Data search
Results for MligTC455_50467
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50467 | 111 | 2.32 | Mlig455_023732 | Neo: Int S/G2/M Age: - |
PPTC7 | Mlig455_023732 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Stage II sporulation protein E (SpoIIE) [PF07228.14, score=56.9]; Protein phosphatase 2C [PF00481.23, score=22.5]} {Human: ENSG00000196850, PPTC7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=6e-28]} {Mouse: ENSMUSG00000038582, Pptc7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=5e-28]} {Dmel: FBgn0035228, CG12091, [RH, Score=119, Expect=7e-31]} {Celegans: WBGene00012362, W09D10.4, [RH, Score=71.2, Expect=9e-14]} {Smed: dd_Smed_v6_8466_0_1, dd_Smed_v6_8466_0_1, [RH, Score=94.0, Expect=1e-21]} {RNA1509_38788} {RNA1310_25907, RNA1509_38788} {RNA1509_38788, RNA815_7571} |
Cumulative graph for MligTC455_50467
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.867 | 2.057 | 0.35305 | 0.99654 | |
| RegionR2 | 1.185 | 2.057 | 0.29759 | 0.68619 | |
| RegionR3 | 1.752 | 2.057 | 0.08497 | 0.51586 | |
| RegionR4 | 0.531 | 2.057 | 0.50092 | 0.82754 | |
| RegionR5 | 1.827 | 2.057 | 0.04789 | 0.18180 | |
| RegionR6 | 1.323 | 2.057 | 0.18686 | 0.75337 | |
| RegionR7 | -4.343 | 2.057 | 0.99984 | 1.00000 | |
| RegionR8 | -4.142 | 2.057 | 0.99966 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.633 | 2.057 | 0.32255 | 1.00000 | |
| RegenerationR2 | -0.028 | 2.057 | 0.98303 | 1.00000 | |
| RegenerationR3 | -0.937 | 2.057 | 0.32738 | 0.75400 | |
| RegenerationR4 | -0.28 | 2.057 | 0.78516 | 0.98244 | |
| RegenerationR5 | -0.797 | 2.057 | 0.35596 | 0.76823 | |
| RegenerationR6 | 0.509 | 2.057 | 0.58210 | 0.85864 | |
| RegenerationBL | 2.829 | 2.057 | 0.13877 | 0.44418 | |
| RegenerationTP | 4.023 | 2.057 | 0.12530 | 0.53562 |
Genes with expression patterns similar to MligTC455_50467
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50467 | 111 | 2.32 | Mlig455_023732 | Neo: Int S/G2/M Age: - |
PPTC7 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_023732 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Stage II sporulation protein E (SpoIIE) [PF07228.14, score=56.9]; Protein phosphatase 2C [PF00481.23, score=22.5]} {Human: ENSG00000196850, PPTC7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=6e-28]} {Mouse: ENSMUSG00000038582, Pptc7, PTC7 protein phosphatase homolog, [RH, Score=112, Expect=5e-28]} {Dmel: FBgn0035228, CG12091, [RH, Score=119, Expect=7e-31]} {Celegans: WBGene00012362, W09D10.4, [RH, Score=71.2, Expect=9e-14]} {Smed: dd_Smed_v6_8466_0_1, dd_Smed_v6_8466_0_1, [RH, Score=94.0, Expect=1e-21]} {RNA1509_38788} {RNA1310_25907, RNA1509_38788} {RNA1509_38788, RNA815_7571} |
| 2. | MligTC455_41093 | 163 | 3.39 | Mlig455_038250 | Neo: - Age: - |
1.881 | 0.987 | - | - | 0.894 | - | - | Mlig455_038250 {REF} {Length: 1532} {NoTransDecoderORF} {RNA1509_25125} {RNA1310_234.1} {RNA815_23.1} | |
| 3. | MligTC455_44946 | 83 | 1.73 | Mlig455_046261, Mlig455_066038 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.905/0.02618 |
POLQ, PRR9 | 1.78 | 0.979 | - | - | - | - | 0.801 | Mlig455_046261 {REF} {Length: 9223} {TRANSSPLICED} {Pfam: DNA polymerase family A [PF00476.22, score=307.8]; Helicase conserved C-terminal domain [PF00271.33, score=41.2]; DEAD/DEAH box helicase [PF00270.31, score=22.4]} {Human: ENSG00000051341, POLQ, DNA polymerase theta, [RH, Score=610, Expect=5e-178]} {Mouse: ENSMUSG00000034206, Polq, polymerase (DNA directed), theta, [RH, Score=613, Expect=2e-179]} {Dmel: FBgn0002905, mus308, mutagen-sensitive 308, [RH, Score=575, Expect=7e-169]} {Celegans: WBGene00020964, polq-1, DNA polymerase theta, [RH, Score=308, Expect=3e-84]} {Smed: dd_Smed_v6_51730_0_3, dd_Smed_v6_51730_0_3, [RH, Score=253, Expect=8e-76]} {RNA1509_38802} {RNA1310_1092} {RNA815_20127} Mlig455_066038 {REF} {Length: 1082} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=42.4, Expect=1e-05]} {RNA1310_62396} |
| 4. | MligTC455_36694 | 24 | 0.49 | Mlig455_017297 | Neo: - Age: Down-Down-Up |
TFDP1 | 1.765 | 0.976 | - | - | 0.789 | - | - | Mlig455_017297 {REF} {Length: 3998} {TRANSSPLICED} {Pfam: Transcription factor DP [PF08781.12, score=114.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.9]; E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=43.7]} {Human: ENSG00000198176, TFDP1, transcription factor Dp-1, [RH, Score=213, Expect=1e-60]; ENSG00000114126, TFDP2, transcription factor Dp-2, [RH, Score=206, Expect=3e-58]} {Mouse: ENSMUSG00000038482, Tfdp1, transcription factor Dp 1, [RH, Score=211, Expect=4e-60]; ENSMUSG00000032411, Tfdp2, transcription factor Dp 2, [RH, Score=206, Expect=2e-58]} {Dmel: FBgn0011763, Dp, DP transcription factor, [RH, Score=171, Expect=7e-46]} {Celegans: WBGene00001061, dpl-1, Transcription factor dpl-1, [RH, Score=170, Expect=2e-44]} {Smed: dd_Smed_v6_3643_0_1, dd_Smed_v6_3643_0_1, [RH, Score=157, Expect=1e-41]} {RNA1509_33515} {RNA1310_10603} {RNA815_9206} |
| 5. | MligTC455_33267 | 101 | 2.1 | Mlig455_069231 | Neo: - Age: - |
ZFYVE1 | 0.978 | - | - | - | 0.978 | - | - | Mlig455_069231 {REF} {Length: 5589} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=89.8]} {Human: ENSG00000165861, ZFYVE1, zinc finger FYVE-type containing 1, [Score=425, Expect=1e-135]} {Mouse: ENSMUSG00000042628, Zfyve1, zinc finger, FYVE domain containing 1, [Score=424, Expect=1e-135]} {Dmel: FBgn0051064, CG31064, [Score=55.1, Expect=3e-07]} {Celegans: WBGene00004101, hgrs-1, Hepatocyte Growth factor-Regulated TK Substrate (HRS) family, [Score=55.8, Expect=1e-07]} {Smed: dd_Smed_v6_7922_0_1, dd_Smed_v6_7922_0_1, [Score=311, Expect=1e-93]} {RNA1509_28482, RNA1509_52189} {RNA1310_4737.1, RNA1509_28482, RNA1509_52189} {RNA1509_28482, RNA1509_52189, RNA815_3538} |
| 6. | MligTC455_29353 | 165 | 3.43 | Mlig455_023799 | Neo: - Age: Down-Up-Down |
SLC39A11 | 0.975 | 0.975 | - | - | - | - | - | Mlig455_023799 {REF} {Length: 2864} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=78.9]} {Human: ENSG00000133195, SLC39A11, solute carrier family 39 member 11, [RH, Score=288, Expect=5e-95]; ENSG00000285189, SLC39A11, solute carrier family 39 member 11, [RH, Score=288, Expect=5e-95]} {Mouse: ENSMUSG00000041654, Slc39a11, solute carrier family 39 (metal ion transporter), member 11, [RH, Score=282, Expect=6e-93]} {Dmel: FBgn0033665, Zip48C, Zinc/iron regulated transporter-related protein 48C, [RH, Score=271, Expect=7e-89]} {Celegans: WBGene00019077, zipt-11, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=280, Expect=1e-92]} {RNA1509_16579, RNA1509_45417} {RNA1310_24853, RNA1509_16579, RNA1509_45417} {RNA1509_16579, RNA1509_45417, RNA815_13725} |
| 7. | MligTC455_40705 | 147 | 3.06 | Mlig455_052679 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.574 Region-enriched R5: 2.243/0.01305 |
CCDC174 | 0.971 | 0.971 | - | - | - | - | - | Mlig455_052679 {REF} {Length: 1082} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4078) [PF13300.8, score=45.4]} {Human: ENSG00000154781, CCDC174, coiled-coil domain containing 174, [Score=51.6, Expect=1e-06]} {RNA1509_19175} {RNA1310_28722} {RNA815_14570} |
| 8. | MligTC455_21435 | 37 | 0.77 | Mlig455_016499 | Neo: - Age: - |
RTL1 | 0.97 | 0.970 | - | - | - | - | - | Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816} |
| 9. | MligTC455_13343 | 116 | 2.41 | Mlig455_027742 | Neo: - Age: - |
0.969 | 0.969 | - | - | - | - | - | Mlig455_027742 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_39291} {RNA1310_78357} | |
| 10. | MligTC455_20125 | 45 | 0.94 | Mlig455_016449 | Neo: - Age: Down-Up-Down |
SLC2A1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_016449 {REF} {Length: 4101} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=238.1]; Major Facilitator Superfamily [PF07690.18, score=64.9]} {Human: ENSG00000117394, SLC2A1, solute carrier family 2 member 1, [Score=241, Expect=1e-74]} {Mouse: ENSMUSG00000028645, Slc2a1, solute carrier family 2 (facilitated glucose transporter), member 1, [Score=236, Expect=7e-73]} {Dmel: FBgn0264574, Glut1, Glucose transporter 1, [Score=213, Expect=2e-64]} {Celegans: WBGene00019207, fgt-1, Facilitated glucose transporter protein 1, [Score=207, Expect=6e-62]} {Smed: dd_Smed_v6_4396_0_1, dd_Smed_v6_4396_0_1, [Score=205, Expect=2e-61]} {RNA1509_29953, RNA1509_49862} {RNA1310_18869, RNA1509_49862} {RNA1509_49862, RNA815_4904.1} |
| 11. | MligTC455_35875 | 122 | 2.54 | Mlig455_056460 | Neo: - Age: - |
KY | 0.963 | - | - | - | 0.963 | - | - | Mlig455_056460 {REF} {Length: 1763} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=100, Expect=6e-22]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=100, Expect=4e-22]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=62.8, Expect=3e-10]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=59.3, Expect=3e-09]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=82.8, Expect=1e-16]} {RNA1310_12819} {RNA815_4855} |
| 12. | MligTC455_47624 | 138 | 2.88 | Mlig455_029496 | Neo: - Age: - Regeneration-upregulated BL: 3.356 Regeneration-enriched BL: 3.356 |
0.963 | 0.963 | - | - | - | - | - | Mlig455_029496 {REF} {Length: 2269} {RNA1310_46901} | |
| 13. | MligTC455_36871 | 4132 | 86.08 | Mlig455_061085 | Neo: Irradiation Age: logFC(26M/2M)=0.831 Region-enriched R4: 1.146/0.00083 Regeneration-upregulated BL: 1.165 Regeneration-enriched BL: 1.165 |
H2AFV | 0.959 | - | - | - | - | 0.959 | - | Mlig455_061085 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636} {RNA1310_60280} {RNA815_1839.1} |
| 14. | MligTC455_50877 | 133 | 2.76 | Mlig455_023008 | Neo: - Age: - Regeneration-upregulated BL: 5.778 Regeneration-enriched BL: 5.778 |
0.959 | 0.959 | - | - | - | - | - | Mlig455_023008 {REF} {Length: 819} {TRANSSPLICED} {RNA1310_74407} {RNA815_32847.1} | |
| 15. | MligTC455_17969 | 93 | 1.94 | Mlig455_059890, Mlig455_059897 | Neo: - |
SRSF7 | 0.957 | 0.957 | - | - | - | - | - | Mlig455_059890 {REF} {Length: 1694} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=25.3]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=62.0, Expect=2e-11]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=61.6, Expect=4e-12]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=53.1, Expect=5e-09]} {RNA1509_31420} {RNA1310_17545} {RNA815_17686} Mlig455_059897 {REF} {Length: 482} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=27.0]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [Score=63.2, Expect=7e-12]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [Score=62.8, Expect=1e-12]} {Dmel: FBgn0028554, x16, x16 splicing factor, [Score=46.6, Expect=3e-06]} {Celegans: WBGene00004703, rsp-6, Probable splicing factor, arginine/serine-rich 6, [Score=55.8, Expect=5e-10]} {RNA1509_40725} {RNA1310_38309} {RNA815_29185.1} |
| 16. | MligTC455_33940 | 149 | 3.1 | Mlig455_065104 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.222 Region-enriched R5: 2.287/0.04576 |
GUCY1B1 | 0.956 | 0.956 | - | - | - | - | - | Mlig455_065104 {REF} {Length: 4263} {Pfam: Heme NO binding associated [PF07701.16, score=238.8]; Adenylate and Guanylate cyclase catalytic domain [PF00211.22, score=196.8]; Haem-NO-binding [PF07700.17, score=171.2]} {Human: ENSG00000061918, GUCY1B1, guanylate cyclase 1 soluble subunit beta 1, [Score=343, Expect=8e-105]} {Mouse: ENSMUSG00000021933, Gucy1b2, guanylate cyclase 1, soluble, beta 2, [Score=349, Expect=5e-105]; ENSMUSG00000028005, Gucy1b1, guanylate cyclase 1, soluble, beta 1, [Score=348, Expect=1e-106]} {Dmel: FBgn0038295, Gyc88E, Guanylyl cyclase at 88E, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00001551, gcy-31, Soluble guanylate cyclase gcy-31, [RH, Score=532, Expect=1e-175]} {Smed: dd_Smed_v6_18111_0_1, dd_Smed_v6_18111_0_1, [RH, Score=822, Expect=0.0]} {RNA1509_37818} {RNA1310_7959.2} {RNA815_6599.2} |
| 17. | MligTC455_33362 | 91 | 1.89 | Mlig455_044594 | Neo: - Age: logFC(26M/2M)=-0.300 |
0.954 | 0.954 | - | - | - | - | - | Mlig455_044594 {REF} {Length: 3890} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=46.0]; EF hand [PF00036.34, score=37.3]; EF-hand domain [PF13405.8, score=35.1]; EF hand [PF13202.8, score=25.9]} {RNA1509_5069} {RNA1310_3608.1} {RNA815_1684.1} | |
| 18. | MligTC455_45903 | 74 | 1.54 | Mlig455_045801, Mlig455_063184 | Neo: - Age: - Region-enriched R5: 3.096/0.04909 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_045801 {REF} {Length: 1396} {NoTransDecoderORF} {RNA1509_52997} {RNA1310_78372} {RNA815_50612} Mlig455_063184 {REF} {Length: 2913} {NoTransDecoderORF} {RNA1509_52997} {RNA1310_43363} {RNA815_50612} |
|
| 19. | MligTC455_36870 | 4127 | 85.99 | Mlig455_035433 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 1.158/0.00049 Regeneration-upregulated BL: 1.133 Regeneration-enriched BL: 1.133 |
H2AFV | 0.95 | - | - | - | - | 0.950 | - | Mlig455_035433 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1310_60280, RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1509_18636, RNA1509_4518, RNA1509_6214, RNA815_1839.1} |
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