Data search
Results for MligTC455_13297
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13297 | 149 | 3.10 | Mlig455_032707 | Neo: - Age: Up-Up-Down |
TRAPPC2 | Mlig455_032707 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Sedlin, N-terminal conserved region [PF04628.15, score=137.8]; Sybindin-like family [PF04099.14, score=36.8]} {Human: ENSG00000196459, TRAPPC2, trafficking protein particle complex 2, [RH, Score=169, Expect=8e-55]; ENSG00000256060, TRAPPC2B, trafficking protein particle complex 2B, [RH, Score=169, Expect=8e-55]} {Mouse: ENSMUSG00000079317, Trappc2, trafficking protein particle complex 2, [RH, Score=170, Expect=3e-55]; ENSMUSG00000007777, 0610009B22Rik, RIKEN cDNA 0610009B22 gene, [RH, Score=170, Expect=4e-55]} {Dmel: FBgn0266724, Trs20, TRAPP subunit 20, [RH, Score=157, Expect=2e-50]} {Celegans: WBGene00021046, sedl-1, Probable trafficking protein particle complex subunit 2, [RH, Score=135, Expect=6e-42]} {Smed: dd_Smed_v6_3949_0_1, dd_Smed_v6_3949_0_1, [RH, Score=146, Expect=4e-46]} {RNA1509_26977, RNA1509_50495} {RNA1310_50084, RNA1509_26977, RNA1509_50495} {RNA1509_26977, RNA1509_50495, RNA815_26077} |
Cumulative graph for MligTC455_13297
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.08 | 2.439 | 0.09441 | 0.65679 | |
| RegionR2 | 1.734 | 2.439 | 0.15434 | 0.49140 | |
| RegionR3 | 1.95 | 2.439 | 0.04516 | 0.37206 | |
| RegionR4 | 0.651 | 2.439 | 0.56253 | 0.88215 | |
| RegionR5 | 1.028 | 2.439 | 0.29790 | 0.63221 | |
| RegionR6 | 1.07 | 2.439 | 0.31232 | 0.90145 | |
| RegionR7 | 1.47 | 2.439 | 0.17036 | 0.75950 | |
| RegionR8 | -0.822 | 2.439 | 0.98094 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.848 | 2.439 | 0.99968 | 1.00000 | |
| RegenerationR2 | -0.565 | 2.439 | 0.51240 | 0.87667 | |
| RegenerationR3 | 0.2 | 2.439 | 0.80330 | 0.98344 | |
| RegenerationR4 | -0.098 | 2.439 | 0.91961 | 1.00000 | |
| RegenerationR5 | 0.449 | 2.439 | 0.56743 | 0.89519 | |
| RegenerationR6 | 1.104 | 2.439 | 0.20936 | 0.55248 | |
| RegenerationBL | -0.792 | 2.439 | 0.58761 | 0.93783 | |
| RegenerationTP | -0.092 | 2.439 | 0.94297 | 1.00000 |
Genes with expression patterns similar to MligTC455_13297
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13297 | 149 | 3.1 | Mlig455_032707 | Neo: - Age: Up-Up-Down |
TRAPPC2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032707 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Sedlin, N-terminal conserved region [PF04628.15, score=137.8]; Sybindin-like family [PF04099.14, score=36.8]} {Human: ENSG00000196459, TRAPPC2, trafficking protein particle complex 2, [RH, Score=169, Expect=8e-55]; ENSG00000256060, TRAPPC2B, trafficking protein particle complex 2B, [RH, Score=169, Expect=8e-55]} {Mouse: ENSMUSG00000079317, Trappc2, trafficking protein particle complex 2, [RH, Score=170, Expect=3e-55]; ENSMUSG00000007777, 0610009B22Rik, RIKEN cDNA 0610009B22 gene, [RH, Score=170, Expect=4e-55]} {Dmel: FBgn0266724, Trs20, TRAPP subunit 20, [RH, Score=157, Expect=2e-50]} {Celegans: WBGene00021046, sedl-1, Probable trafficking protein particle complex subunit 2, [RH, Score=135, Expect=6e-42]} {Smed: dd_Smed_v6_3949_0_1, dd_Smed_v6_3949_0_1, [RH, Score=146, Expect=4e-46]} {RNA1509_26977, RNA1509_50495} {RNA1310_50084, RNA1509_26977, RNA1509_50495} {RNA1509_26977, RNA1509_50495, RNA815_26077} |
| 2. | MligTC455_24349 | 98 | 2.03 | Mlig455_047679 | Neo: - Age: - Region-enriched R4: 4.677/0.01732 |
GATA4 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_047679 {REF} {Length: 1965} {Pfam: GATA zinc finger [PF00320.29, score=48.5]} {Human: ENSG00000136574, GATA4, GATA binding protein 4, [Score=94.7, Expect=1e-20]; ENSG00000285109, GATA4, GATA binding protein 4, [Score=94.7, Expect=1e-20]; ENSG00000141448, GATA6, GATA binding protein 6, [Score=92.8, Expect=1e-19]} {Mouse: ENSMUSG00000015627, Gata5, GATA binding protein 5, [Score=100, Expect=5e-23]} {Dmel: FBgn0003507, srp, serpent, [Score=91.3, Expect=2e-19]} {Celegans: WBGene00001250, elt-2, Transcription factor elt-2, [Score=86.3, Expect=3e-18]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [Score=87.8, Expect=5e-19]} {RNA1310_22834.1} {RNA815_35309} |
| 3. | MligTC455_23398 | 70 | 1.47 | Mlig455_058118 | Neo: - Age: Up-Down-Up Region-enriched R4: 5.079/0.00128 |
NGLY1 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_058118 {REF} {Length: 4244} {Pfam: PNGase C-terminal domain, mannose-binding module PAW [PF04721.19, score=209.5]; PUB domain [PF09409.12, score=60.6]; Thioredoxin [PF00085.22, score=45.0]; Rad4 transglutaminase-like domain [PF03835.17, score=30.0]} {Human: ENSG00000151092, NGLY1, N-glycanase 1, [Score=330, Expect=2e-100]} {Mouse: ENSMUSG00000021785, Ngly1, N-glycanase 1, [Score=347, Expect=6e-107]} {Dmel: FBgn0033050, Pngl, PNGase-like, [Score=244, Expect=1e-69]} {Celegans: WBGene00010160, png-1, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, [Score=196, Expect=6e-53]} {Smed: dd_Smed_v6_5705_0_1, dd_Smed_v6_5705_0_1, [Score=244, Expect=1e-68]} {RNA1509_9974} {RNA1310_3958} {RNA815_834.1} |
| 4. | MligTC455_29911 | 17 | 0.36 | Mlig455_065056 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_065056 {REF} {Length: 1439} {RNA1310_24598} {RNA815_13918} | |
| 5. | MligTC455_48464 | 642 | 13.37 | Mlig455_014363, Mlig455_034468 | Neo: - Age: Down-Up-Down Region-enriched R3: 1.858/0.00148 |
WASHC1 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_014363 {REF} {Length: 2191} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=119.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=123, Expect=6e-30]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=125, Expect=8e-31]} {Dmel: FBgn0033692, wash, washout, [RH, Score=76.6, Expect=1e-14]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_20623} {RNA1310_37341} {RNA815_18278} Mlig455_034468 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=153.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=147, Expect=2e-38]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=151, Expect=8e-40]} {Dmel: FBgn0033692, wash, washout, [RH, Score=90.5, Expect=4e-19]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=96.7, Expect=4e-22]} {RNA1509_20623, RNA1509_44526} {RNA1310_37341, RNA1509_20623, RNA1509_44526} {RNA1509_20623, RNA1509_44526, RNA815_18278} |
| 6. | MligTC455_10705 | 24 | 0.5 | Mlig455_032848 | Neo: Int S/G2/M Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_032848 {REF} {Length: 4340} {Pfam: F5/8 type C domain [PF00754.27, score=25.3]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=50.4, Expect=5e-08]} {RNA1509_42928} {RNA1310_28879} {RNA815_25813.1} | |
| 7. | MligTC455_34912 | 35 | 0.74 | Mlig455_024825 | Neo: Irradiation Age: - |
TADA2B | 0.952 | - | - | - | - | 0.952 | - | Mlig455_024825 {REF} {Length: 3952} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=36.9]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [RH, Score=161, Expect=3e-42]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [RH, Score=161, Expect=2e-42]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [RH, Score=129, Expect=6e-31]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [RH, Score=214, Expect=4e-61]} {RNA1509_11799} {RNA1310_29035} {RNA815_19546} |
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