250, RNA1509_6392} {RNA1310_1527.1, RNA1509_55250} {RNA1509_55250, RNA815_842.1}
9. MligTC455_03206 655 13.64 Mlig455_035502

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.730/0.01050

 PGAP3 1.702 - - - - 0.751 0.951 Mlig455_035502 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Per1-like family [PF04080.15, score=272.7]} {Human: ENSG00000161395, PGAP3, post-GPI attachment to proteins 3, [RH, Score=194, Expect=3e-59]} {Mouse: ENSMUSG00000038208, Pgap3, post-GPI attachment to proteins 3, [RH, Score=203, Expect=4e-63]} {Dmel: FBgn0033088, PGAP3, Post-GPI attachment to proteins 3, [RH, Score=231, Expect=1e-73]} {Celegans: WBGene00019806, R01B10.4, [RH, Score=131, Expect=1e-35]} {Smed: dd_Smed_v6_11282_0_3, dd_Smed_v6_11282_0_3, [RH, Score=216, Expect=2e-68]} {RNA1509_18759, RNA1509_28027} {RNA1310_9223.1, RNA1509_18759, RNA1509_28027} {RNA1509_18759, RNA1509_28027, RNA815_12781}
10. MligTC455_39007 2184 45.51 Mlig455_062119, Mlig455_069663

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.418/0.00014

Regeneration-upregulated BL: 1.963

Regeneration-enriched BL: 1.963

 NUP210, NUP210L 1.679 - 0.710 - - - 0.969

Mlig455_062119 {REF} {Length: 7147} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=26.5]} {Human: ENSG00000132182, NUP210, nucleoporin 210, [RH, Score=536, Expect=2e-159]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=2e-149]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [RH, Score=243, Expect=2e-64]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [Score=248, Expect=5e-66]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [RH, Score=549, Expect=1e-163]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}

Mlig455_069663 {REF} {Length: 6507} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=22.5]} {Human: ENSG00000143552, NUP210L, nucleoporin 210 like, [Score=473, Expect=8e-137]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=5e-148]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [Score=224, Expect=2e-58]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [RH, Score=226, Expect=6e-59]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [Score=538, Expect=2e-158]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}
11. MligTC455_41444 445 9.26 Mlig455_001547

Neo: Irradiation

Age: Up-Up-Down

 TRIM3 0.977 - - - - - 0.977 Mlig455_001547 {REF} {Length: 5402} {Pfam: NHL repeat [PF01436.23, score=78.7]; B-box zinc finger [PF00643.26, score=43.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=123, Expect=3e-28]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=122, Expect=4e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=459, Expect=1e-144]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=223, Expect=3e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_4482} {RNA1310_1955, RNA1509_4482} {RNA1509_4482, RNA815_2913.1}
12. MligTC455_12918 1675 34.89 Mlig455_046713, Mlig455_046854

Neo: Irradiation

Age: -

Region-enriched R5: 1.000/0.01690

 0.976 - - - - - 0.976

Mlig455_046713 {REF} {Length: 2334} {RNA1509_59889} {RNA1310_26281} {RNA815_23477.1}

Mlig455_046854 {REF} {Length: 2397} {TRANSSPLICED} {RNA1509_11265} {RNA1310_19633} {RNA815_23477.1}
13. MligTC455_04474 114 2.37 Mlig455_039605

Neo: -

Age: logFC(26M/2M)=-0.389

Region-enriched R8: 5.608/0.00012
Region-enriched R7: 3.934/0.02769

 HMCN1 0.972 - - - 0.972 - - Mlig455_039605 {REF} {Length: 4319} {Pfam: Thrombospondin type 1 domain [PF00090.21, score=405.5]; Spondin-like TSP1 domain [PF19028.2, score=340.3]; Thrombospondin type 1 domain [PF19030.2, score=125.1]; Scavenger receptor cysteine-rich domain [PF00530.20, score=57.7]; CCN3 Nov like TSP1 domain [PF19035.2, score=48.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=292, Expect=4e-80]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=288, Expect=7e-79]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=156, Expect=3e-38]} {Celegans: WBGene00016468, C36B7.5, [RH, Score=199, Expect=7e-52]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=264, Expect=9e-72]} {RNA1509_12135} {RNA1310_3277, RNA1509_12135} {RNA1509_12135, RNA815_5276}
14. MligTC455_20735 524 10.92 Mlig455_001230, Mlig455_034590

Neo: -

Age: Up-Down-Down

 DNAH17 0.968 - - - - 0.968 -

Mlig455_001230 {REF} {Length: 15133} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=453.0]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.3]; P-loop containing dynein motor region D4 [PF12780.9, score=304.2]; ATP-binding dynein motor region [PF12781.9, score=281.8]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.0]; AAA+ lid domain [PF17857.3, score=124.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.2]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.3]; AAA domain [PF13401.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.1]; AAA domain [PF13238.8, score=24.4]; AAA ATPase domain [PF13191.8, score=22.9]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5109, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5036, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5137, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5062, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4904, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1042, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5484, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1, RNA1509_1474} {RNA1509_1474, RNA815_35}

Mlig455_034590 {REF} {Length: 15079} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=454.2]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.2]; P-loop containing dynein motor region D4 [PF12780.9, score=304.8]; ATP-binding dynein motor region [PF12781.9, score=281.1]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.1]; AAA+ lid domain [PF17857.3, score=124.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.5]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.4]; AAA domain [PF13401.8, score=32.8]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.2]; AAA domain [PF13238.8, score=25.8]; AAA ATPase domain [PF13191.8, score=22.7]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5106, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5032, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5136, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5061, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4905, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1040, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5483, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1} {RNA815_35}
15. MligTC455_53385 331 6.89 Mlig455_044301

Neo: -

Age: -

Region-enriched R5: 1.849/0.00027

 ZNF398 0.968 - - - - - 0.968 Mlig455_044301 {REF} {Length: 2830} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=34.7]; Zinc-finger double domain [PF13465.8, score=27.3]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000197024, ZNF398, zinc finger protein 398, [Score=67.0, Expect=2e-11]; ENSG00000177125, ZBTB34, zinc finger and BTB domain containing 34, [Score=66.2, Expect=4e-11]; ENSG00000163848, ZNF148, zinc finger protein 148, [Score=65.5, Expect=1e-10]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=65.1, Expect=2e-10]; ENSG00000185278, ZBTB37, zinc finger and BTB domain containing 37, [Score=64.3, Expect=2e-10]; ENSG00000160062, ZBTB8A, zinc finger and BTB domain containing 8A, [Score=64.3, Expect=2e-10]; ENSG00000170265, ZNF282, zinc finger protein 282, [Score=63.9, Expect=2e-10]} {Mouse: ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=67.4, Expect=1e-11]; ENSMUSG00000068966, Zbtb34, zinc finger and BTB domain containing 34, [Score=66.2, Expect=3e-11]; ENSMUSG00000022811, Zfp148, zinc finger protein 148, [Score=65.5, Expect=7e-11]; ENSMUSG00000043467, Zbtb37, zinc finger and BTB domain containing 37, [Score=64.3, Expect=1e-10]; ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=64.3, Expect=2e-10]; ENSMUSG00000025821, Zfp282, zinc finger protein 282, [Score=64.3, Expect=1e-10]} {Dmel: FBgn0261434, hkb, huckebein, [Score=69.7, Expect=6e-13]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=63.9, Expect=3e-11]} {Smed: dd_Smed_v6_15473_0_1, dd_Smed_v6_15473_0_1, [RH, Score=106, Expect=7e-26]} {RNA1509_16547} {RNA1310_10302} {RNA815_15237}
16. MligTC455_16153 266 5.54 Mlig455_024955

Neo: Irradiation

Age: -

 CCNH 0.966 - - - - - 0.966 Mlig455_024955 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=37.8]; Cyclin C-terminal domain [PF16899.7, score=33.0]} {Human: ENSG00000134480, CCNH, cyclin H, [RH, Score=161, Expect=8e-47]} {Mouse: ENSMUSG00000021548, Ccnh, cyclin H, [RH, Score=159, Expect=3e-46]} {Dmel: FBgn0022936, CycH, Cyclin H, [RH, Score=199, Expect=2e-61]} {Celegans: WBGene00021714, cyh-1, CYclin H, [RH, Score=109, Expect=2e-27]} {Smed: dd_Smed_v6_10725_0_1, dd_Smed_v6_10725_0_1, [RH, Score=147, Expect=5e-42]} {RNA1509_17134} {RNA1310_27615.1} {RNA815_15261}
17. MligTC455_49426 990 20.63 Mlig455_046826

Neo: Irradiation

Age: -

Region-enriched R5: 1.926/0.00000

Regeneration-upregulated BL: 1.864

Regeneration-enriched BL: 1.864

 CNOT9 0.966 - - - - - 0.966 Mlig455_046826 {REF} {Length: 1688} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=257.2]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [Score=260, Expect=6e-87]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [Score=260, Expect=4e-87]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=239, Expect=6e-79]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [Score=213, Expect=1e-68]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [Score=269, Expect=3e-90]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.2}
18. MligTC455_23382 964 20.08 Mlig455_043120

Neo: Int S/G2/M

Age: -

 RANBP2 0.963 - - - - - 0.963 Mlig455_043120 {REF} {Length: 5304} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=29.4]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=75.5, Expect=7e-13]} {Mouse: ENSMUSG00000021374, Nup153, nucleoporin 153, [RH, Score=82.4, Expect=3e-15]} {Dmel: FBgn0061200, Nup153, Nucleoporin 153kD, [RH, Score=105, Expect=2e-22]} {RNA1509_10649} {RNA1310_2230.1} {RNA815_346.1}
19. MligTC455_30950 282 5.87 Mlig455_008403

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.890/0.00007

 0.963 - 0.963 - - - - Mlig455_008403 {REF} {Length: 1659} {Pfam: Cupin superfamily (DUF985) [PF06172.13, score=102.7]} {RNA1509_57035} {RNA1310_31259, RNA1509_57035} {RNA1509_57035, RNA815_14348}
20. MligTC455_47738 719 14.98 Mlig455_033682

Neo: -

Age: Down-Up-Up

 0.963 - - - 0.963 - - Mlig455_033682 {REF} {Length: 2679} {TRANSSPLICED} {Pfam: Sleepless protein [PF17064.7, score=32.6]} {Smed: dd_Smed_v6_3412_0_1, dd_Smed_v6_3412_0_1, [Score=141, Expect=3e-44]} {RNA1509_28967} {RNA1310_27590} {RNA815_17765}
21. MligTC455_35722 1188 24.76 Mlig455_056069, Mlig455_061584

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.153/0.01428

 0.962 - - - - - 0.962

Mlig455_056069 {REF} {Length: 2813} {TRANSSPLICED} {RNA1509_5890} {RNA1310_6565, RNA1509_5890} {RNA1509_5890, RNA815_1986}

Mlig455_061584 {REF} {Length: 2832} {RNA1509_5890} {RNA1310_6565} {RNA815_1986}
22. MligTC455_32291 533 11.1 Mlig455_035366

Neo: -

Age: Up-Down-Down

 ZNFX1 0.959 - - - - 0.959 - Mlig455_035366 {REF} {Length: 7311} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=118.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=111.1]; AAA domain [PF13086.8, score=81.4]; AAA domain [PF13245.8, score=33.0]; AAA domain [PF13604.8, score=29.6]; PhoH-like protein [PF02562.18, score=18.2]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=378, Expect=9e-106]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=373, Expect=2e-104]} {Dmel: FBgn0039165, CG6204, [Score=162, Expect=3e-40]} {Celegans: WBGene00014208, ZK1067.2, [Score=220, Expect=2e-57]} {Smed: dd_Smed_v6_10696_0_1, dd_Smed_v6_10696_0_1, [Score=362, Expect=1e-101]} {RNA1509_3888, RNA1509_48765} {RNA1310_460.1, RNA1509_48765} {RNA1509_48765, RNA815_987}
23. MligTC455_39193 2183 45.47 Mlig455_062607

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.251

Region-enriched R5: 1.083/0.00008

 SND1 0.958 - - - - - 0.958 Mlig455_062607 {REF} {Length: 6180} {Pfam: Staphylococcal nuclease homologue [PF00565.19, score=182.0]; Tudor domain [PF00567.26, score=37.9]} {Human: ENSG00000197157, SND1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=698, Expect=0.0]} {Mouse: ENSMUSG00000001424, Snd1, staphylococcal nuclease and tudor domain containing 1, [RH, Score=696, Expect=0.0]} {Dmel: FBgn0035121, Tudor-SN, Tudor staphylococcal nuclease, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00006626, tsn-1, Tudor Staphylococcal Nuclease homolog, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_906_0_1, dd_Smed_v6_906_0_1, [RH, Score=698, Expect=0.0]} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1310_6353, RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714} {RNA1509_16100, RNA1509_16974, RNA1509_18184, RNA1509_22268, RNA1509_3189, RNA1509_38948, RNA1509_54714, RNA815_2807}
24. MligTC455_23381 926 19.3 Mlig455_026138

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=3.458

 RANBP2 0.957 - - - - - 0.957 Mlig455_026138 {REF} {Length: 2166} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=29.4]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=75.5, Expect=7e-13]} {Mouse: ENSMUSG00000021374, Nup153, nucleoporin 153, [RH, Score=82.4, Expect=3e-15]} {Dmel: FBgn0061200, Nup153, Nucleoporin 153kD, [RH, Score=105, Expect=2e-22]} {RNA1509_10649} {RNA1310_2230.1} {RNA815_346.1}
25. MligTC455_49425 1383 28.82 Mlig455_046733, Mlig455_046739

Neo: Irradiation

Age: -

Region-specific R5: 2.321

Region-enriched R5: 2.007/0.00000

 CNOT9 0.956 - - - - - 0.956

Mlig455_046733 {REF} {Length: 1943} {TRANSSPLICED} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=396.4]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [RH, Score=401, Expect=2e-141]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [RH, Score=401, Expect=1e-141]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=372, Expect=4e-130]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=344, Expect=9e-119]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [RH, Score=411, Expect=3e-145]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.1}

Mlig455_046739 {REF} {Length: 2223} {TRANSSPLICED} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=396.4]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [RH, Score=401, Expect=2e-141]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [RH, Score=401, Expect=1e-141]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=372, Expect=4e-130]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=344, Expect=9e-119]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [RH, Score=411, Expect=3e-145]} {RNA1509_35026, RNA1509_38672, RNA1509_5386} {RNA1310_13428.2, RNA1509_35026, RNA1509_38672, RNA1509_5386} {RNA1509_35026, RNA1509_38672, RNA1509_5386, RNA815_5416.1}
26. MligTC455_41697 663 13.82 Mlig455_063046

Neo: Neoblast

Age: -

Region-enriched R5: 1.014/0.04339

 ITPA 0.955 - - - - - 0.955 Mlig455_063046 {REF} {Length: 1344} {TRANSSPLICED} {Pfam: Ham1 family [PF01725.18, score=179.2]} {Human: ENSG00000125877, ITPA, inosine triphosphatase, [RH, Score=182, Expect=4e-58]} {Mouse: ENSMUSG00000074797, Itpa, inosine triphosphatase (nucleoside triphosphate pyrophosphatase), [RH, Score=186, Expect=6e-60]} {Dmel: FBgn0031663, CG8891, [RH, Score=186, Expect=6e-60]} {Celegans: WBGene00001823, hap-1, Inosine triphosphate pyrophosphatase, [RH, Score=217, Expect=2e-72]} {Smed: dd_Smed_v6_11572_0_1, dd_Smed_v6_11572_0_1, [RH, Score=112, Expect=2e-31]} {RNA1509_16167} {RNA1310_22286.1} {RNA815_9713.1}
27. MligTC455_17952 858 17.88 Mlig455_019484, Mlig455_060545

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_019484 {REF} {Length: 4698} {TRANSSPLICED} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_4363, RNA1509_50959} {RNA1310_1338, RNA1509_50959} {RNA1509_50959, RNA815_4509}

Mlig455_060545 {REF} {Length: 4765} {Dmel: FBgn0261934, dikar, [Score=51.2, Expect=8e-06]} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [RH, Score=100, Expect=2e-21]} {RNA1509_4363} {RNA1310_1338} {RNA815_4509}
28. MligTC455_40792 548 11.41 Mlig455_014009

Neo: -

Age: -

Region-enriched R5: 1.451/0.00073

 CCDC6 0.954 - - - - - 0.954 Mlig455_014009 {REF} {Length: 2755} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein H4 (DUF2046) [PF09755.11, score=334.1]; CENP-Q, a CENPA-CAD centromere complex subunit [PF13094.8, score=23.6]} {Human: ENSG00000108091, CCDC6, coiled-coil domain containing 6, [RH, Score=274, Expect=1e-87]} {Mouse: ENSMUSG00000048701, Ccdc6, coiled-coil domain containing 6, [RH, Score=276, Expect=8e-89]} {Dmel: FBgn0036685, CG6664, [RH, Score=240, Expect=4e-74]} {Celegans: WBGene00011645, T09B9.4, [RH, Score=92.8, Expect=2e-20]} {Smed: dd_Smed_v6_6765_0_1, dd_Smed_v6_6765_0_1, [RH, Score=250, Expect=6e-79]} {RNA1509_36276, RNA1509_44828, RNA1509_48420, RNA1509_53667, RNA1509_8527} {RNA1310_18598, RNA1509_36276, RNA1509_44828, RNA1509_48420, RNA1509_53667, RNA1509_8527} {RNA1509_36276, RNA1509_44828, RNA1509_48420, RNA1509_53667, RNA1509_8527, RNA815_15333}
29. MligTC455_50331 348 7.26 Mlig455_045355

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R2: 1.911/0.04277
Region-enriched R5: 1.493/0.00190

 TGFBR1 0.954 - - - - - 0.954 Mlig455_045355 {REF} {Length: 2444} {Pfam: Protein kinase domain [PF00069.27, score=69.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.4]; ABC1 atypical kinase-like domain [PF03109.18, score=32.2]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.5]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=180, Expect=8e-51]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=174, Expect=1e-48]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=181, Expect=1e-51]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=174, Expect=2e-48]} {Dmel: FBgn0011300, babo, baboon, [Score=180, Expect=5e-50]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=142, Expect=4e-36]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=177, Expect=8e-49]} {RNA1509_17304, RNA1509_34135} {RNA1310_10744, RNA1509_34135} {RNA1509_34135, RNA815_11070}
30. MligTC455_20391 3465 72.19 Mlig455_000953

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.069/0.00002

Regeneration-upregulated BL: 1.238

Regeneration-enriched BL: 1.238

 RBBP4 0.953 - - - - - 0.953 Mlig455_000953 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=97.9]; WD domain, G-beta repeat [PF00400.34, score=93.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=629, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1310_7929.2, RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447, RNA815_2262.1}
31. MligTC455_53835 678 14.12 Mlig455_038053

Neo: -

Age: -

 SLC22A5 0.953 - - - 0.953 - - Mlig455_038053 {REF} {Length: 3178} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=104.5]; Major Facilitator Superfamily [PF07690.18, score=81.0]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=186, Expect=2e-51]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=190, Expect=4e-53]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=185, Expect=2e-51]} {Dmel: FBgn0038407, CG6126, [Score=191, Expect=2e-53]} {Celegans: WBGene00003843, oct-2, Organic Cation Transporter; Organic cation transporter, [Score=169, Expect=7e-45]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=179, Expect=3e-49]} {RNA1509_52412} {RNA1310_15844.1, RNA1509_52412} {RNA1509_52412, RNA815_8229.1}
32. MligTC455_09814 575 11.98 Mlig455_037640

Neo: -

Age: -

Region-enriched R5: 1.307/0.00616

 0.952 - - - 0.952 - - Mlig455_037640 {REF} {Length: 4250} {RNA1509_16137} {RNA1310_16604, RNA1509_16137} {RNA1509_16137, RNA815_16640}
33. MligTC455_52415 654 13.61 Mlig455_044484

Neo: Irradiation

Age: -

Region-enriched R5: 1.061/0.00047

 0.952 - - - - - 0.952 Mlig455_044484 {REF} {Length: 2469} {TRANSSPLICED} {RNA1509_36525} {RNA1310_44640.1} {RNA815_18660}
34. MligTC455_27383 391 8.14 Mlig455_015315, Mlig455_016513, Mlig455_032996, Mlig455_047371, Mlig455_052716, Mlig455_062076

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.778/0.03706

 0.95 - - - - 0.950 -

Mlig455_015315 {REF} {Length: 780} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_016513 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_032996 {REF} {Length: 651} {RNA1509_47082} {RNA1310_18896.2} {RNA815_9379}

Mlig455_047371 {REF} {Length: 2669} {TRANSSPLICED} {RNA1509_47082} {RNA1310_9596, RNA1509_47082} {RNA1509_47082, RNA815_8903}

Mlig455_052716 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_062076 {REF} {Length: 767} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}
35. MligTC455_37644 463 9.64 Mlig455_009079, Mlig455_058102

Neo: -

Age: -

 0.95 - - - 0.950 - -

Mlig455_009079 {REF} {Length: 1770} {Pfam: TMEM154 protein family [PF15102.8, score=21.3]} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1}

Mlig455_058102 {REF} {Length: 1746} {Pfam: TMEM154 protein family [PF15102.8, score=21.6]} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1}
36. MligTC455_48473 1799 37.49 Mlig455_025739

Neo: Int S/G2/M

Age: -

 0.95 - - - - - 0.950 Mlig455_025739 {REF} {Length: 1910} {TRANSSPLICED} {RNA1509_2480} {RNA1310_15034, RNA1509_2480} {RNA1509_2480, RNA815_5643}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA