Data search


search
Exact
Search

Results for MligTC455_13015

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13015 100 2.08 Mlig455_052363

Neo: -

Age: -

Mlig455_052363 {REF} {Length: 1915} {RNA1509_42540} {RNA1310_52436} {RNA815_30873}

Cumulative graph for MligTC455_13015

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.29 2.013 0.51079 1.00000
RegionR2 1.432 2.013 0.09035 0.36866
RegionR3 0.666 2.013 0.26189 0.80564
RegionR4 0.59 2.013 0.45638 0.78455
RegionR5 -0.658 2.013 0.31237 0.65123
RegionR6 -0.482 2.013 0.51348 1.00000
RegionR7 -1.452 2.013 0.17936 0.77592
RegionR8 -1.385 2.013 0.28039 0.90607

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.868 2.013 0.39091 1.00000
RegenerationR2 -1.73 2.013 0.00531 0.11506
RegenerationR3 -1.395 2.013 0.05767 0.41226
RegenerationR4 -0.319 2.013 0.67872 0.94544
RegenerationR5 -1.144 2.013 0.13028 0.53611
RegenerationR6 -0.976 2.013 0.30785 0.65617
RegenerationBL -3.485 2.013 0.18147 0.51070
RegenerationTP -3.942 2.013 0.10903 0.50880


Genes with expression patterns similar to MligTC455_13015

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13015 100 2.08 Mlig455_052363

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_052363 {REF} {Length: 1915} {RNA1509_42540} {RNA1310_52436} {RNA815_30873}
2. MligTC455_47173 255 5.32 Mlig455_047769

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.081/0.00565

TCF7L2 1.765 0.778 - 0.987 - - - Mlig455_047769 {REF} {Length: 4480} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=75.0]; HMG-box domain [PF09011.12, score=30.1]} {Human: ENSG00000148737, TCF7L2, transcription factor 7 like 2, [RH, Score=190, Expect=1e-50]; ENSG00000081059, TCF7, transcription factor 7, [RH, Score=188, Expect=5e-51]} {Mouse: ENSMUSG00000024985, Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box, [Score=187, Expect=5e-50]} {Dmel: FBgn0085432, pan, pangolin, [RH, Score=189, Expect=8e-50]} {Celegans: WBGene00004077, pop-1, [RH, Score=120, Expect=1e-28]} {Smed: dd_Smed_v6_8152_0_1, dd_Smed_v6_8152_0_1, [RH, Score=194, Expect=2e-52]} {RNA1509_59103, RNA1509_7090} {RNA1310_2735.1, RNA1509_59103} {RNA1509_59103, RNA815_5131}
3. MligTC455_30990 58 1.21 Mlig455_001766, Mlig455_029619, Mlig455_037062, Mlig455_039170, Mlig455_045433, Mlig455_051274, Mlig455_057154

Neo: -

Age: -

Region-enriched R4: 2.788/0.04410

1.694 - - 0.744 0.950 - -

Mlig455_001766 {REF} {Length: 1567} {Pfam: Transposase protein [PF12017.10, score=21.1]} {RNA1509_42786} {RNA1310_18602.1} {RNA815_23925}

Mlig455_029619 {REF} {Length: 1552} {Pfam: Transposase protein [PF12017.10, score=27.5]} {RNA1509_42786} {RNA1310_18602.1} {RNA815_27173}

Mlig455_037062 {REF} {Length: 2608} {Pfam: THAP domain [PF05485.14, score=33.1]} {RNA1509_42786} {RNA1310_33625.3} {RNA815_10117.1}

Mlig455_039170 {REF} {Length: 1786} {Pfam: THAP domain [PF05485.14, score=30.0]} {Celegans: WBGene00219319, H25P06.5, [RH, Score=50.4, Expect=1e-07]} {RNA1509_6474} {RNA1310_23018.1} {RNA815_28181.2}

Mlig455_045433 {REF} {Length: 2143} {RNA1509_42786} {RNA1310_41897} {RNA815_12088}

Mlig455_051274 {REF} {Length: 1163} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6474} {RNA1310_23018.2} {RNA815_27173}

Mlig455_057154 {REF} {Length: 392} {Pfam: THAP domain [PF05485.14, score=33.9]} {RNA1310_18602.1} {RNA815_27173}
4. MligTC455_07769 13 0.27 Mlig455_003660, Mlig455_003871

Neo: Int S/G2/M

Age: -

SETMAR 0.996 - - - - 0.996 -

Mlig455_003660 {REF} {Length: 1236} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=35.3]; Transposase (partial DDE domain) [PF01359.20, score=24.6]; Homeodomain-like domain [PF13565.8, score=22.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=119, Expect=6e-31]} {Smed: dd_Smed_v6_9592_1_13, dd_Smed_v6_9592_1_13, [RH, Score=46.6, Expect=5e-07]} {RNA1509_51224} {RNA1310_3855.1} {RNA815_19895}

Mlig455_003871 {REF} {Length: 1355} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=35.3]; Transposase (partial DDE domain) [PF01359.20, score=24.6]; Homeodomain-like domain [PF13565.8, score=22.6]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=119, Expect=6e-31]} {Smed: dd_Smed_v6_9592_1_13, dd_Smed_v6_9592_1_13, [RH, Score=46.6, Expect=5e-07]} {RNA1509_51224} {RNA1310_3855.1} {RNA815_19895}
5. MligTC455_10521 17 0.36 Mlig455_014391

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_014391 {REF} {Length: 1313} {RNA1509_36146} {RNA1310_32605} {RNA815_14202}
6. MligTC455_13699 17 0.35 Mlig455_020385

Neo: -

Age: -

0.99 - - - - 0.990 - Mlig455_020385 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5641) [PF18701.3, score=57.1]} {RNA1509_48193} {RNA1310_61001} {RNA815_22164}
7. MligTC455_00043 14 0.29 Mlig455_053584

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_053584 {REF} {Length: 359} {NoTransDecoderORF}
8. MligTC455_04888 8 0.17 Mlig455_015181

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.376

ENPP6 0.974 - - - - 0.974 - Mlig455_015181 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=125.7]} {Human: ENSG00000164303, ENPP6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=167, Expect=9e-46]} {Mouse: ENSMUSG00000038173, Enpp6, ectonucleotide pyrophosphatase/phosphodiesterase 6, [Score=167, Expect=4e-46]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [Score=80.1, Expect=1e-15]} {Smed: dd_Smed_v6_1269_0_1, dd_Smed_v6_1269_0_1, [RH, Score=218, Expect=4e-65]} {RNA1509_53042} {RNA1310_15252, RNA1509_53042} {RNA1509_53042, RNA815_10561}
9. MligTC455_08435 9 0.18 Mlig455_018007

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_018007 {REF} {Length: 1911} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_105231} {RNA815_60501}
10. MligTC455_35022 166 3.45 Mlig455_007549

Neo: -

Age: logFC(26M/2M)=1.108

NDUFA2 0.972 - - 0.972 - - - Mlig455_007549 {REF} {Length: 645} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain [PF05047.18, score=49.8]} {Human: ENSG00000131495, NDUFA2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=97.1, Expect=2e-27]} {Mouse: ENSMUSG00000014294, Ndufa2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=94.7, Expect=1e-26]} {Dmel: FBgn0040705, ND-B8, NADH dehydrogenase (ubiquinone) B8 subunit, [RH, Score=68.6, Expect=2e-16]} {Celegans: WBGene00013406, Y63D3A.7, [RH, Score=88.2, Expect=2e-24]} {Smed: dd_Smed_v6_1815_0_1, dd_Smed_v6_1815_0_1, [RH, Score=87.4, Expect=3e-24]} {RNA1509_16031} {RNA1310_56837.1} {RNA815_28457}
11. MligTC455_07243 5 0.1 Mlig455_059940

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_059940 {REF} {Length: 716} {Pfam: Poly(hydroxyalcanoate) granule associated protein (phasin) [PF05597.13, score=19.7]; Dynamin GTPase effector domain [PF02212.20, score=19.3]} {RNA1310_9825} {RNA815_13518}
12. MligTC455_30654 13 0.26 Mlig455_022389, Mlig455_022477, Mlig455_044106

Neo: -

Age: -

0.957 - - - - - 0.957

Mlig455_022389 {REF} {Length: 347} {NoTransDecoderORF} {RNA1509_4102} {RNA1310_128295} {RNA815_47080}

Mlig455_022477 {REF} {Length: 3596} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=8e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}

Mlig455_044106 {REF} {Length: 2240} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=1e-12]} {RNA1509_40708, RNA1509_47056} {RNA1310_5710.1, RNA1509_40708} {RNA1509_40708, RNA815_15609}
13. MligTC455_45730 87 1.81 Mlig455_020296

Neo: -

Age: Down-Up-Up

Region-enriched R2: 8.589/0.00002

SSUH2 0.956 - - 0.956 - - - Mlig455_020296 {REF} {Length: 1680} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [Score=197, Expect=3e-59]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [Score=155, Expect=9e-44]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=127, Expect=5e-33]} {RNA1310_19609.2} {RNA815_22113.1}
14. MligTC455_28537 11 0.23 Mlig455_046145

Neo: -

Age: Up-Down-Down

ANK2 0.955 - - - - 0.955 - Mlig455_046145 {REF} {Length: 6079} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=428.5]; Ankyrin repeat [PF00023.32, score=384.3]; Ankyrin repeats (many copies) [PF13637.8, score=369.2]; Ankyrin repeats (many copies) [PF13857.8, score=358.1]; Ankyrin repeat [PF13606.8, score=314.6]; UPA domain [PF17809.3, score=157.1]; ZU5 domain [PF00791.22, score=109.6]; Death domain [PF00531.24, score=50.0]} {Human: ENSG00000145362, ANK2, ankyrin 2, [RH, Score=1475, Expect=0.0]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [RH, Score=1495, Expect=0.0]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [RH, Score=1456, Expect=0.0]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [RH, Score=1552, Expect=0.0]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [RH, Score=971, Expect=0.0]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [RH, Score=1754, Expect=0.0]} {RNA1509_2291} {RNA1310_4889.2, RNA1509_2291} {RNA1509_2291, RNA815_191.2}
15. MligTC455_17137 35 0.74 Mlig455_057097

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.464

0.954 - - - - 0.954 - Mlig455_057097 {REF} {Length: 2458} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=47.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=32.2]} {Mouse: ENSMUSG00000058400, Qrfpr, pyroglutamylated RFamide peptide receptor, [Score=53.1, Expect=3e-07]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=62.4, Expect=3e-10]} {Celegans: WBGene00020586, frpr-18, FLP-2 receptor; FMRFamide Peptide Receptor family, [Score=63.9, Expect=7e-11]} {Smed: dd_Smed_v6_12500_0_1, dd_Smed_v6_12500_0_1, [Score=236, Expect=2e-73]} {RNA1310_39525} {RNA815_20959}
16. MligTC455_41781 95 1.98 Mlig455_019136

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_019136 {REF} {Length: 2805} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.6]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [RH, Score=213, Expect=5e-65]} {RNA1310_68226} {RNA815_47910}
17. MligTC455_08107 12 0.25 Mlig455_025967

Neo: Int S/G2/M

Age: -

SETMAR 0.952 - - - - 0.952 - Mlig455_025967 {REF} {Length: 648} {Pfam: DDE superfamily endonuclease [PF13358.8, score=27.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [RH, Score=78.6, Expect=7e-20]} {RNA1509_47328} {RNA1310_11820} {RNA815_59673}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA