Data search
Results for MligTC455_13274
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13274 | 16 | 0.34 | Mlig455_010279 | Neo: - Age: logFC(26M/2M)=1.721 |
Mlig455_010279 {REF} {Length: 2636} {RNA1509_1271} {RNA1310_29091} {RNA815_25857} |
Cumulative graph for MligTC455_13274
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.112 | 0.825 | 1.00000 | 1.00000 | |
| RegionR2 | -0.201 | 0.825 | 1.00000 | 1.00000 | |
| RegionR3 | -1.541 | 0.825 | 1.00000 | 1.00000 | |
| RegionR4 | 1.583 | 0.825 | 0.89232 | 1.00000 | |
| RegionR5 | 0.778 | 0.825 | 0.98394 | 1.00000 | |
| RegionR6 | -1.444 | 0.825 | 1.00000 | 1.00000 | |
| RegionR7 | -0.029 | 0.825 | 1.00000 | 1.00000 | |
| RegionR8 | -0.257 | 0.825 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.051 | 0.825 | 1.00000 | 1.00000 | |
| RegenerationR2 | 2.094 | 0.825 | 0.14271 | 0.57371 | |
| RegenerationR3 | 2.157 | 0.825 | 0.36262 | 0.77842 | |
| RegenerationR4 | 1.329 | 0.825 | 0.58079 | 0.90556 | |
| RegenerationR5 | 1.7 | 0.825 | 0.34596 | 0.76113 | |
| RegenerationR6 | 3.508 | 0.825 | 0.25619 | 0.60641 | |
| RegenerationBL | 3.791 | 0.825 | 0.14732 | 0.45814 | |
| RegenerationTP | 3.395 | 0.825 | 0.46170 | 0.87516 |
Genes with expression patterns similar to MligTC455_13274
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13274 | 16 | 0.34 | Mlig455_010279 | Neo: - Age: logFC(26M/2M)=1.721 |
3 | 1.000 | - | - | - | 1.000 | 1.000 | Mlig455_010279 {REF} {Length: 2636} {RNA1509_1271} {RNA1310_29091} {RNA815_25857} | |
| 2. | MligTC455_24178 | 12 | 0.25 | Mlig455_007543 | Neo: Irradiation |
0.983 | 0.983 | - | - | - | - | - | Mlig455_007543 {REF} {Length: 5780} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=99.6]; Herpesvirus VP23 like capsid protein [PF01802.19, score=25.2]; Agenet domain [PF05641.14, score=21.9]; Survival motor neuron protein (SMN) [PF06003.14, score=18.8]; Fragile X mental retardation Tudor domain [PF18336.3, score=18.6]} {Dmel: FBgn0003891, tud, tudor, [Score=47.4, Expect=1e-05]} {RNA1509_3182} {RNA1310_4009} {RNA815_2495} | |
| 3. | MligTC455_39147 | 7 | 0.15 | Mlig455_064137 | Neo: - Age: logFC(26M/2M)=0.249 |
0.976 | - | - | - | - | 0.976 | - | Mlig455_064137 {REF} {Length: 6706} {TRANSSPLICED} {RNA1509_4947} {RNA1310_1498} {RNA815_18599} | |
| 4. | MligTC455_34066 | 149 | 3.1 | Mlig455_069292 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_069292 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_20753} {RNA1310_16791} {RNA815_12674.1} | |
| 5. | MligTC455_30649 | 19 | 0.39 | Mlig455_065054 | Neo: - Age: Down-Up-Down |
MAP3K4 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_065054 {REF} {Length: 3446} {Pfam: Protein kinase domain [PF00069.27, score=253.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=227.5]; Ankyrin repeats (3 copies) [PF12796.9, score=51.6]; Ankyrin repeats (many copies) [PF13637.8, score=42.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.4]; Fungal protein kinase [PF17667.3, score=33.3]; Ankyrin repeat [PF13606.8, score=30.6]; Ankyrin repeat [PF00023.32, score=30.4]; Phosphotransferase enzyme family [PF01636.25, score=29.1]; ABC1 atypical kinase-like domain [PF03109.18, score=26.3]; Kinase-like [PF14531.8, score=18.4]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=140, Expect=3e-33]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=1e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=135, Expect=7e-32]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=2e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=9e-31]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=122, Expect=4e-28]} {RNA1509_28827} {RNA1310_11289, RNA1509_28827} {RNA1509_28827, RNA815_5031} |
| 6. | MligTC455_18286 | 14 | 0.28 | Mlig455_055195 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_055195 {REF} {Length: 769} {Pfam: Protein of unknown function (DUF1031) [PF06275.13, score=25.5]} {RNA1310_99901} | |
| 7. | MligTC455_50990 | 120 | 2.5 | Mlig455_062680 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_062680 {REF} {Length: 1289} {RNA1509_19235} {RNA1310_6372.2} {RNA815_3528} | |
| 8. | MligTC455_30777 | 8 | 0.17 | Mlig455_056330 | Neo: - Age: - Region-enriched R2: 6.264/0.01224 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_056330 {REF} {Length: 1340} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_85705} {RNA815_12949} |
Berezikov Lab - 2020-2021 © ERIBA