TomoSeq data search

Data search

Results for MligTC455_24167

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24167

109

2.26

Mlig455_008370

Neo: -

Age: -

SKI

Mlig455_008370 {REF} {Length: 3400} {Pfam: c-SKI Smad4 binding domain [PF08782.12, score=99.7]; SKI/SNO/DAC family [PF02437.19, score=88.6]} {Human: ENSG00000157933, SKI, SKI proto-oncogene, [Score=183, Expect=4e-49]} {Mouse: ENSMUSG00000029050, Ski, ski sarcoma viral oncogene homolog (avian), [RH, Score=181, Expect=9e-49]} {Dmel: FBgn0085450, Snoo, Sno oncogene, [Score=157, Expect=5e-40]} {Smed: dd_Smed_v6_10921_0_1, dd_Smed_v6_10921_0_1, [RH, Score=147, Expect=6e-38]} {RNA1509_36922, RNA1509_50075} {RNA1310_20558, RNA1509_50075} {RNA1509_50075, RNA815_14389}

Cumulative graph for MligTC455_24167

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.55	2.076	0.23275	0.87519
RegionR2	0.024	2.076	0.85827	1.00000
RegionR3	0.944	2.076	0.33135	0.86926
RegionR4	0.992	2.076	0.34928	0.67076
RegionR5	0.977	2.076	0.27908	0.60654
RegionR6	1.503	2.076	0.08785	0.54576
RegionR7	1.436	2.076	0.18288	0.78180
RegionR8	-0.326	2.076	0.93712	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.65	2.076	0.99990	1.00000
RegenerationR2	-1.307	2.076	0.14757	0.57997
RegenerationR3	-0.84	2.076	0.25283	0.68725
RegenerationR4	-0.956	2.076	0.20871	0.65596
RegenerationR5	-0.627	2.076	0.33113	0.75231
RegenerationR6	-0.584	2.076	0.42598	0.75530
RegenerationBL	-0.651	2.076	0.57824	0.93072
RegenerationTP	-1.848	2.076	0.22657	0.67148

Genes with expression patterns similar to MligTC455_24167

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24167	109	2.26	Mlig455_008370	Neo: - Age: -	SKI	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008370 {REF} {Length: 3400} {Pfam: c-SKI Smad4 binding domain [PF08782.12, score=99.7]; SKI/SNO/DAC family [PF02437.19, score=88.6]} {Human: ENSG00000157933, SKI, SKI proto-oncogene, [Score=183, Expect=4e-49]} {Mouse: ENSMUSG00000029050, Ski, ski sarcoma viral oncogene homolog (avian), [RH, Score=181, Expect=9e-49]} {Dmel: FBgn0085450, Snoo, Sno oncogene, [Score=157, Expect=5e-40]} {Smed: dd_Smed_v6_10921_0_1, dd_Smed_v6_10921_0_1, [RH, Score=147, Expect=6e-38]} {RNA1509_36922, RNA1509_50075} {RNA1310_20558, RNA1509_50075} {RNA1509_50075, RNA815_14389}
2.	MligTC455_13229	225	4.68	Mlig455_065103	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.030 Region-enriched R6: 3.013/0.02437 Region-enriched R3: 2.780/0.02282		1.691	-	-	-	0.960	-	0.731	Mlig455_065103 {REF} {Length: 1740} {RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1310_24300.1, RNA1509_26431, RNA1509_42284, RNA1509_53537} {RNA1509_26431, RNA1509_42284, RNA1509_53537, RNA815_10899.1}
3.	MligTC455_21510	195	4.06	Mlig455_048307	Neo: Int S/G2/M Age: -		0.97	-	-	0.970	-	-	-	Mlig455_048307 {REF} {Length: 1947} {RNA1509_43144} {RNA1310_9878} {RNA815_24669}
4.	MligTC455_08784	74	1.55	Mlig455_018978	Neo: - Age: - Region-enriched R4: 3.721/0.00921		0.96	-	-	-	0.960	-	-	Mlig455_018978 {REF} {Length: 741} {RNA1310_46406}
5.	MligTC455_13267	74	1.54	Mlig455_025667	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.531	SLC43A3	0.957	-	-	-	0.957	-	-	Mlig455_025667 {REF} {Length: 2539} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.4]} {Human: ENSG00000134802, SLC43A3, solute carrier family 43 member 3, [RH, Score=115, Expect=4e-27]} {Mouse: ENSMUSG00000027074, Slc43a3, solute carrier family 43, member 3, [RH, Score=90.5, Expect=6e-19]} {Smed: dd_Smed_v6_28076_0_1, dd_Smed_v6_28076_0_1, [RH, Score=110, Expect=6e-26]} {RNA1509_56899} {RNA1310_15790} {RNA815_16551}

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