TomoSeq data search

Data search

Results for MligTC455_13267

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13267

74

1.54

Mlig455_025667

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.531

SLC43A3

Mlig455_025667 {REF} {Length: 2539} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.4]} {Human: ENSG00000134802, SLC43A3, solute carrier family 43 member 3, [RH, Score=115, Expect=4e-27]} {Mouse: ENSMUSG00000027074, Slc43a3, solute carrier family 43, member 3, [RH, Score=90.5, Expect=6e-19]} {Smed: dd_Smed_v6_28076_0_1, dd_Smed_v6_28076_0_1, [RH, Score=110, Expect=6e-26]} {RNA1509_56899} {RNA1310_15790} {RNA815_16551}

Cumulative graph for MligTC455_13267

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.342	1.808	0.99961	1.00000
RegionR2	-0.063	1.808	0.77803	1.00000
RegionR3	2.557	1.808	0.04926	0.38771
RegionR4	1.495	1.808	0.32939	0.64745
RegionR5	1.274	1.808	0.29041	0.62183
RegionR6	2.118	1.808	0.13961	0.67157
RegionR7	-2.475	1.808	0.99968	1.00000
RegionR8	-2.564	1.808	0.99963	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.362	1.808	0.99990	1.00000
RegenerationR2	0.883	1.808	0.63573	0.92980
RegenerationR3	1.102	1.808	0.38791	0.79459
RegenerationR4	1.551	1.808	0.28993	0.73404
RegenerationR5	2.186	1.808	0.07652	0.43229
RegenerationR6	2.025	1.808	0.08708	0.36886
RegenerationBL	4.706	1.808	0.01685	0.13829
RegenerationTP	3.482	1.808	0.24193	0.68812

Genes with expression patterns similar to MligTC455_13267

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13267	74	1.54	Mlig455_025667	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.531	SLC43A3	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_025667 {REF} {Length: 2539} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.4]} {Human: ENSG00000134802, SLC43A3, solute carrier family 43 member 3, [RH, Score=115, Expect=4e-27]} {Mouse: ENSMUSG00000027074, Slc43a3, solute carrier family 43, member 3, [RH, Score=90.5, Expect=6e-19]} {Smed: dd_Smed_v6_28076_0_1, dd_Smed_v6_28076_0_1, [RH, Score=110, Expect=6e-26]} {RNA1509_56899} {RNA1310_15790} {RNA815_16551}
2.	MligTC455_04549	296	6.16	Mlig455_047043	Neo: - Age: logFC(26M/2M)=0.556 Region-enriched R3: 2.204/0.00044 Region-enriched R4: 1.879/0.02998 Region-enriched R5: 1.340/0.03066	TYMP	2.46	0.750	-	-	0.952	0.758	-	Mlig455_047043 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_13641} {RNA815_1859}
3.	MligTC455_08784	74	1.55	Mlig455_018978	Neo: - Age: - Region-enriched R4: 3.721/0.00921		1.733	0.764	-	-	0.969	-	-	Mlig455_018978 {REF} {Length: 741} {RNA1310_46406}
4.	MligTC455_29312	242	5.04	Mlig455_024665	Neo: - Age: - Region-enriched R3: 2.630/0.00156 Region-enriched R5: 1.791/0.03664	SLC22A6	1.692	0.726	-	-	0.966	-	-	Mlig455_024665 {REF} {Length: 4159} {Pfam: Sugar (and other) transporter [PF00083.26, score=112.3]; Major Facilitator Superfamily [PF07690.18, score=83.6]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=174, Expect=4e-47]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=172, Expect=3e-46]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=2e-45]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=176, Expect=8e-48]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=132, Expect=7e-33]} {RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1310_6359.1, RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1509_13135, RNA1509_47373, RNA1509_50772, RNA815_24636}
5.	MligTC455_42771	37	0.78	Mlig455_012542	Neo: Int S/G2/M Age: -		0.969	-	-	-	0.969	-	-	Mlig455_012542 {REF} {Length: 514} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_88667} {RNA815_36352}
6.	MligTC455_29382	141	2.94	Mlig455_032367, Mlig455_068516	Neo: - Age: Up-Down-Down		0.962	-	-	-	0.962	-	-	Mlig455_032367 {REF} {Length: 11082} {RNA1509_34218, RNA1509_44206} {RNA1310_18727, RNA1509_34218} {RNA1509_34218, RNA815_16176.1} Mlig455_068516 {REF} {Length: 2460} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
7.	MligTC455_48797	154	3.21	Mlig455_054068	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_054068 {REF} {Length: 3150} {Dmel: FBgn0051195, CG31195, [Score=164, Expect=5e-43]} {Smed: dd_Smed_v6_2407_0_1, dd_Smed_v6_2407_0_1, [Score=264, Expect=4e-78]} {RNA1509_26475} {RNA1310_2842} {RNA815_1220.1}
8.	MligTC455_50788	55	1.14	Mlig455_001945	Neo: - Age: Down-Up-Up Region-enriched R4: 4.857/0.00120 Region-enriched R5: 3.283/0.00685	GATA6	0.959	-	-	-	0.959	-	-	Mlig455_001945 {REF} {Length: 1855} {tRNA: Val(CAC),pseudo, score=26.6} {Pfam: GATA zinc finger [PF00320.29, score=52.2]; TFIIB zinc-binding [PF08271.14, score=20.7]} {Human: ENSG00000141448, GATA6, GATA binding protein 6, [Score=87.8, Expect=1e-18]; ENSG00000136574, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=87.0, Expect=2e-18]} {Mouse: ENSMUSG00000005836, Gata6, GATA binding protein 6, [Score=87.0, Expect=2e-18]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [Score=85.5, Expect=4e-18]} {Dmel: FBgn0032223, GATAd, [RH, Score=87.0, Expect=1e-18]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_4075_0_1, dd_Smed_v6_4075_0_1, [Score=80.5, Expect=9e-17]} {RNA1509_47157} {RNA1310_45834} {RNA815_33962}
9.	MligTC455_04428	655	13.66	Mlig455_071088	Neo: - Age: - Region-enriched R4: 3.160/0.00859		0.958	-	-	-	0.958	-	-	Mlig455_071088 {REF} {Length: 272} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153}
10.	MligTC455_24167	109	2.26	Mlig455_008370	Neo: - Age: -	SKI	0.957	-	-	-	0.957	-	-	Mlig455_008370 {REF} {Length: 3400} {Pfam: c-SKI Smad4 binding domain [PF08782.12, score=99.7]; SKI/SNO/DAC family [PF02437.19, score=88.6]} {Human: ENSG00000157933, SKI, SKI proto-oncogene, [Score=183, Expect=4e-49]} {Mouse: ENSMUSG00000029050, Ski, ski sarcoma viral oncogene homolog (avian), [RH, Score=181, Expect=9e-49]} {Dmel: FBgn0085450, Snoo, Sno oncogene, [Score=157, Expect=5e-40]} {Smed: dd_Smed_v6_10921_0_1, dd_Smed_v6_10921_0_1, [RH, Score=147, Expect=6e-38]} {RNA1509_36922, RNA1509_50075} {RNA1310_20558, RNA1509_50075} {RNA1509_50075, RNA815_14389}
11.	MligTC455_53407	49	1.02	Mlig455_051620	Neo: - Age: -	VPS26C	0.951	-	-	-	0.951	-	-	Mlig455_051620 {REF} {Length: 2288} {TRANSSPLICED} {Pfam: Vacuolar protein sorting-associated protein 26 [PF03643.17, score=172.5]} {Human: ENSG00000157538, VPS26C, VPS26 endosomal protein sorting factor C, [RH, Score=376, Expect=2e-131]} {Mouse: ENSMUSG00000022898, Vps26c, VPS26 endosomal protein sorting factor C, [RH, Score=370, Expect=2e-129]} {Dmel: FBgn0037017, CG4074, [RH, Score=273, Expect=2e-91]} {Smed: dd_Smed_v6_3520_0_1, dd_Smed_v6_3520_0_1, [RH, Score=305, Expect=5e-104]} {RNA1509_28631} {RNA1310_29463} {RNA815_13522}

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