TomoSeq data search

Data search

Results for MligTC455_30649

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30649	19	0.39	Mlig455_065054	Neo: - Age: Down-Up-Down	MAP3K4	Mlig455_065054 {REF} {Length: 3446} {Pfam: Protein kinase domain [PF00069.27, score=253.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=227.5]; Ankyrin repeats (3 copies) [PF12796.9, score=51.6]; Ankyrin repeats (many copies) [PF13637.8, score=42.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.4]; Fungal protein kinase [PF17667.3, score=33.3]; Ankyrin repeat [PF13606.8, score=30.6]; Ankyrin repeat [PF00023.32, score=30.4]; Phosphotransferase enzyme family [PF01636.25, score=29.1]; ABC1 atypical kinase-like domain [PF03109.18, score=26.3]; Kinase-like [PF14531.8, score=18.4]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=140, Expect=3e-33]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=1e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=135, Expect=7e-32]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=2e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=9e-31]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=122, Expect=4e-28]} {RNA1509_28827} {RNA1310_11289, RNA1509_28827} {RNA1509_28827, RNA815_5031}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30649

0.39

Mlig455_065054

Neo: -

Age: Down-Up-Down

MAP3K4

Mlig455_065054 {REF} {Length: 3446} {Pfam: Protein kinase domain [PF00069.27, score=253.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=227.5]; Ankyrin repeats (3 copies) [PF12796.9, score=51.6]; Ankyrin repeats (many copies) [PF13637.8, score=42.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.4]; Fungal protein kinase [PF17667.3, score=33.3]; Ankyrin repeat [PF13606.8, score=30.6]; Ankyrin repeat [PF00023.32, score=30.4]; Phosphotransferase enzyme family [PF01636.25, score=29.1]; ABC1 atypical kinase-like domain [PF03109.18, score=26.3]; Kinase-like [PF14531.8, score=18.4]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=140, Expect=3e-33]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=1e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=135, Expect=7e-32]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=2e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=9e-31]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=122, Expect=4e-28]} {RNA1509_28827} {RNA1310_11289, RNA1509_28827} {RNA1509_28827, RNA815_5031}

Cumulative graph for MligTC455_30649

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.679	0.723	0.99988	1.00000
RegionR2	1.697	0.723	0.99985	1.00000
RegionR3	-2.313	0.723	0.99993	1.00000
RegionR4	1.187	0.723	0.49222	0.81891
RegionR5	-1.359	0.723	0.99994	1.00000
RegionR6	-2.216	0.723	0.99994	1.00000
RegionR7	2.089	0.723	0.99995	1.00000
RegionR8	0.236	0.723	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.866	0.723	0.99992	1.00000
RegenerationR2	0.617	0.723	1.00000	1.00000
RegenerationR3	0.899	0.723	0.99986	1.00000
RegenerationR4	-0.892	0.723	0.99981	1.00000
RegenerationR5	-1.597	0.723	0.99950	1.00000
RegenerationR6	3.06	0.723	0.99953	1.00000
RegenerationBL	2.196	0.723	0.99965	1.00000
RegenerationTP	-1.502	0.723	0.99995	1.00000

Genes with expression patterns similar to MligTC455_30649

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30649	19	0.39	Mlig455_065054	Neo: - Age: Down-Up-Down	MAP3K4	1	-	-	-	-	1.000	-	Mlig455_065054 {REF} {Length: 3446} {Pfam: Protein kinase domain [PF00069.27, score=253.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=227.5]; Ankyrin repeats (3 copies) [PF12796.9, score=51.6]; Ankyrin repeats (many copies) [PF13637.8, score=42.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.4]; Fungal protein kinase [PF17667.3, score=33.3]; Ankyrin repeat [PF13606.8, score=30.6]; Ankyrin repeat [PF00023.32, score=30.4]; Phosphotransferase enzyme family [PF01636.25, score=29.1]; ABC1 atypical kinase-like domain [PF03109.18, score=26.3]; Kinase-like [PF14531.8, score=18.4]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=140, Expect=3e-33]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=135, Expect=1e-32]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=135, Expect=7e-32]} {Dmel: FBgn0024329, Mekk1, [Score=124, Expect=2e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=131, Expect=9e-31]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=122, Expect=4e-28]} {RNA1509_28827} {RNA1310_11289, RNA1509_28827} {RNA1509_28827, RNA815_5031}
2.	MligTC455_13274	16	0.34	Mlig455_010279	Neo: - Age: logFC(26M/2M)=1.721		0.971	-	-	-	-	0.971	-	Mlig455_010279 {REF} {Length: 2636} {RNA1509_1271} {RNA1310_29091} {RNA815_25857}
3.	MligTC455_37274	70	1.45	Mlig455_041775	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_041775 {REF} {Length: 768} {NoTransDecoderORF} {RNA1310_54549}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts