TomoSeq data search

Data search

Results for MligTC455_13722

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13722	93	1.93	Mlig455_039921, Mlig455_041209	Neo: - Age: - Regeneration-upregulated R2: 6.355 Regeneration-enriched R2: 6.355		Mlig455_039921 {REF} {Length: 2452} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_95524.1} {RNA815_48018} Mlig455_041209 {REF} {Length: 3316} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_95524.1} {RNA815_48018}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_13722

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.172	1.842	0.99983	1.00000
RegionR2	-2.485	1.842	0.99973	1.00000
RegionR3	0.156	1.842	0.38521	0.91657
RegionR4	-1.142	1.842	0.99973	1.00000
RegionR5	0.562	1.842	0.24728	0.56160
RegionR6	-2.416	1.842	0.99980	1.00000
RegionR7	2.398	1.842	0.09642	0.59446
RegionR8	2.754	1.842	0.11875	0.63482

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.192	1.842	0.99998	1.00000
RegenerationR2	6.355	1.842	0.00007	0.00944	Specific for R2: 6.355
RegenerationR3	2.88	1.842	0.11217	0.52584
RegenerationR4	4.978	1.842	0.00503	0.09989
RegenerationR5	3.422	1.842	0.02639	0.27684
RegenerationR6	5.183	1.842	0.01076	0.12821
RegenerationBL	3.384	1.842	0.02113	0.15762
RegenerationTP	0.287	1.842	0.87583	1.00000

Genes with expression patterns similar to MligTC455_13722

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13722	93	1.93	Mlig455_039921, Mlig455_041209	Neo: - Age: - Regeneration-upregulated R2: 6.355 Regeneration-enriched R2: 6.355		3	-	-	-	1.000	1.000	1.000	Mlig455_039921 {REF} {Length: 2452} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_95524.1} {RNA815_48018} Mlig455_041209 {REF} {Length: 3316} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=45.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_95524.1} {RNA815_48018}
2.	MligTC455_22184	57	1.18	Mlig455_011505	Neo: - Age: -		1.717	-	-	-	-	0.751	0.966	Mlig455_011505 {REF} {Length: 715} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.4]} {RNA1509_13072} {RNA1310_4523} {RNA815_50872}
3.	MligTC455_13263	119	2.47	Mlig455_055375	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_055375 {REF} {Length: 1937}
4.	MligTC455_39935	46	0.95	Mlig455_068175	Neo: - Age: Up-Down-Down	NPNT	0.968	-	-	-	-	-	0.968	Mlig455_068175 {REF} {Length: 5966} {Pfam: Calcium-binding EGF domain [PF07645.17, score=32.4]; EGF domain [PF12947.9, score=32.4]; TNFR/NGFR cysteine-rich region [PF00020.20, score=31.2]} {Human: ENSG00000168743, NPNT, nephronectin, [Score=55.8, Expect=5e-07]; ENSG00000123146, ADGRE5, adhesion G protein-coupled receptor E5, [Score=55.1, Expect=1e-06]; ENSG00000143341, HMCN1, hemicentin 1, [Score=54.3, Expect=4e-07]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=55.5, Expect=8e-07]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_41535_0_1, dd_Smed_v6_41535_0_1, [Score=119, Expect=3e-27]} {RNA1310_14177} {RNA815_31673}
5.	MligTC455_21230	434	9.03	Mlig455_051602	Neo: - Age: Down-Up-Down	ICMT	0.966	-	-	-	-	0.966	-	Mlig455_051602 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Isoprenylcysteine carboxyl methyltransferase (ICMT) family [PF04140.16, score=92.2]; Phospholipid methyltransferase [PF04191.15, score=27.3]} {Human: ENSG00000116237, ICMT, isoprenylcysteine carboxyl methyltransferase, [Score=194, Expect=1e-60]} {Mouse: ENSMUSG00000039662, Icmt, isoprenylcysteine carboxyl methyltransferase, [Score=194, Expect=1e-60]} {Dmel: FBgn0036336, ste14, isoprenylcysteine carboxylmethyltransferase, [Score=186, Expect=2e-57]} {Celegans: WBGene00017673, icmt-1, Protein-S-isoprenylcysteine O-methyltransferase, [Score=147, Expect=2e-42]} {Smed: dd_Smed_v6_4744_0_1, dd_Smed_v6_4744_0_1, [Score=166, Expect=7e-50]} {RNA1509_16041} {RNA1310_18577.2} {RNA815_8022.2}
6.	MligTC455_05534	53	1.09	Mlig455_022209	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_022209 {REF} {Length: 1138} {NoTransDecoderORF} {RNA1509_30535, RNA1509_33187} {RNA1310_15716.1, RNA1509_30535} {RNA1509_30535, RNA815_44681}
7.	MligTC455_34285	182	3.79	Mlig455_029837	Neo: - Age: - Region-enriched R4: 3.268/0.00673		0.964	-	-	-	-	0.964	-	Mlig455_029837 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: PKC-activated protein phosphatase-1 inhibitor [PF05361.14, score=45.3]} {Dmel: FBgn0032297, CG17124, [RH, Score=85.1, Expect=2e-22]} {Smed: dd_Smed_v6_6245_0_1, dd_Smed_v6_6245_0_1, [RH, Score=81.3, Expect=3e-21]} {RNA1509_28546, RNA1509_37788} {RNA1310_20897, RNA1509_28546, RNA1509_37788} {RNA1509_28546, RNA1509_37788, RNA815_19369.2}
8.	MligTC455_10078	251	5.22	Mlig455_005645, Mlig455_005691	Neo: - Age: - Region-enriched R4: 5.505/0.00346		0.962	-	-	-	-	-	0.962	Mlig455_005645 {REF} {Length: 1477} {Smed: dd_Smed_v6_10422_0_4, dd_Smed_v6_10422_0_4, [Score=47.8, Expect=4e-07]} Mlig455_005691 {REF} {Length: 742} {Smed: dd_Smed_v6_10422_0_4, dd_Smed_v6_10422_0_4, [Score=47.8, Expect=4e-07]}
9.	MligTC455_12302	137	2.85	Mlig455_001240	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_001240 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_35425} {RNA1310_32078} {RNA815_40733}
10.	MligTC455_14690	94	1.96	Mlig455_051489	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.630		0.96	-	-	-	0.960	-	-	Mlig455_051489 {REF} {Length: 1211} {Pfam: Lectin C-type domain [PF00059.23, score=36.1]} {Smed: dd_Smed_v6_84586_0_1, dd_Smed_v6_84586_0_1, [Score=49.7, Expect=6e-08]} {RNA1310_38414.2} {RNA815_44971}
11.	MligTC455_06648	83	1.73	Mlig455_010424	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_010424 {REF} {Length: 1011}
12.	MligTC455_37718	606	12.62	Mlig455_020685, Mlig455_024415, Mlig455_032310, Mlig455_033332, Mlig455_047018, Mlig455_056964	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_020685 {REF} {Length: 2294} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786} Mlig455_024415 {REF} {Length: 2109} {RNA1509_57867} {RNA1310_1374.1} {RNA815_23786} Mlig455_032310 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_21106} {RNA815_43995.2} Mlig455_033332 {REF} {Length: 2377} {RNA1509_57867} {RNA1310_24332} {RNA815_23786} Mlig455_047018 {REF} {Length: 1021} {TRANSSPLICED} {RNA1509_47311} {RNA1310_36606.2} {RNA815_21848} Mlig455_056964 {REF} {Length: 2243} {RNA1509_40552} {RNA1310_1374.1} {RNA815_23786}
13.	MligTC455_48569	31	0.65	Mlig455_066874	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_066874 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1310_59259}
14.	MligTC455_26260	281	5.86	Mlig455_033712	Neo: - Age: Up-Down-Down		0.955	-	-	-	-	-	0.955	Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1}
15.	MligTC455_52845	257	5.35	Mlig455_026037	Neo: Int S/G2/M Age: -	PHF12	0.955	-	-	-	-	0.955	-	Mlig455_026037 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=51.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=92.4, Expect=6e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=91.7, Expect=6e-19]} {Dmel: FBgn0029861, CG3815, [Score=103, Expect=7e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=137, Expect=3e-34]} {RNA1509_39252} {RNA1310_6431} {RNA815_9255}
16.	MligTC455_38701	102	2.13	Mlig455_015653, Mlig455_023761	Neo: - Age: -	ANK1, FPGT-TNNI3K	0.954	-	-	-	-	-	0.954	Mlig455_015653 {REF} {Length: 5454} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=72.8]; Ankyrin repeats (many copies) [PF13857.8, score=71.0]; Ankyrin repeats (many copies) [PF13637.8, score=55.5]; Ankyrin repeat [PF00023.32, score=54.3]; Ankyrin repeat [PF13606.8, score=41.5]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=72.0, Expect=2e-15]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=70.1, Expect=3e-15]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=68.6, Expect=3e-14]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=74.7, Expect=1e-16]} {Dmel: FBgn0261554, CG42672, [Score=63.9, Expect=5e-13]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-18]} {RNA1509_28959} {RNA1310_10537} {RNA815_15195} Mlig455_023761 {REF} {Length: 3109} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.7]; Ankyrin repeat [PF00023.32, score=65.6]; Ankyrin repeats (many copies) [PF13637.8, score=57.1]; Ankyrin repeat [PF13606.8, score=46.0]; Ankyrin repeats (many copies) [PF13857.8, score=45.3]; Mab-21 protein [PF03281.16, score=25.8]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=77.8, Expect=2e-14]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=77.4, Expect=3e-14]; ENSG00000029534, ANK1, ankyrin 1, [Score=75.9, Expect=1e-13]; ENSG00000151150, ANK3, ankyrin 3, [Score=75.1, Expect=2e-13]; ENSG00000085382, HACE1, HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1, [Score=74.7, Expect=2e-13]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=82.4, Expect=5e-16]} {Dmel: FBgn0031473, CG3104, [Score=82.4, Expect=5e-17]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=77.8, Expect=5e-15]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
17.	MligTC455_01224	39	0.82	Mlig455_025513	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_025513 {REF} {Length: 240} {NoTransDecoderORF}
18.	MligTC455_50045	52	1.09	Mlig455_054573	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_054573 {REF} {Length: 2684} {NoTransDecoderORF} {RNA1509_48232} {RNA1310_60087} {RNA815_14770.1}
19.	MligTC455_31903	292	6.08	Mlig455_064011, Mlig455_070707	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_064011 {REF} {Length: 5320} {Pfam: PAS domain [PF13188.9, score=21.4]} {RNA1509_35931} {RNA1310_11597.1} {RNA815_20842.1} Mlig455_070707 {REF} {Length: 3967} {Pfam: PAS domain [PF13188.9, score=21.2]; Lines N-terminus [PF14694.8, score=18.8]} {RNA1509_31473} {RNA1310_51110.1} {RNA815_20842.1}
20.	MligTC455_01799	70	1.46	Mlig455_038552	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_038552 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_6341} {RNA1310_13441.1} {RNA815_5624}