M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13213

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13213 1086 22.62 Mlig455_013296, Mlig455_050506

Neo: Int S/G2/M

Age: -

 SKIV2L

Mlig455_013296 {REF} {Length: 4104} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.7]; DEAD/DEAH box helicase [PF00270.31, score=70.1]; Type III restriction enzyme, res subunit [PF04851.17, score=36.6]; rRNA-processing arch domain [PF13234.8, score=35.8]; Helicase conserved C-terminal domain [PF00271.33, score=24.6]} {Human: ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=786, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=703, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_6154} {RNA1310_1969.1} {RNA815_733}

Mlig455_050506 {REF} {Length: 4284} {TRANSSPLICED} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.2]; DEAD/DEAH box helicase [PF00270.31, score=69.8]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; rRNA-processing arch domain [PF13234.8, score=35.4]; Helicase conserved C-terminal domain [PF00271.33, score=24.2]} {Human: ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=789, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=722, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=1e-180]} {RNA1509_17804, RNA1509_6154} {RNA1310_1969.1, RNA1509_17804, RNA1509_6154} {RNA1509_17804, RNA1509_6154, RNA815_733}

Cumulative graph for MligTC455_13213

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.048 4.768 0.29267 0.94460
RegionR2 0.223 4.768 0.66775 0.99695
RegionR3 0.435 4.768 0.30755 0.84693
RegionR4 0.642 4.768 0.16741 0.42929
RegionR5 -0.028 4.768 0.94434 1.00000
RegionR6 -0.362 4.768 0.40317 0.97402
RegionR7 -1.128 4.768 0.05188 0.43838
RegionR8 1.266 4.768 0.01548 0.24253

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.6 4.768 0.19360 0.93161
RegenerationR2 -0.223 4.768 0.64317 0.93279
RegenerationR3 -0.063 4.768 0.90089 1.00000
RegenerationR4 -0.583 4.768 0.24958 0.69799
RegenerationR5 0.183 4.768 0.71036 0.95556
RegenerationR6 0.927 4.768 0.06984 0.33114
RegenerationBL 0.053 4.768 0.92756 1.00000
RegenerationTP -0.466 4.768 0.44596 0.86476


Genes with expression patterns similar to MligTC455_13213

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13213 1086 22.62 Mlig455_013296, Mlig455_050506

Neo: Int S/G2/M

Age: -

 SKIV2L 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_013296 {REF} {Length: 4104} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.7]; DEAD/DEAH box helicase [PF00270.31, score=70.1]; Type III restriction enzyme, res subunit [PF04851.17, score=36.6]; rRNA-processing arch domain [PF13234.8, score=35.8]; Helicase conserved C-terminal domain [PF00271.33, score=24.6]} {Human: ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=786, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=703, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_6154} {RNA1310_1969.1} {RNA815_733}

Mlig455_050506 {REF} {Length: 4284} {TRANSSPLICED} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.2]; DEAD/DEAH box helicase [PF00270.31, score=69.8]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; rRNA-processing arch domain [PF13234.8, score=35.4]; Helicase conserved C-terminal domain [PF00271.33, score=24.2]} {Human: ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=789, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=722, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=1e-180]} {RNA1509_17804, RNA1509_6154} {RNA1310_1969.1, RNA1509_17804, RNA1509_6154} {RNA1509_17804, RNA1509_6154, RNA815_733}
2. MligTC455_53536 6320 131.67 Mlig455_046722, Mlig455_046837, Mlig455_046844

Neo: -

Age: logFC(26M/2M)=0.195

Regeneration-upregulated BL: 2.033

Regeneration-enriched BL: 2.033

 HNRNPH1, HNRNPH2 1.794 - 0.828 - 0.966 - -

Mlig455_046722 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=111.4]} {Human: ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=8e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=5e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=132, Expect=7e-33]} {Celegans: WBGene00006367, sym-2, RNA-binding protein sym-2, [Score=112, Expect=3e-27]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405}

Mlig455_046837 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.3]} {Human: ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=226, Expect=4e-68]; ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=6e-68]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=4e-67]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=230, Expect=1e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=226, Expect=4e-68]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=223, Expect=3e-67]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=3e-47]} {RNA1509_3891} {RNA1310_9870.1, RNA1509_3891} {RNA1509_3891, RNA815_3405}

Mlig455_046844 {REF} {Length: 2331} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=110.2]} {Human: ENSG00000284254, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000126945, HNRNPH2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=224, Expect=3e-67]; ENSG00000169045, HNRNPH1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=1e-67]; ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [RH, Score=219, Expect=7e-66]} {Mouse: ENSMUSG00000045427, Hnrnph2, heterogeneous nuclear ribonucleoprotein H2, [RH, Score=228, Expect=7e-69]; ENSMUSG00000007850, Hnrnph1, heterogeneous nuclear ribonucleoprotein H1, [RH, Score=224, Expect=2e-67]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [RH, Score=220, Expect=4e-66]} {Dmel: FBgn0259139, glo, glorund, [RH, Score=133, Expect=4e-33]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [RH, Score=129, Expect=6e-32]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [RH, Score=167, Expect=2e-47]} {RNA1509_3891} {RNA1310_9870.1} {RNA815_3405}
3. MligTC455_51778 1918 39.95 Mlig455_053798, Mlig455_068542

Neo: Neoblast

Age: Down-Up-Up

Region-specific R5: 1.565

Region-enriched R5: 1.286/0.00000

 HDDC2 1.731 0.748 - - - - 0.983

Mlig455_053798 {REF} {Length: 1229} {TRANSSPLICED} {Pfam: HD domain [PF13023.8, score=105.7]; HD containing hydrolase-like enzyme [PF12917.9, score=18.6]} {Human: ENSG00000111906, HDDC2, HD domain containing 2, [RH, Score=81.6, Expect=1e-17]} {Mouse: ENSMUSG00000000295, Hddc2, HD domain containing 2, [RH, Score=82.8, Expect=3e-18]} {Dmel: FBgn0031836, CG11050, [RH, Score=118, Expect=9e-30]} {Celegans: WBGene00018481, F45F2.9, [RH, Score=100, Expect=8e-25]} {Smed: dd_Smed_v6_9809_0_1, dd_Smed_v6_9809_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_31187, RNA1509_8772} {RNA1310_23174.1, RNA1509_31187, RNA1509_8772} {RNA1509_31187, RNA1509_8772, RNA815_11847}

Mlig455_068542 {REF} {Length: 1228} {TRANSSPLICED} {Pfam: HD domain [PF13023.8, score=105.8]; HD containing hydrolase-like enzyme [PF12917.9, score=18.6]} {Human: ENSG00000111906, HDDC2, HD domain containing 2, [RH, Score=82.0, Expect=1e-17]} {Mouse: ENSMUSG00000000295, Hddc2, HD domain containing 2, [RH, Score=82.8, Expect=3e-18]} {Dmel: FBgn0031836, CG11050, [RH, Score=118, Expect=1e-29]} {Celegans: WBGene00018481, F45F2.9, [RH, Score=100, Expect=6e-25]} {Smed: dd_Smed_v6_9809_0_1, dd_Smed_v6_9809_0_1, [RH, Score=117, Expect=3e-31]} {RNA1509_31187} {RNA1310_23174.1} {RNA815_11847}
4. MligTC455_19649 816 16.99 Mlig455_011819

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.728/0.00031
Region-enriched R5: 1.702/0.00000

 MRPL13 1.698 - - - 0.724 - 0.974 Mlig455_011819 {REF} {Length: 825} {TRANSSPLICED} {Pfam: Ribosomal protein L13 [PF00572.20, score=67.8]} {Human: ENSG00000172172, MRPL13, mitochondrial ribosomal protein L13, [RH, Score=123, Expect=4e-35]} {Mouse: ENSMUSG00000022370, Mrpl13, mitochondrial ribosomal protein L13, [RH, Score=115, Expect=2e-32]} {Dmel: FBgn0032720, mRpL13, mitochondrial ribosomal protein L13, [RH, Score=113, Expect=1e-31]} {Celegans: WBGene00008769, mrpl-13, Mitochondrial Ribosomal Protein, Large, [RH, Score=81.6, Expect=3e-19]} {Smed: dd_Smed_v6_5844_0_1, dd_Smed_v6_5844_0_1, [RH, Score=178, Expect=4e-57]} {RNA1509_19686} {RNA1310_45537, RNA1509_19686} {RNA1509_19686, RNA815_22378.2}
5. MligTC455_48745 566 11.79 Mlig455_033681, Mlig455_050139

Neo: -

Age: logFC(26M/2M)=0.794

Region-enriched R4: 2.158/0.03550

 PPP1R10 1.685 - - - 0.960 0.725 -

Mlig455_033681 {REF} {Length: 3326} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173, RNA1509_7573} {RNA1509_7573, RNA815_6778}

Mlig455_050139 {REF} {Length: 3325} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173} {RNA815_6778}
6. MligTC455_48251 381 7.94 Mlig455_058416

Neo: -

Age: -

 COA7 0.971 - - - 0.971 - - Mlig455_058416 {REF} {Length: 1445} {TRANSSPLICED} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [RH, Score=63.2, Expect=3e-11]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [RH, Score=66.6, Expect=1e-12]} {Celegans: WBGene00013925, ZK20.4, Cytochrome c oxidase assembly factor 7 homolog, [RH, Score=67.0, Expect=6e-13]} {Smed: dd_Smed_v6_7923_0_1, dd_Smed_v6_7923_0_1, [RH, Score=74.3, Expect=8e-16]} {RNA1509_13019, RNA1509_35982, RNA1509_48288} {RNA1310_27134, RNA1509_35982, RNA1509_48288} {RNA1509_35982, RNA1509_48288, RNA815_18869}
7. MligTC455_30372 989 20.61 Mlig455_056814

Neo: -

Age: Down-Up-Up

 PPHLN1 0.963 - - - 0.963 - - Mlig455_056814 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [RH, Score=108, Expect=2e-25]} {RNA1509_34398, RNA1509_38819} {RNA1310_37435, RNA1509_38819} {RNA1509_38819, RNA815_18313}
8. MligTC455_38154 1113 23.18 Mlig455_057302

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_057302 {REF} {Length: 528} {TRANSSPLICED} {Pfam: TOM7 family [PF08038.14, score=36.1]} {Dmel: FBgn0033357, Tom7, Translocase of outer membrane 7, [RH, Score=55.5, Expect=3e-12]} {RNA1509_21335} {RNA1310_40020} {RNA815_32819.2}
9. MligTC455_13065 148 3.08 Mlig455_043686, Mlig455_043753, Mlig455_047472

Neo: -

Age: -

 RGS12, RGS3 0.961 - - 0.961 - - -

Mlig455_043686 {REF} {Length: 3598} {Pfam: PDZ domain [PF00595.26, score=38.7]; C2 domain [PF00168.32, score=38.5]; PDZ domain [PF17820.3, score=36.6]; PDZ domain [PF13180.8, score=23.2]} {Human: ENSG00000138835, RGS3, regulator of G protein signaling 3, [RH, Score=86.3, Expect=4e-17]} {Mouse: ENSMUSG00000059810, Rgs3, regulator of G-protein signaling 3, [RH, Score=85.1, Expect=6e-17]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=62.8, Expect=7e-10]} {Smed: dd_Smed_v6_17732_0_1, dd_Smed_v6_17732_0_1, [RH, Score=105, Expect=9e-24]} {RNA1310_17293.2}

Mlig455_043753 {REF} {Length: 1508} {Pfam: PDZ domain [PF00595.26, score=39.7]; PDZ domain [PF17820.3, score=37.4]; PDZ domain [PF13180.8, score=24.1]} {Human: ENSG00000159788, RGS12, regulator of G protein signaling 12, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000029101, Rgs12, regulator of G-protein signaling 12, [Score=64.7, Expect=7e-11]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=62.0, Expect=4e-10]} {Smed: dd_Smed_v6_17732_0_1, dd_Smed_v6_17732_0_1, [Score=73.9, Expect=3e-14]} {RNA1310_80665}

Mlig455_047472 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=38.8]; PDZ domain [PF00595.26, score=38.8]; PDZ domain [PF17820.3, score=36.6]; PDZ domain [PF13180.8, score=23.2]} {Human: ENSG00000138835, RGS3, regulator of G protein signaling 3, [RH, Score=84.7, Expect=1e-16]} {Mouse: ENSMUSG00000059810, Rgs3, regulator of G-protein signaling 3, [RH, Score=85.5, Expect=4e-17]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=62.4, Expect=9e-10]} {Smed: dd_Smed_v6_17732_0_1, dd_Smed_v6_17732_0_1, [RH, Score=103, Expect=5e-23]} {RNA1310_17293.2}
10. MligTC455_35244 2517 52.43 Mlig455_053709

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 1.339

Regeneration-enriched BL: 1.339

 PSMD1 0.96 - - - 0.960 - - Mlig455_053709 {REF} {Length: 4047} {Pfam: 26S proteasome regulatory subunit RPN2 C-terminal domain [PF18004.3, score=151.1]; Proteasome/cyclosome repeat [PF01851.24, score=116.8]; HEAT repeats [PF13646.8, score=67.8]; HEAT repeat [PF02985.24, score=24.8]} {Human: ENSG00000173692, PSMD1, proteasome 26S subunit, non-ATPase 1, [RH, Score=1039, Expect=0.0]} {Mouse: ENSMUSG00000026229, Psmd1, proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, [RH, Score=1039, Expect=0.0]} {Dmel: FBgn0028692, Rpn2, Regulatory particle non-ATPase 2, [RH, Score=1016, Expect=0.0]} {Celegans: WBGene00004459, rpn-2, 26S proteasome non-ATPase regulatory subunit 1, [RH, Score=461, Expect=9e-146]} {Smed: dd_Smed_v6_1149_0_1, dd_Smed_v6_1149_0_1, [RH, Score=1048, Expect=0.0]} {RNA1509_727} {RNA1310_2240.1, RNA1509_727} {RNA1509_727, RNA815_171.1}
11. MligTC455_47631 2681 55.86 Mlig455_029041

Neo: -

Age: -

 BCO1 0.96 - - - - - 0.960 Mlig455_029041 {REF} {Length: 2137} {Pfam: Retinal pigment epithelial membrane protein [PF03055.17, score=362.7]} {Human: ENSG00000135697, BCO1, beta-carotene oxygenase 1, [RH, Score=339, Expect=4e-110]; ENSG00000116745, RPE65, RPE65, retinoid isomerohydrolase, [RH, Score=338, Expect=1e-109]} {Mouse: ENSMUSG00000031845, Bco1, beta-carotene oxygenase 1, [RH, Score=335, Expect=4e-108]; ENSMUSG00000028174, Rpe65, retinal pigment epithelium 65, [RH, Score=333, Expect=9e-108]} {Dmel: FBgn0002937, ninaB, neither inactivation nor afterpotential B, [RH, Score=263, Expect=2e-80]} {Celegans: WBGene00012914, bcmo-1, Beta-Carotene 15,15'-MonoOxygenase, [RH, Score=252, Expect=5e-77]} {Smed: dd_Smed_v6_4523_0_1, dd_Smed_v6_4523_0_1, [RH, Score=310, Expect=2e-99]} {RNA1509_13366, RNA1509_19231, RNA1509_32100, RNA1509_34562, RNA1509_39029, RNA1509_46465, RNA1509_51177, RNA1509_54411} {RNA1310_9752.2, RNA1509_13366, RNA1509_19231, RNA1509_32100, RNA1509_34562, RNA1509_39029, RNA1509_46465, RNA1509_51177, RNA1509_54411} {RNA1509_13366, RNA1509_19231, RNA1509_32100, RNA1509_34562, RNA1509_39029, RNA1509_46465, RNA1509_51177, RNA1509_54411, RNA815_3938}
12. MligTC455_30371 1006 20.96 Mlig455_056792

Neo: Int S/G2/M

Age: -

 PPHLN1 0.959 - - - 0.959 - - Mlig455_056792 {REF} {Length: 4639} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.4]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [Score=112, Expect=7e-27]} {RNA1509_16220, RNA1509_16318, RNA1509_17626} {RNA1310_18930, RNA1509_16220, RNA1509_17626} {RNA1509_16220, RNA1509_17626, RNA815_5252.1}
13. MligTC455_38153 1123 23.39 Mlig455_037546

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_037546 {REF} {Length: 529} {TRANSSPLICED} {Pfam: TOM7 family [PF08038.14, score=36.1]} {Dmel: FBgn0033357, Tom7, Translocase of outer membrane 7, [RH, Score=55.5, Expect=3e-12]} {RNA1509_21335} {RNA1310_40020, RNA1509_21335} {RNA1509_21335, RNA815_32819.2}
14. MligTC455_40273 3609 75.19 Mlig455_019364

Neo: -

Age: logFC(26M/2M)=0.159

 ACADVL 0.958 - - - - - 0.958 Mlig455_019364 {REF} {Length: 2348} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=135.5]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=81.9]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=79.1]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=42.9]} {Human: ENSG00000072778, ACADVL, acyl-CoA dehydrogenase very long chain, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000018574, Acadvl, acyl-Coenzyme A dehydrogenase, very long chain, [RH, Score=672, Expect=0.0]} {Dmel: FBgn0034432, CG7461, [RH, Score=635, Expect=0.0]} {Celegans: WBGene00017125, acdh-12, Acyl CoA DeHydrogenase, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_2663_0_1, dd_Smed_v6_2663_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_1423} {RNA1310_8126.1} {RNA815_2564.1}
15. MligTC455_18751 300 6.26 Mlig455_011845

Neo: Irradiation

Age: logFC(26M/2M)=0.450

 0.957 - - - 0.957 - - Mlig455_011845 {REF} {Length: 1955} {RNA1509_21437} {RNA1310_70292.3} {RNA815_45917.2}
16. MligTC455_46901 537 11.19 Mlig455_051008

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R4: 1.912/0.00523
Region-enriched R5: 1.329/0.01014

 0.954 - - - - - 0.954 Mlig455_051008 {REF} {Length: 622} {TRANSSPLICED} {Pfam: rRNA processing [PF08524.13, score=38.9]} {Dmel: FBgn0039764, CG15535, [Score=43.1, Expect=1e-05]} {RNA1509_32573} {RNA1310_29171.3, RNA1509_32573} {RNA1509_32573, RNA815_30697}
17. MligTC455_04257 1951 40.65 Mlig455_051547

Neo: -

Age: logFC(26M/2M)=0.395

 0.953 - - - - - 0.953 Mlig455_051547 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1295) [PF06966.14, score=155.4]; 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=20.9]} {Dmel: FBgn0035914, CG6282, [Score=125, Expect=4e-34]} {Smed: dd_Smed_v6_14327_0_1, dd_Smed_v6_14327_0_1, [Score=129, Expect=1e-35]} {RNA1509_8618} {RNA1310_22044, RNA1509_8618} {RNA1509_8618, RNA815_9497.1}
18. MligTC455_40143 727 15.14 Mlig455_034436

Neo: Irradiation

Age: -

 0.953 - - - 0.953 - - Mlig455_034436 {REF} {Length: 3145} {TRANSSPLICED} {Pfam: Proline-rich protein [PF15240.8, score=20.1]} {RNA1509_43083} {RNA1310_21674} {RNA815_7514}
19. MligTC455_52846 289 6.03 Mlig455_043189

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 2.322

Regeneration-enriched BL: 2.322

 PHF12 0.953 - - - 0.953 - - Mlig455_043189 {REF} {Length: 2501} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=58.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=94.7, Expect=8e-20]} {Dmel: FBgn0029861, CG3815, [RH, Score=106, Expect=1e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [RH, Score=79.0, Expect=5e-15]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [RH, Score=148, Expect=2e-37]} {RNA1509_54500} {RNA1310_6431} {RNA815_5155}
20. MligTC455_26457 836 17.43 Mlig455_001958

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.330

Region-enriched R5: 1.295/0.00399

 0.951 - - - 0.951 - - Mlig455_001958 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Regulatory factor X-associated C-terminal binding domain [PF15289.8, score=19.6]} {RNA1509_43649, RNA1509_50433} {RNA1310_19279, RNA1509_43649, RNA1509_50433} {RNA1509_43649, RNA1509_50433, RNA815_22593}
21. MligTC455_37889 489 10.18 Mlig455_027423

Neo: -

Age: -

Region-enriched R4: 2.078/0.03165

 CUL4A 0.95 - - - 0.950 - - Mlig455_027423 {REF} {Length: 3633} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=625.5]; Cullin protein neddylation domain [PF10557.11, score=82.8]} {Human: ENSG00000139842, CUL4A, cullin 4A, [RH, Score=776, Expect=0.0]; ENSG00000158290, CUL4B, cullin 4B, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000031095, Cul4b, cullin 4B, [RH, Score=776, Expect=0.0]; ENSMUSG00000031446, Cul4a, cullin 4A, [RH, Score=762, Expect=0.0]} {Dmel: FBgn0033260, Cul4, Cullin 4, [RH, Score=762, Expect=0.0]} {Celegans: WBGene00000838, cul-3, Cullin-3, [Score=386, Expect=8e-123]} {Smed: dd_Smed_v6_3730_1_1, dd_Smed_v6_3730_1_1, [RH, Score=503, Expect=3e-168]} {RNA1509_39933, RNA1509_48205, RNA1509_9681} {RNA1310_8801, RNA1509_39933, RNA1509_48205} {RNA1509_39933, RNA1509_48205, RNA815_2851}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA