TomoSeq data search

Data search

Results for MligTC455_13626

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13626	11	0.24	Mlig455_064998	Neo: - Age: -	SSTR5	Mlig455_064998 {REF} {Length: 2126} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=63.1]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=61.2]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=56.2, Expect=7e-08]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=52.8, Expect=6e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=78.2, Expect=6e-15]} {Celegans: WBGene00019496, frpr-14, FMRFamide Peptide Receptor family, [Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_37609_0_1, dd_Smed_v6_37609_0_1, [Score=216, Expect=1e-65]} {RNA1310_73991}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_13626

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_13626

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13626	11	0.24	Mlig455_064998	Neo: - Age: -	SSTR5	1	-	-	-	-	1.000	-	Mlig455_064998 {REF} {Length: 2126} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=63.1]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=61.2]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=56.2, Expect=7e-08]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=52.8, Expect=6e-07]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=78.2, Expect=6e-15]} {Celegans: WBGene00019496, frpr-14, FMRFamide Peptide Receptor family, [Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_37609_0_1, dd_Smed_v6_37609_0_1, [Score=216, Expect=1e-65]} {RNA1310_73991}
2.	MligTC455_13986	12	0.25	Mlig455_025214	Neo: - Age: -	IRX5	0.991	-	-	-	-	0.991	-	Mlig455_025214 {REF} {Length: 2473} {Pfam: Homeobox KN domain [PF05920.13, score=56.2]; Homeodomain [PF00046.31, score=31.8]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=139, Expect=6e-37]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=135, Expect=6e-36]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=136, Expect=5e-36]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=135, Expect=8e-36]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=130, Expect=1e-33]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=130, Expect=4e-34]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=130, Expect=6e-34]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=130, Expect=9e-34]} {Dmel: FBgn0015904, ara, araucan, [Score=133, Expect=2e-34]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=111, Expect=9e-28]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=148, Expect=2e-41]} {RNA1310_51494.1} {RNA815_48813}
3.	MligTC455_06451	5	0.1	Mlig455_024128	Neo: - Age: -		0.982	-	-	-	-	0.982	-	Mlig455_024128 {REF} {Length: 128} {NoTransDecoderORF} {RNA1310_66977}
4.	MligTC455_17773	26	0.53	Mlig455_019102	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.452		0.982	-	-	-	-	0.982	-	Mlig455_019102 {REF} {Length: 1467} {Pfam: Cholesterol uptake porter CUP1 of Mce4, putative [PF11887.10, score=20.7]} {RNA1509_45238} {RNA1310_36939} {RNA815_17399}
5.	MligTC455_20380	13	0.26	Mlig455_013452	Neo: - Age: -	PLSCR4	0.974	-	-	-	-	0.974	-	Mlig455_013452 {REF} {Length: 2157} {Pfam: Scramblase [PF03803.17, score=94.3]} {Human: ENSG00000114698, PLSCR4, phospholipid scramblase 4, [Score=87.4, Expect=1e-18]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=87.0, Expect=1e-18]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [Score=80.1, Expect=1e-16]} {Smed: dd_Smed_v6_4312_0_1, dd_Smed_v6_4312_0_1, [Score=65.5, Expect=4e-12]} {RNA1509_29015} {RNA1310_32034} {RNA815_51815}
6.	MligTC455_50770	48	1.01	Mlig455_044275	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_044275 {REF} {Length: 2754} {Pfam: Innexin [PF00876.20, score=406.3]} {Dmel: FBgn0085387, shakB, shaking B, [Score=120, Expect=1e-29]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=330, Expect=1e-109]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [RH, Score=495, Expect=9e-173]} {RNA1509_20876} {RNA1310_23853} {RNA815_31193}
7.	MligTC455_24108	17	0.35	Mlig455_019116	Neo: - Age: -	KCNK16	0.97	-	-	-	-	0.970	-	Mlig455_019116 {REF} {Length: 1389} {Pfam: Ion channel [PF07885.18, score=118.0]; Ion transport protein [PF00520.33, score=29.1]} {Human: ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=155, Expect=5e-44]} {Mouse: ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [RH, Score=141, Expect=3e-37]} {Dmel: FBgn0037690, Task7, TWIK-related acid-sensitive K[+] channel 7, [Score=110, Expect=3e-27]} {Celegans: WBGene00006696, twk-46, TWiK family of potassium channels, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_9028_0_1, dd_Smed_v6_9028_0_1, [Score=121, Expect=4e-31]} {RNA1310_125949}
8.	MligTC455_09604	34	0.72	Mlig455_056233	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_056233 {REF} {Length: 793} {NoTransDecoderORF}
9.	MligTC455_36872	19	0.4	Mlig455_061959	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_061959 {REF} {Length: 2622} {NoTransDecoderORF} {RNA1509_59554} {RNA1310_76227} {RNA815_9685.1}
10.	MligTC455_27851	7	0.14	Mlig455_025984	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_025984 {REF} {Length: 1377} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=90.2]; HSP20-like domain found in ArsA [PF17886.3, score=29.4]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.8, Expect=1e-09]} {Celegans: WBGene00008592, F08H9.4, [RH, Score=61.2, Expect=2e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=99.8, Expect=2e-24]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766}
11.	MligTC455_07023	32	0.67	Mlig455_018609	Neo: - Age: -	TMEM243	0.956	-	-	-	-	0.956	-	Mlig455_018609 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=53.8]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=64.7, Expect=5e-13]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [Score=49.3, Expect=1e-07]} {RNA1509_52894} {RNA1310_40265} {RNA815_19809}
12.	MligTC455_33538	789	16.45	Mlig455_051129, Mlig455_051205	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.262 Region-specific R2: 4.638 Region-enriched R2: 3.952/0.00052	LRRIQ4	0.953	-	-	-	-	0.953	-	Mlig455_051129 {REF} {Length: 1662} {Pfam: Leucine rich repeat [PF13855.8, score=77.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=61.4]} {Human: ENSG00000188306, LRRIQ4, leucine rich repeats and IQ motif containing 4, [Score=95.5, Expect=6e-21]; ENSG00000240720, LRRD1, leucine rich repeats and death domain containing 1, [Score=93.6, Expect=4e-20]; ENSG00000130224, LRCH2, leucine rich repeats and calponin homology domain containing 2, [Score=93.2, Expect=4e-20]; ENSG00000163827, LRRC2, leucine rich repeat containing 2, [Score=92.4, Expect=2e-20]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=91.7, Expect=2e-19]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=115, Expect=9e-28]} {Dmel: FBgn0033984, Lap1, [Score=86.3, Expect=4e-18]} {Celegans: WBGene00002632, let-413, [Score=90.5, Expect=1e-19]} {Smed: dd_Smed_v6_17742_0_1, dd_Smed_v6_17742_0_1, [RH, Score=360, Expect=1e-124]} {RNA1509_30762} {RNA1310_31301} {RNA815_15435} Mlig455_051205 {REF} {Length: 2514} {Pfam: Leucine rich repeat [PF13855.8, score=72.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.1]} {Human: ENSG00000188306, LRRIQ4, leucine rich repeats and IQ motif containing 4, [Score=94.7, Expect=1e-20]; ENSG00000130224, LRCH2, leucine rich repeats and calponin homology domain containing 2, [Score=93.2, Expect=4e-20]; ENSG00000240720, LRRD1, leucine rich repeats and death domain containing 1, [Score=92.8, Expect=6e-20]; ENSG00000163827, LRRC2, leucine rich repeat containing 2, [Score=92.4, Expect=2e-20]; ENSG00000033122, LRRC7, leucine rich repeat containing 7, [Score=91.3, Expect=3e-19]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=115, Expect=1e-27]} {Dmel: FBgn0033984, Lap1, [Score=85.5, Expect=9e-18]} {Celegans: WBGene00002632, let-413, [Score=90.5, Expect=1e-19]} {Smed: dd_Smed_v6_17742_0_1, dd_Smed_v6_17742_0_1, [RH, Score=362, Expect=2e-125]} {RNA1509_30762} {RNA1310_31301, RNA1509_30762} {RNA1509_30762, RNA815_15435}
13.	MligTC455_50975	173	3.6	Mlig455_014388	Neo: - Age: Down-Up-Up	CHRNB3	0.953	-	-	-	-	0.953	-	Mlig455_014388 {REF} {Length: 1742} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=101.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=23.6]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=110, Expect=4e-26]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=108, Expect=2e-25]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=107, Expect=5e-25]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=106, Expect=7e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=105, Expect=2e-24]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=114, Expect=5e-28]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=107, Expect=2e-25]} {Celegans: WBGene00000955, des-2, Acetylcholine receptor subunit alpha-type des-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_26232_0_1, dd_Smed_v6_26232_0_1, [Score=157, Expect=2e-43]} {RNA1310_54548} {RNA815_33490}
14.	MligTC455_30579	3	0.07	Mlig455_062783	Neo: - Age: Down-Up-Up		0.952	-	-	-	-	0.952	-	Mlig455_062783 {REF} {Length: 2008} {Celegans: WBGene00015646, mlt-10, [Score=171, Expect=5e-45]} {RNA1509_25856} {RNA1310_22909} {RNA815_18032}
15.	MligTC455_34834	126	2.62	Mlig455_036550, Mlig455_057800, Mlig455_057817	Neo: Int S/G2/M Age: -		0.952	-	-	-	-	0.952	-	Mlig455_036550 {REF} {Length: 2962} {RNA1509_42812} {RNA1310_32131} {RNA815_46120} Mlig455_057800 {REF} {Length: 3033} {RNA1509_42812} {RNA1310_32131} {RNA815_46120} Mlig455_057817 {REF} {Length: 2955} {RNA1509_42812} {RNA1310_32131} {RNA815_46120}
16.	MligTC455_09020	15	0.32	Mlig455_000455	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_000455 {REF} {Length: 1010} {NoTransDecoderORF}
17.	MligTC455_11839	17	0.36	Mlig455_024549	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_024549 {REF} {Length: 1820} {NoTransDecoderORF} {RNA1509_48234} {RNA1310_27201.1, RNA1509_48234} {RNA1509_48234, RNA815_41917}
18.	MligTC455_15463	64	1.33	Mlig455_034950	Neo: - Age: -	CALM1	0.951	-	-	-	-	0.951	-	Mlig455_034950 {REF} {Length: 937} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.2]; EF-hand domain [PF14658.8, score=33.0]; EF-hand domain [PF13405.8, score=27.4]; EF hand [PF00036.34, score=20.8]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=92.4, Expect=8e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=92.4, Expect=8e-24]; ENSG00000143933, CALM2, calmodulin 2, [Score=92.4, Expect=8e-24]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=92.4, Expect=5e-24]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=92.4, Expect=5e-24]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=92.4, Expect=5e-24]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=91.3, Expect=2e-23]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=92.0, Expect=7e-24]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=91.7, Expect=6e-24]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=91.7, Expect=5e-24]} {RNA1310_73371}
19.	MligTC455_16842	9	0.18	Mlig455_045522	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_045522 {REF} {Length: 592} {NoTransDecoderORF} {RNA1310_109257}
20.	MligTC455_18332	14	0.28	Mlig455_029709	Neo: - Age: -	FOXD4	0.951	-	-	-	-	0.951	-	Mlig455_029709 {REF} {Length: 1306} {Pfam: Forkhead domain [PF00250.20, score=129.2]} {Human: ENSG00000170122, FOXD4, forkhead box D4, [RH, Score=189, Expect=1e-56]} {Mouse: ENSMUSG00000067261, Foxd3, forkhead box D3, [Score=182, Expect=4e-54]; ENSMUSG00000116152, Foxd3, forkhead box D3, [Score=182, Expect=4e-54]; ENSMUSG00000078302, Foxd1, forkhead box D1, [Score=174, Expect=6e-51]} {Dmel: FBgn0004896, fd59A, forkhead domain 59A, [RH, Score=202, Expect=7e-62]} {Celegans: WBGene00006853, unc-130, [Score=190, Expect=1e-58]} {Smed: dd_Smed_v6_23249_0_1, dd_Smed_v6_23249_0_1, [Score=203, Expect=1e-62]} {RNA1310_78891}