Data search


search
Exact
Search

Results for MligTC455_30371

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30371 1006 20.96 Mlig455_056792

Neo: Int S/G2/M

Age: -

PPHLN1 Mlig455_056792 {REF} {Length: 4639} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.4]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [Score=112, Expect=7e-27]} {RNA1509_16220, RNA1509_16318, RNA1509_17626} {RNA1310_18930, RNA1509_16220, RNA1509_17626} {RNA1509_16220, RNA1509_17626, RNA815_5252.1}

Cumulative graph for MligTC455_30371

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.392 4.667 0.62470 1.00000
RegionR2 -0.234 4.667 0.52745 0.89961
RegionR3 -0.311 4.667 0.29835 0.84102
RegionR4 0.089 4.667 0.77522 1.00000
RegionR5 0.754 4.667 0.00162 0.01485
RegionR6 0.132 4.667 0.65343 1.00000
RegionR7 0.592 4.667 0.09906 0.60194
RegionR8 -0.631 4.667 0.24815 0.86684

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.395 4.667 0.04431 0.67871
RegenerationR2 0.295 4.667 0.33424 0.77038
RegenerationR3 0.511 4.667 0.11990 0.53803
RegenerationR4 0.134 4.667 0.66956 0.94223
RegenerationR5 -0.175 4.667 0.52156 0.87042
RegenerationR6 0.622 4.667 0.04811 0.27443
RegenerationBL 0.841 4.667 0.02511 0.17441
RegenerationTP -0.065 4.667 0.89121 1.00000


Genes with expression patterns similar to MligTC455_30371

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30371 1006 20.96 Mlig455_056792

Neo: Int S/G2/M

Age: -

PPHLN1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056792 {REF} {Length: 4639} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.4]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [Score=112, Expect=7e-27]} {RNA1509_16220, RNA1509_16318, RNA1509_17626} {RNA1310_18930, RNA1509_16220, RNA1509_17626} {RNA1509_16220, RNA1509_17626, RNA815_5252.1}
2. MligTC455_30372 989 20.61 Mlig455_056814

Neo: -

Age: Down-Up-Up

PPHLN1 5.951 1.000 0.998 0.993 0.999 0.999 0.962 Mlig455_056814 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.5]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=73.9, Expect=6e-14]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [RH, Score=108, Expect=2e-25]} {RNA1509_34398, RNA1509_38819} {RNA1310_37435, RNA1509_38819} {RNA1509_38819, RNA815_18313}
3. MligTC455_32550 924 19.24 Mlig455_019608

Neo: -

Age: Down-Down-Up

KAT8 2.67 - - - 0.890 0.830 0.950 Mlig455_019608 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=270.3]} {Human: ENSG00000103510, KAT8, lysine acetyltransferase 8, [Score=299, Expect=2e-99]} {Mouse: ENSMUSG00000030801, Kat8, K(lysine) acetyltransferase 8, [Score=298, Expect=2e-99]} {Dmel: FBgn0014340, mof, males absent on the first, [Score=281, Expect=5e-89]} {Celegans: WBGene00010537, mys-2, Histone acetyltransferase, [Score=236, Expect=7e-75]} {Smed: dd_Smed_v6_10027_0_1, dd_Smed_v6_10027_0_1, [Score=288, Expect=3e-96]} {RNA1509_14301} {RNA1310_7249.1} {RNA815_4204.1}
4. MligTC455_54314 1737 36.2 Mlig455_031145

Neo: Irradiation

Age: logFC(26M/2M)=0.240

Region-enriched R5: 1.323/0.00010

CEP95 2.539 0.768 - - 0.818 - 0.953 Mlig455_031145 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5745) [PF19016.2, score=71.0]} {Human: ENSG00000258890, CEP95, centrosomal protein 95, [Score=82.0, Expect=5e-16]} {Mouse: ENSMUSG00000018372, Cep95, centrosomal protein 95, [Score=79.3, Expect=2e-15]} {Smed: dd_Smed_v6_8515_0_1, dd_Smed_v6_8515_0_1, [Score=73.9, Expect=5e-14]} {RNA1509_4062, RNA1509_51472} {RNA1310_13760, RNA1509_4062, RNA1509_51472} {RNA1509_4062, RNA1509_51472, RNA815_19737}
5. MligTC455_54315 1719 35.82 Mlig455_031154

Neo: Irradiation

Age: -

Region-enriched R5: 1.397/0.00013

CEP95 2.504 0.761 - - 0.784 - 0.959 Mlig455_031154 {REF} {Length: 1994} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5745) [PF19016.2, score=70.0]} {Human: ENSG00000258890, CEP95, centrosomal protein 95, [Score=85.1, Expect=5e-17]} {Mouse: ENSMUSG00000018372, Cep95, centrosomal protein 95, [Score=83.6, Expect=9e-17]} {Smed: dd_Smed_v6_8515_0_1, dd_Smed_v6_8515_0_1, [Score=76.3, Expect=1e-14]} {RNA1509_4062} {RNA1310_13760} {RNA815_19737}
6. MligTC455_15818 562 11.71 Mlig455_064529

Neo: Neoblast, stringent

Age: Up-Down-Up

Regeneration-upregulated BL: 3.584

Regeneration-enriched BL: 3.584

NCAPD2 1.843 0.956 - - - - 0.887 Mlig455_064529 {REF} {Length: 5403} {TRANSSPLICED} {Pfam: non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=158.1]; non-SMC mitotic condensation complex subunit 1, N-term [PF12922.9, score=80.5]; Adaptin N terminal region [PF01602.22, score=19.4]} {Human: ENSG00000010292, NCAPD2, non-SMC condensin I complex subunit D2, [RH, Score=609, Expect=0.0]} {Mouse: ENSMUSG00000038252, Ncapd2, non-SMC condensin I complex, subunit D2, [RH, Score=596, Expect=0.0]} {Dmel: FBgn0039680, Cap-D2, CAP-D2 condensin subunit, [RH, Score=373, Expect=2e-107]} {Celegans: WBGene00001087, dpy-28, Condensin complex subunit 1, [RH, Score=104, Expect=3e-22]} {Smed: dd_Smed_v6_7047_0_1, dd_Smed_v6_7047_0_1, [RH, Score=461, Expect=3e-139]} {RNA1509_10796, RNA1509_36344} {RNA1310_1807.2, RNA1509_10796, RNA1509_36344} {RNA1509_10796, RNA1509_36344, RNA815_8816}
7. MligTC455_50593 1562 32.54 Mlig455_016015, Mlig455_059733

Neo: Neoblast, stringent

Age: -

TK2 1.75 - - - 0.790 - 0.960

Mlig455_016015 {REF} {Length: 1538} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=57.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=65.9, Expect=3e-13]} {Mouse: ENSMUSG00000014554, Dguok, deoxyguanosine kinase, [Score=62.0, Expect=4e-12]; ENSMUSG00000029366, Dck, deoxycytidine kinase, [Score=59.7, Expect=3e-11]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=70.9, Expect=1e-15]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849}

Mlig455_059733 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=167.9]; AAA domain [PF13238.8, score=31.5]; AAA domain [PF13671.8, score=24.2]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=166, Expect=1e-49]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [Score=162, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=167, Expect=3e-51]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849}
8. MligTC455_23235 6858 142.88 Mlig455_007211

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.137/0.00000

TMEM258 1.712 - - 0.745 - - 0.967 Mlig455_007211 {REF} {Length: 3602} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=99.4]; Family of unknown function (DUF6512) [PF20122.1, score=23.2]; LydA holin phage, holin superfamily III [PF16083.7, score=20.7]} {Human: ENSG00000134825, TMEM258, transmembrane protein 258, [RH, Score=131, Expect=1e-41]} {Mouse: ENSMUSG00000036372, Tmem258, transmembrane protein 258, [RH, Score=131, Expect=9e-42]} {Dmel: FBgn0036667, CG9669, [RH, Score=97.1, Expect=3e-28]} {Celegans: WBGene00021960, Y57E12AM.1, Transmembrane protein 258 homolog, [RH, Score=77.8, Expect=1e-20]} {Smed: dd_Smed_v6_1016_0_1, dd_Smed_v6_1016_0_1, [RH, Score=134, Expect=6e-43]} {RNA1509_5135} {RNA1310_34300, RNA1509_5135} {RNA1509_5135, RNA815_23193}
9. MligTC455_25212 251 5.23 Mlig455_049236

Neo: -

Age: logFC(26M/2M)=0.733

TRIP4 1.687 - - - - 0.727 0.960 Mlig455_049236 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: ASCH domain [PF04266.16, score=64.7]; Putative zinc finger motif, C2HC5-type [PF06221.15, score=44.1]} {Human: ENSG00000103671, TRIP4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=1e-126]} {Mouse: ENSMUSG00000032386, Trip4, thyroid hormone receptor interactor 4, [RH, Score=382, Expect=2e-126]} {Dmel: FBgn0031115, CG11710, [RH, Score=350, Expect=5e-115]} {Celegans: WBGene00000208, asc-1, ASC-1; Activating Signal Cointegrator homolog, [RH, Score=142, Expect=3e-37]} {Smed: dd_Smed_v6_9211_0_1, dd_Smed_v6_9211_0_1, [RH, Score=332, Expect=2e-109]} {RNA1509_40837} {RNA1310_3130.1} {RNA815_4330}
10. MligTC455_47349 1450 30.22 Mlig455_010530, Mlig455_061804

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.675/0.00004
Region-enriched R4: 1.345/0.03938

DNMT3B 1.676 - - 0.716 - - 0.960

Mlig455_010530 {REF} {Length: 2248} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=1e-19]} {RNA1509_23149} {RNA1310_10697.1, RNA1509_23149} {RNA1509_23149, RNA815_14886}

Mlig455_061804 {REF} {Length: 2249} {TRANSSPLICED} {Pfam: Cysteine rich ADD domain in DNMT3 [PF17980.3, score=29.7]} {Human: ENSG00000088305, DNMT3B, DNA methyltransferase 3 beta, [Score=89.4, Expect=9e-18]} {Mouse: ENSMUSG00000027478, Dnmt3b, DNA methyltransferase 3B, [Score=97.1, Expect=2e-20]; ENSMUSG00000082079, Dnmt3c, DNA methyltransferase 3C, [Score=94.7, Expect=9e-20]} {RNA1509_23149} {RNA1310_10697.1} {RNA815_14886}
11. MligTC455_20351 1824 38 Mlig455_019951, Mlig455_020022

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.144/0.00068

DDX17 1.672 0.716 - - - - 0.956

Mlig455_019951 {REF} {Length: 2463} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=162.7]; Helicase conserved C-terminal domain [PF00271.33, score=107.8]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=523, Expect=3e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=2e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=1e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=515, Expect=5e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=504, Expect=3e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=462, Expect=3e-158]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=525, Expect=0.0]} {RNA1509_4339, RNA1509_46098} {RNA1310_12456.1, RNA1509_46098} {RNA1509_46098, RNA815_4698}

Mlig455_020022 {REF} {Length: 2509} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=163.3]; Helicase conserved C-terminal domain [PF00271.33, score=108.3]; Type III restriction enzyme, res subunit [PF04851.17, score=19.0]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=522, Expect=5e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=1e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=2e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=516, Expect=2e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=503, Expect=8e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=464, Expect=4e-159]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=527, Expect=0.0]} {RNA1509_4339} {RNA1310_12456.1} {RNA815_4698}
12. MligTC455_09959 2412 50.25 Mlig455_043894

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.095/0.00000

Regeneration-upregulated BL: 1.261

Regeneration-enriched BL: 1.261

POLDIP3 1.661 0.708 - - - - 0.953 Mlig455_043894 {REF} {Length: 1920} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=41.8]} {Human: ENSG00000100227, POLDIP3, DNA polymerase delta interacting protein 3, [RH, Score=93.2, Expect=1e-20]} {Mouse: ENSMUSG00000041815, Poldip3, polymerase (DNA-directed), delta interacting protein 3, [RH, Score=96.7, Expect=4e-22]} {Dmel: FBgn0030959, CG6961, [RH, Score=74.3, Expect=2e-14]} {Smed: dd_Smed_v6_6532_0_1, dd_Smed_v6_6532_0_1, [RH, Score=76.3, Expect=2e-15]} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1310_21831.1, RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713, RNA815_6046}
13. MligTC455_54281 4130 86.05 Mlig455_008061

Neo: -

Age: -

0.974 - - - - 0.974 - Mlig455_008061 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: Selenoprotein S (SelS) [PF06936.13, score=45.7]} {Smed: dd_Smed_v6_569_0_1, dd_Smed_v6_569_0_1, [RH, Score=48.1, Expect=2e-07]} {RNA1509_11010, RNA1509_11165, RNA1509_34337, RNA1509_35615, RNA1509_37809, RNA1509_42300} {RNA1310_21464, RNA1509_11010, RNA1509_11165, RNA1509_34337, RNA1509_35615, RNA1509_37809, RNA1509_42300} {RNA1509_11010, RNA1509_11165, RNA1509_34337, RNA1509_35615, RNA1509_37809, RNA1509_42300, RNA815_8980}
14. MligTC455_25693 520 10.83 Mlig455_022160

Neo: Int S/G2/M

Age: -

PBK 0.967 - - - - - 0.967 Mlig455_022160 {REF} {Length: 3556} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=108.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.0]; Kinase-like [PF14531.8, score=25.6]} {Human: ENSG00000168078, PBK, PDZ binding kinase, [RH, Score=151, Expect=1e-42]} {Mouse: ENSMUSG00000022033, Pbk, PDZ binding kinase, [RH, Score=145, Expect=1e-40]} {Dmel: FBgn0030864, CG8173, [RH, Score=155, Expect=1e-43]} {Celegans: WBGene00017033, nekl-4, Serine/threonine-protein kinase D1044.8, [Score=92.4, Expect=2e-20]} {Smed: dd_Smed_v6_4784_0_2, dd_Smed_v6_4784_0_2, [Score=84.7, Expect=5e-18]} {RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342} {RNA1310_28898, RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342} {RNA1509_20044, RNA1509_22560, RNA1509_24167, RNA1509_27342, RNA815_22190}
15. MligTC455_43832 1124 23.42 Mlig455_021852, Mlig455_021927, Mlig455_022019

Neo: Irradiation

Age: logFC(26M/2M)=0.255

Region-enriched R5: 1.315/0.00106

RCC1 0.966 - - - - - 0.966

Mlig455_021852 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=361, Expect=1e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=363, Expect=2e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=267, Expect=5e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=310, Expect=2e-97]} {RNA1509_16612, RNA1509_36762} {RNA1310_17834, RNA1509_36762} {RNA1509_36762, RNA815_21477}

Mlig455_021927 {REF} {Length: 3409} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=232.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=360, Expect=5e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=360, Expect=4e-119]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=268, Expect=3e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=309, Expect=3e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477}

Mlig455_022019 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.5]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.7]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=363, Expect=9e-120]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=365, Expect=1e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=271, Expect=3e-83]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=127, Expect=5e-31]} {Smed: dd_Smed_v6_4136_0_2, dd_Smed_v6_4136_0_2, [RH, Score=309, Expect=5e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477}
16. MligTC455_13213 1086 22.62 Mlig455_013296, Mlig455_050506

Neo: Int S/G2/M

Age: -

SKIV2L 0.959 - - - 0.959 - -

Mlig455_013296 {REF} {Length: 4104} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.7]; DEAD/DEAH box helicase [PF00270.31, score=70.1]; Type III restriction enzyme, res subunit [PF04851.17, score=36.6]; rRNA-processing arch domain [PF13234.8, score=35.8]; Helicase conserved C-terminal domain [PF00271.33, score=24.6]} {Human: ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=795, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=786, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=719, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=703, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_6154} {RNA1310_1969.1} {RNA815_733}

Mlig455_050506 {REF} {Length: 4284} {TRANSSPLICED} {Pfam: DSHCT (NUC185) domain [PF08148.14, score=146.2]; DEAD/DEAH box helicase [PF00270.31, score=69.8]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; rRNA-processing arch domain [PF13234.8, score=35.4]; Helicase conserved C-terminal domain [PF00271.33, score=24.2]} {Human: ENSG00000232616, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000204351, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000206353, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000223493, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000228896, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]; ENSG00000225737, SKIV2L, Ski2 like RNA helicase, [RH, Score=796, Expect=0.0]} {Mouse: ENSMUSG00000040356, Skiv2l, superkiller viralicidic activity 2-like (S. cerevisiae), [RH, Score=789, Expect=0.0]} {Dmel: FBgn0039117, tst, twister, [RH, Score=722, Expect=0.0]} {Celegans: WBGene00008502, skih-2, SKI (Yeast SuperKIller) Helicase homolog, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_9055_0_1, dd_Smed_v6_9055_0_1, [RH, Score=565, Expect=1e-180]} {RNA1509_17804, RNA1509_6154} {RNA1310_1969.1, RNA1509_17804, RNA1509_6154} {RNA1509_17804, RNA1509_6154, RNA815_733}
17. MligTC455_51589 1578 32.87 Mlig455_044221

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.249

Region-enriched R5: 1.168/0.00011

SNRPB 0.955 - - - - - 0.955 Mlig455_044221 {REF} {Length: 1532} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.0]} {Human: ENSG00000125835, SNRPB, small nuclear ribonucleoprotein polypeptides B and B1, [RH, Score=160, Expect=4e-49]; ENSG00000128739, SNRPN, small nuclear ribonucleoprotein polypeptide N, [RH, Score=157, Expect=6e-49]} {Mouse: ENSMUSG00000027404, Snrpb, small nuclear ribonucleoprotein B, [RH, Score=160, Expect=2e-49]; ENSMUSG00000102252, Snrpn, small nuclear ribonucleoprotein N, [RH, Score=157, Expect=4e-48]} {Dmel: FBgn0262601, SmB, Small ribonucleoprotein particle protein SmB, [RH, Score=149, Expect=2e-45]} {Celegans: WBGene00004915, snr-2, Probable small nuclear ribonucleoprotein-associated protein B, [RH, Score=125, Expect=8e-37]} {Smed: dd_Smed_v6_887_0_1, dd_Smed_v6_887_0_1, [RH, Score=151, Expect=1e-46]} {RNA1509_2645} {RNA1310_16830} {RNA815_8800}
18. MligTC455_34941 1300 27.08 Mlig455_050149

Neo: -

Age: logFC(26M/2M)=0.240

MIA2 0.953 - - - - 0.953 - Mlig455_050149 {REF} {Length: 7267} {TRANSSPLICED} {Human: ENSG00000150527, MIA2, MIA SH3 domain ER export factor 2, [RH, Score=67.0, Expect=3e-10]; ENSG00000285123, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000271321, CTAGE6, CTAGE family member 6, [RH, Score=65.9, Expect=6e-10]; ENSG00000285172, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000271079, CTAGE15, CTAGE family member 15, [RH, Score=65.5, Expect=7e-10]; ENSG00000236761, CTAGE9, CTAGE family member 9, [RH, Score=65.1, Expect=9e-10]} {Mouse: ENSMUSG00000056050, Mia3, melanoma inhibitory activity 3, [RH, Score=64.3, Expect=7e-10]; ENSMUSG00000021000, Mia2, melanoma inhibitory activity 2, [RH, Score=62.8, Expect=4e-09]} {Dmel: FBgn0031842, Tango1, Transport and Golgi organization 1, [RH, Score=82.4, Expect=3e-15]} {RNA1509_2081, RNA1509_43176} {RNA1310_854.2, RNA1509_43176} {RNA1509_43176, RNA815_1012.1}
19. MligTC455_49362 929 19.36 Mlig455_034948

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.608/0.00000
Region-enriched R4: 2.354/0.00003
Region-enriched R6: 2.038/0.00315

Regeneration-enriched TP: 4.706
Regeneration-enriched BL: 3.427

FGFR1OP 0.953 - - - - - 0.953 Mlig455_034948 {REF} {Length: 944} {Pfam: FOP N terminal dimerisation domain [PF09398.12, score=26.5]} {Human: ENSG00000213066, FGFR1OP, FGFR1 oncogene partner, [Score=81.6, Expect=4e-18]} {Mouse: ENSMUSG00000069135, Fgfr1op, Fgfr1 oncogene partner, [Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_5371_0_1, dd_Smed_v6_5371_0_1, [RH, Score=68.6, Expect=3e-14]} {RNA1509_35328} {RNA1310_39832.1} {RNA815_19196}
20. MligTC455_15894 262 5.45 Mlig455_061767

Neo: -

Age: logFC(26M/2M)=0.408

RABGGTB 0.952 - - - - - 0.952 Mlig455_061767 {REF} {Length: 1558} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=184.4]; Squalene-hopene cyclase N-terminal domain [PF13249.8, score=19.3]} {Human: ENSG00000137955, RABGGTB, Rab geranylgeranyltransferase subunit beta, [RH, Score=384, Expect=2e-133]} {Mouse: ENSMUSG00000038975, Rabggtb, Rab geranylgeranyl transferase, b subunit, [RH, Score=374, Expect=9e-130]} {Dmel: FBgn0028970, betaggt-II, beta subunit of type II geranylgeranyl transferase, [RH, Score=362, Expect=5e-125]} {Celegans: WBGene00015099, ggtb-1, Probable geranylgeranyl transferase type-2 subunit beta, [RH, Score=364, Expect=7e-126]} {Smed: dd_Smed_v6_3769_0_1, dd_Smed_v6_3769_0_1, [RH, Score=343, Expect=1e-117]} {RNA1509_42912, RNA1509_43053} {RNA1310_22063, RNA1509_42912, RNA1509_43053} {RNA1509_42912, RNA1509_43053, RNA815_29569}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA