Data search
Results for MligTC455_10705
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10705 | 24 | 0.50 | Mlig455_032848 | Neo: Int S/G2/M Age: - |
Mlig455_032848 {REF} {Length: 4340} {Pfam: F5/8 type C domain [PF00754.27, score=25.3]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=50.4, Expect=5e-08]} {RNA1509_42928} {RNA1310_28879} {RNA815_25813.1} |
Cumulative graph for MligTC455_10705
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.503 | 0.838 | 1.00000 | 1.00000 | |
| RegionR2 | 1.274 | 0.838 | 0.54933 | 0.91532 | |
| RegionR3 | -0.869 | 0.838 | 0.97753 | 1.00000 | |
| RegionR4 | 0.842 | 0.838 | 0.56680 | 0.88571 | |
| RegionR5 | -0.46 | 0.838 | 0.93312 | 1.00000 | |
| RegionR6 | 0.656 | 0.838 | 0.61586 | 1.00000 | |
| RegionR7 | -0.043 | 0.838 | 0.86585 | 1.00000 | |
| RegionR8 | -0.895 | 0.838 | 0.99989 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.415 | 0.838 | 0.87601 | 1.00000 | |
| RegenerationR2 | -1.93 | 0.838 | 0.09895 | 0.49779 | |
| RegenerationR3 | 1.65 | 0.838 | 0.36008 | 0.77669 | |
| RegenerationR4 | -0.133 | 0.838 | 0.94355 | 1.00000 | |
| RegenerationR5 | 2.023 | 0.838 | 0.16274 | 0.58728 | |
| RegenerationR6 | 0.882 | 0.838 | 0.60511 | 0.87123 | |
| RegenerationBL | -0.932 | 0.838 | 0.95688 | 1.00000 | |
| RegenerationTP | -1.086 | 0.838 | 0.97115 | 1.00000 |
Genes with expression patterns similar to MligTC455_10705
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10705 | 24 | 0.5 | Mlig455_032848 | Neo: Int S/G2/M Age: - |
2 | - | - | 1.000 | - | 1.000 | - | Mlig455_032848 {REF} {Length: 4340} {Pfam: F5/8 type C domain [PF00754.27, score=25.3]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=50.4, Expect=5e-08]} {RNA1509_42928} {RNA1310_28879} {RNA815_25813.1} | |
| 2. | MligTC455_17829 | 125 | 2.61 | Mlig455_048462 | Neo: - Age: Up-Up-Down |
KEAP1 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_048462 {REF} {Length: 3268} {Pfam: Kelch motif [PF01344.27, score=223.7]; Kelch motif [PF13964.8, score=132.4]; Kelch motif [PF07646.17, score=82.2]; Galactose oxidase, central domain [PF13418.8, score=81.0]; Galactose oxidase, central domain [PF13415.8, score=71.3]; Kelch motif [PF13854.8, score=41.4]} {Human: ENSG00000079999, KEAP1, kelch like ECH associated protein 1, [Score=270, Expect=5e-85]} {Mouse: ENSMUSG00000003308, Keap1, kelch-like ECH-associated protein 1, [Score=264, Expect=5e-83]} {Dmel: FBgn0038475, Keap1, [Score=269, Expect=9e-84]} {Celegans: WBGene00002185, kel-3, KELch-repeat containing protein, [Score=131, Expect=1e-33]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=342, Expect=2e-113]} {RNA1509_23206} {RNA1310_45235} {RNA815_31075} |
| 3. | MligTC455_24030 | 17 | 0.35 | Mlig455_059549 | Neo: - |
KIAA1958 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_059549 {REF} {Length: 3195} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=48.6]; Protein of unknown function (DUF2722) [PF10846.10, score=19.3]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [Score=109, Expect=5e-24]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_38033_0_1, dd_Smed_v6_38033_0_1, [RH, Score=262, Expect=3e-77]} {RNA1509_42634} {RNA1310_7941} {RNA815_1267} |
| 4. | MligTC455_13297 | 149 | 3.1 | Mlig455_032707 | Neo: - Age: Up-Up-Down |
TRAPPC2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_032707 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Sedlin, N-terminal conserved region [PF04628.15, score=137.8]; Sybindin-like family [PF04099.14, score=36.8]} {Human: ENSG00000196459, TRAPPC2, trafficking protein particle complex 2, [RH, Score=169, Expect=8e-55]; ENSG00000256060, TRAPPC2B, trafficking protein particle complex 2B, [RH, Score=169, Expect=8e-55]} {Mouse: ENSMUSG00000079317, Trappc2, trafficking protein particle complex 2, [RH, Score=170, Expect=3e-55]; ENSMUSG00000007777, 0610009B22Rik, RIKEN cDNA 0610009B22 gene, [RH, Score=170, Expect=4e-55]} {Dmel: FBgn0266724, Trs20, TRAPP subunit 20, [RH, Score=157, Expect=2e-50]} {Celegans: WBGene00021046, sedl-1, Probable trafficking protein particle complex subunit 2, [RH, Score=135, Expect=6e-42]} {Smed: dd_Smed_v6_3949_0_1, dd_Smed_v6_3949_0_1, [RH, Score=146, Expect=4e-46]} {RNA1509_26977, RNA1509_50495} {RNA1310_50084, RNA1509_26977, RNA1509_50495} {RNA1509_26977, RNA1509_50495, RNA815_26077} |
| 5. | MligTC455_29911 | 17 | 0.36 | Mlig455_065056 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_065056 {REF} {Length: 1439} {RNA1310_24598} {RNA815_13918} | |
| 6. | MligTC455_38733 | 112 | 2.34 | Mlig455_004261 | Neo: - Age: Down-Up-Down |
BCKDHB | 0.95 | - | - | - | - | 0.950 | - | Mlig455_004261 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=142.2]; Transketolase, C-terminal domain [PF02780.22, score=100.8]; Domain of unknown function DUF108 [PF01958.20, score=66.6]; Homoserine dehydrogenase, NAD binding domain [PF03447.18, score=50.6]} {Human: ENSG00000083123, BCKDHB, branched chain keto acid dehydrogenase E1 subunit beta, [Score=478, Expect=3e-165]} {Mouse: ENSMUSG00000032263, Bckdhb, branched chain ketoacid dehydrogenase E1, beta polypeptide, [Score=481, Expect=1e-166]} {Dmel: FBgn0039993, CG17691, [Score=419, Expect=1e-142]} {Celegans: WBGene00006518, bckd-1B, Branched Chain Keto acid Dehydrogenase e1 (E1) subunit, [Score=386, Expect=5e-130]} {Smed: dd_Smed_v6_2949_0_1, dd_Smed_v6_2949_0_1, [Score=410, Expect=3e-140]} {RNA1509_14939} {RNA1310_14019} {RNA815_14107} |
Berezikov Lab - 2020-2021 © ERIBA