Data search
Results for MligTC455_13343
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13343 | 116 | 2.41 | Mlig455_027742 | Neo: - Age: - |
Mlig455_027742 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_39291} {RNA1310_78357} |
Cumulative graph for MligTC455_13343
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.987 | 2.135 | 0.99980 | 1.00000 | |
| RegionR2 | -0.563 | 2.135 | 0.88189 | 1.00000 | |
| RegionR3 | -0.189 | 2.135 | 0.81382 | 1.00000 | |
| RegionR4 | 3.26 | 2.135 | 0.00935 | 0.05805 | |
| RegionR5 | 0.823 | 2.135 | 0.44997 | 0.81158 | |
| RegionR6 | -0.287 | 2.135 | 0.83358 | 1.00000 | |
| RegionR7 | 1.48 | 2.135 | 0.30816 | 0.94228 | |
| RegionR8 | -3.537 | 2.135 | 0.99953 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.377 | 2.135 | 0.99985 | 1.00000 | |
| RegenerationR2 | 0.936 | 2.135 | 0.15356 | 0.58914 | |
| RegenerationR3 | 0.886 | 2.135 | 0.34566 | 0.76891 | |
| RegenerationR4 | -0.534 | 2.135 | 0.50733 | 0.87305 | |
| RegenerationR5 | 0.781 | 2.135 | 0.32094 | 0.74445 | |
| RegenerationR6 | 1.476 | 2.135 | 0.10746 | 0.40565 | |
| RegenerationBL | 2.409 | 2.135 | 0.09402 | 0.36043 | |
| RegenerationTP | 2.323 | 2.135 | 0.25855 | 0.70626 |
Genes with expression patterns similar to MligTC455_13343
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13343 | 116 | 2.41 | Mlig455_027742 | Neo: - Age: - |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027742 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_39291} {RNA1310_78357} | |
| 2. | MligTC455_47624 | 138 | 2.88 | Mlig455_029496 | Neo: - Age: - Regeneration-upregulated BL: 3.356 Regeneration-enriched BL: 3.356 |
1.877 | 0.980 | - | - | 0.897 | - | - | Mlig455_029496 {REF} {Length: 2269} {RNA1310_46901} | |
| 3. | MligTC455_15248 | 248 | 5.17 | Mlig455_066734 | Neo: - Age: - |
RBM12 | 1.734 | - | - | - | 0.778 | - | 0.956 | Mlig455_066734 {REF} {Length: 4367} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.4]} {Human: ENSG00000244462, RBM12, RNA binding motif protein 12, [Score=94.0, Expect=6e-19]; ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=89.7, Expect=1e-17]} {Mouse: ENSMUSG00000089824, Rbm12, RNA binding motif protein 12, [Score=94.7, Expect=2e-19]; ENSMUSG00000098950, Gm28036, predicted gene, 28036, [Score=92.8, Expect=7e-19]} {Dmel: FBgn0035235, CG7879, [RH, Score=118, Expect=9e-27]} {Celegans: WBGene00013703, Y106G6D.7, [RH, Score=96.7, Expect=4e-20]} {Smed: dd_Smed_v6_5908_0_1, dd_Smed_v6_5908_0_1, [RH, Score=108, Expect=5e-24]} {RNA1509_37534, RNA1509_56537, RNA1509_7941} {RNA1310_4040.1, RNA1509_37534, RNA1509_56537, RNA1509_7941} {RNA1509_37534, RNA1509_56537, RNA1509_7941, RNA815_10772} |
| 4. | MligTC455_41093 | 163 | 3.39 | Mlig455_038250 | Neo: - Age: - |
1.727 | 0.989 | - | - | - | - | 0.738 | Mlig455_038250 {REF} {Length: 1532} {NoTransDecoderORF} {RNA1509_25125} {RNA1310_234.1} {RNA815_23.1} | |
| 5. | MligTC455_28042 | 408 | 8.5 | Mlig455_025125 | Neo: - Age: - |
LDB2 | 1.702 | - | - | - | 0.954 | 0.748 | - | Mlig455_025125 {REF} {Length: 3480} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=99.3]; LIM interaction domain (LID) [PF17916.3, score=40.0]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=218, Expect=2e-64]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=212, Expect=2e-62]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=208, Expect=5e-61]} {Dmel: FBgn0013764, Chi, Chip, [Score=190, Expect=1e-52]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=81.3, Expect=7e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=201, Expect=2e-56]} {RNA1509_58910} {RNA1310_20938} {RNA815_15319} |
| 6. | MligTC455_40705 | 147 | 3.06 | Mlig455_052679 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.574 Region-enriched R5: 2.243/0.01305 |
CCDC174 | 1.702 | 0.953 | - | - | 0.749 | - | - | Mlig455_052679 {REF} {Length: 1082} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4078) [PF13300.8, score=45.4]} {Human: ENSG00000154781, CCDC174, coiled-coil domain containing 174, [Score=51.6, Expect=1e-06]} {RNA1509_19175} {RNA1310_28722} {RNA815_14570} |
| 7. | MligTC455_47671 | 92 | 1.92 | Mlig455_066785 | Neo: - |
1.673 | 0.960 | - | - | - | - | 0.713 | Mlig455_066785 {REF} {Length: 6958} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=29.8]} {RNA1509_15853} {RNA1310_18916} {RNA815_34185} | |
| 8. | MligTC455_36694 | 24 | 0.49 | Mlig455_017297 | Neo: - Age: Down-Down-Up |
TFDP1 | 0.984 | 0.984 | - | - | - | - | - | Mlig455_017297 {REF} {Length: 3998} {TRANSSPLICED} {Pfam: Transcription factor DP [PF08781.12, score=114.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.9]; E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=43.7]} {Human: ENSG00000198176, TFDP1, transcription factor Dp-1, [RH, Score=213, Expect=1e-60]; ENSG00000114126, TFDP2, transcription factor Dp-2, [RH, Score=206, Expect=3e-58]} {Mouse: ENSMUSG00000038482, Tfdp1, transcription factor Dp 1, [RH, Score=211, Expect=4e-60]; ENSMUSG00000032411, Tfdp2, transcription factor Dp 2, [RH, Score=206, Expect=2e-58]} {Dmel: FBgn0011763, Dp, DP transcription factor, [RH, Score=171, Expect=7e-46]} {Celegans: WBGene00001061, dpl-1, Transcription factor dpl-1, [RH, Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_3643_0_1, dd_Smed_v6_3643_0_1, [RH, Score=157, Expect=1e-41]} {RNA1509_33515} {RNA1310_10603} {RNA815_9206} |
| 9. | MligTC455_29353 | 165 | 3.43 | Mlig455_023799 | Neo: - Age: Down-Up-Down |
SLC39A11 | 0.973 | 0.973 | - | - | - | - | - | Mlig455_023799 {REF} {Length: 2864} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=78.9]} {Human: ENSG00000133195, SLC39A11, solute carrier family 39 member 11, [RH, Score=288, Expect=5e-95]; ENSG00000285189, SLC39A11, solute carrier family 39 member 11, [RH, Score=288, Expect=5e-95]} {Mouse: ENSMUSG00000041654, Slc39a11, solute carrier family 39 (metal ion transporter), member 11, [RH, Score=282, Expect=6e-93]} {Dmel: FBgn0033665, Zip48C, Zinc/iron regulated transporter-related protein 48C, [RH, Score=271, Expect=7e-89]} {Celegans: WBGene00019077, zipt-11, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=280, Expect=1e-92]} {RNA1509_16579, RNA1509_45417} {RNA1310_24853, RNA1509_16579, RNA1509_45417} {RNA1509_16579, RNA1509_45417, RNA815_13725} |
| 10. | MligTC455_21435 | 37 | 0.77 | Mlig455_016499 | Neo: - Age: - |
RTL1 | 0.972 | 0.972 | - | - | - | - | - | Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816} |
| 11. | MligTC455_19614 | 323 | 6.74 | Mlig455_010255 | Neo: Irradiation Age: - Regeneration-upregulated R6: 1.895 Regeneration-enriched R6: 1.895 |
UBA2 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_010255 {REF} {Length: 3157} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=214.7]; Ubiquitin/SUMO-activating enzyme ubiquitin-like domain [PF14732.8, score=59.1]; Ubiquitin-activating enzyme active site [PF10585.11, score=36.2]; Putative NAD(P)-binding [PF13241.8, score=25.1]} {Human: ENSG00000126261, UBA2, ubiquitin like modifier activating enzyme 2, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000052997, Uba2, ubiquitin-like modifier activating enzyme 2, [RH, Score=626, Expect=0.0]} {Dmel: FBgn0029113, Uba2, Ubiquitin activating enzyme 2, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00006700, uba-2, SUMO-activating enzyme subunit uba-2, [RH, Score=495, Expect=2e-169]} {Smed: dd_Smed_v6_10031_0_1, dd_Smed_v6_10031_0_1, [RH, Score=383, Expect=4e-129]} {RNA1509_11195, RNA1509_43346} {RNA1310_4891.1, RNA1509_11195, RNA1509_43346} {RNA1509_11195, RNA1509_43346, RNA815_2746} |
| 12. | MligTC455_33362 | 91 | 1.89 | Mlig455_044594 | Neo: - Age: logFC(26M/2M)=-0.300 |
0.97 | 0.970 | - | - | - | - | - | Mlig455_044594 {REF} {Length: 3890} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=46.0]; EF hand [PF00036.34, score=37.3]; EF-hand domain [PF13405.8, score=35.1]; EF hand [PF13202.8, score=25.9]} {RNA1509_5069} {RNA1310_3608.1} {RNA815_1684.1} | |
| 13. | MligTC455_50467 | 111 | 2.32 | Mlig455_023732 | Neo: Int S/G2/M Age: - |
PPTC7 | 0.969 | 0.969 | - | - | - | - | - | Mlig455_023732 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Stage II sporulation protein E (SpoIIE) [PF07228.14, score=56.9]; Protein phosphatase 2C [PF00481.23, score=22.5]} {Human: ENSG00000196850, PPTC7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=6e-28]} {Mouse: ENSMUSG00000038582, Pptc7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=5e-28]} {Dmel: FBgn0035228, CG12091, [RH, Score=119, Expect=7e-31]} {Celegans: WBGene00012362, W09D10.4, [RH, Score=71.2, Expect=9e-14]} {Smed: dd_Smed_v6_8466_0_1, dd_Smed_v6_8466_0_1, [RH, Score=94.0, Expect=1e-21]} {RNA1509_38788} {RNA1310_25907, RNA1509_38788} {RNA1509_38788, RNA815_7571} |
| 14. | MligTC455_43096 | 70 | 1.46 | Mlig455_019855 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_019855 {REF} {Length: 881} {Pfam: PDZ domain [PF00595.26, score=37.0]; PDZ domain [PF17820.3, score=18.5]} {RNA1310_63055} {RNA815_40159} | |
| 15. | MligTC455_50462 | 697 | 14.52 | Mlig455_007876, Mlig455_007979, Mlig455_021146 | Neo: - Age: logFC(26M/2M)=0.575 Region-enriched R4: 1.899/0.03615 |
0.961 | 0.961 | - | - | - | - | - | Mlig455_007876 {REF} {Length: 1922} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} Mlig455_007979 {REF} {Length: 2471} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} Mlig455_021146 {REF} {Length: 2129} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1} |
|
| 16. | MligTC455_27881 | 54 | 1.12 | Mlig455_062466 | Neo: - |
0.959 | 0.959 | - | - | - | - | - | Mlig455_062466 {REF} {Length: 5589} {Pfam: Mab-21 protein [PF03281.16, score=30.3]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1} | |
| 17. | MligTC455_44946 | 83 | 1.73 | Mlig455_046261, Mlig455_066038 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.905/0.02618 |
POLQ, PRR9 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_046261 {REF} {Length: 9223} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=307.8]; Helicase conserved C-terminal domain [PF00271.33, score=41.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000051341, POLQ, DNA polymerase theta, [RH, Score=610, Expect=5e-178]} {Mouse: ENSMUSG00000034206, Polq, polymerase (DNA directed), theta, [RH, Score=613, Expect=2e-179]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [RH, Score=575, Expect=7e-169]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [RH, Score=308, Expect=3e-84]} {Smed: dd_Smed_v6_51730_0_3, dd_Smed_v6_51730_0_3, [RH, Score=253, Expect=8e-76]} {RNA1509_38802} {RNA1310_1092} {RNA815_20127} Mlig455_066038 {REF} {Length: 1082} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.4, Expect=1e-05]} {RNA1310_62396} |
| 18. | MligTC455_17369 | 111 | 2.31 | Mlig455_031598 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_031598 {REF} {Length: 2118} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.5]; Ankyrin repeats (many copies) [PF13857.8, score=36.6]; Ankyrin repeat [PF13606.8, score=29.3]; Ankyrin repeats (many copies) [PF13637.8, score=19.7]} {Celegans: WBGene00003400, dapk-1, Death-associated protein kinase dapk-1, [Score=48.9, Expect=5e-06]} {RNA1509_57756} {RNA1310_18326.1, RNA1509_57756} {RNA1509_57756, RNA815_31517} |
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