Data search
Results for MligTC455_13229
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13229 | 225 | 4.68 | Mlig455_065103 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.030 Region-enriched R6: 3.013/0.02437 |
Mlig455_065103 {REF} {Length: 1740} {RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1310_24300.1, RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1509_26431, RNA1509_42284, RNA1509_53537, RNA815_10899.1} |
Cumulative graph for MligTC455_13229
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.544 | 2.924 | 0.60075 | 1.00000 | |
| RegionR2 | 0.62 | 2.924 | 0.47224 | 0.85777 | |
| RegionR3 | 2.78 | 2.924 | 0.00071 | 0.02282 | |
| RegionR4 | 1.697 | 2.924 | 0.09641 | 0.29986 | |
| RegionR5 | 1.741 | 2.924 | 0.03878 | 0.15600 | |
| RegionR6 | 3.013 | 2.924 | 0.00050 | 0.02437 | |
| RegionR7 | -5.195 | 2.924 | 0.99980 | 1.00000 | |
| RegionR8 | -5.2 | 2.924 | 0.99962 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.471 | 2.924 | 0.30765 | 1.00000 | |
| RegenerationR2 | 0.481 | 2.924 | 0.62212 | 0.92397 | |
| RegenerationR3 | -0.543 | 2.924 | 0.51120 | 0.86193 | |
| RegenerationR4 | 0.324 | 2.924 | 0.67855 | 0.94536 | |
| RegenerationR5 | 0.238 | 2.924 | 0.73476 | 0.96585 | |
| RegenerationR6 | -0.937 | 2.924 | 0.25312 | 0.60287 | |
| RegenerationBL | 2.414 | 2.924 | 0.26925 | 0.62829 | |
| RegenerationTP | 6.88 | 2.924 | 0.00084 | 0.04346 |
Genes with expression patterns similar to MligTC455_13229
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13229 | 225 | 4.68 | Mlig455_065103 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.030 Region-enriched R6: 3.013/0.02437 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065103 {REF} {Length: 1740} {RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1310_24300.1, RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1509_26431, RNA1509_42284, RNA1509_53537, RNA815_10899.1} | |
| 2. | MligTC455_28897 | 308 | 6.42 | Mlig455_030032 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.123 Region-enriched R3: 2.756/0.00353 |
URGCP | 1.767 | - | 0.805 | - | - | - | 0.962 | Mlig455_030032 {REF} {Length: 7627} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.6]; Dynamin family [PF00350.25, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.7]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=116, Expect=1e-25]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=515, Expect=5e-151]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=513, Expect=2e-150]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
| 3. | MligTC455_34385 | 560 | 11.67 | Mlig455_069293 | Neo: - Age: - |
1.726 | 0.756 | - | - | - | - | 0.970 | Mlig455_069293 {REF} {Length: 746} {NoTransDecoderORF} {RNA1509_8159} {RNA1310_62613} {RNA815_34878.1} | |
| 4. | MligTC455_24167 | 109 | 2.26 | Mlig455_008370 | Neo: - Age: - |
SKI | 1.691 | - | - | - | 0.960 | - | 0.731 | Mlig455_008370 {REF} {Length: 3400} {Pfam: c-SKI Smad4 binding domain [PF08782.12, score=99.7]; SKI/SNO/DAC family [PF02437.19, score=88.6]} {Human: ENSG00000157933, SKI, SKI proto-oncogene, [Score=183, Expect=4e-49]} {Mouse: ENSMUSG00000029050, Ski, ski sarcoma viral oncogene homolog (avian), [RH, Score=181, Expect=9e-49]} {Dmel: FBgn0085450, Snoo, Sno oncogene, [Score=157, Expect=5e-40]} {Smed: dd_Smed_v6_10921_0_1, dd_Smed_v6_10921_0_1, [RH, Score=147, Expect=6e-38]} {RNA1509_36922, RNA1509_50075} {RNA1310_20558, RNA1509_50075} {RNA1509_50075, RNA815_14389} |
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