Data search
Results for MligTC455_13730
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13730 | 166 | 3.47 | Mlig455_041786 | Neo: - Age: Down-Up-Down |
PRKAB2 | Mlig455_041786 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=117.7]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=92.2]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=231, Expect=6e-75]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=224, Expect=2e-72]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=231, Expect=7e-75]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=2e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=209, Expect=2e-65]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=206, Expect=1e-65]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=232, Expect=4e-75]} {RNA1509_48490, RNA1509_6248} {RNA1310_8287, RNA1509_48490, RNA1509_6248} {RNA1509_48490, RNA1509_6248, RNA815_7105.1} |
Cumulative graph for MligTC455_13730
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.03 | 2.498 | 0.98974 | 1.00000 | |
| RegionR2 | 0.076 | 2.498 | 0.92570 | 1.00000 | |
| RegionR3 | -0.562 | 2.498 | 0.40249 | 0.93062 | |
| RegionR4 | 0.197 | 2.498 | 0.79344 | 1.00000 | |
| RegionR5 | 0.765 | 2.498 | 0.12608 | 0.35832 | |
| RegionR6 | -0.892 | 2.498 | 0.22840 | 0.81091 | |
| RegionR7 | -0.557 | 2.498 | 0.59906 | 1.00000 | |
| RegionR8 | 0.943 | 2.498 | 0.35600 | 0.99057 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.106 | 2.498 | 0.52067 | 1.00000 | |
| RegenerationR2 | 0.662 | 2.498 | 0.27456 | 0.71967 | |
| RegenerationR3 | 1.636 | 2.498 | 0.02019 | 0.25966 | |
| RegenerationR4 | 0.696 | 2.498 | 0.33671 | 0.76990 | |
| RegenerationR5 | 0.718 | 2.498 | 0.18854 | 0.61859 | |
| RegenerationR6 | 1.853 | 2.498 | 0.01380 | 0.14473 | |
| RegenerationBL | 1.912 | 2.498 | 0.02131 | 0.15837 | |
| RegenerationTP | -0.586 | 2.498 | 0.60691 | 0.96508 |
Genes with expression patterns similar to MligTC455_13730
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13730 | 166 | 3.47 | Mlig455_041786 | Neo: - Age: Down-Up-Down |
PRKAB2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041786 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=117.7]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=92.2]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=231, Expect=6e-75]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=224, Expect=2e-72]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=231, Expect=7e-75]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=2e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=209, Expect=2e-65]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=206, Expect=1e-65]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=232, Expect=4e-75]} {RNA1509_48490, RNA1509_6248} {RNA1310_8287, RNA1509_48490, RNA1509_6248} {RNA1509_48490, RNA1509_6248, RNA815_7105.1} |
| 2. | MligTC455_24536 | 120 | 2.5 | Mlig455_028895 | Neo: - Age: Up-Down-Down |
TRPA1 | 0.985 | - | - | 0.985 | - | - | - | Mlig455_028895 {REF} {Length: 4399} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=276.9]; Ankyrin repeats (many copies) [PF13637.8, score=235.5]; Ankyrin repeats (many copies) [PF13857.8, score=187.3]; Ankyrin repeat [PF00023.32, score=185.3]; Ankyrin repeat [PF13606.8, score=184.2]; Ion transport protein [PF00520.33, score=31.3]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=295, Expect=6e-83]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=277, Expect=4e-77]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=305, Expect=2e-86]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=276, Expect=1e-76]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [RH, Score=551, Expect=2e-178]} {RNA1509_56559} {RNA1310_3837.1} {RNA815_4441} |
| 3. | MligTC455_25487 | 73 | 1.52 | Mlig455_006779 | Neo: - Age: - |
TTC28 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_006779 {REF} {Length: 5941} {Pfam: Tetratricopeptide repeat [PF13424.8, score=84.4]; Tetratricopeptide repeat [PF13176.8, score=56.0]; Tetratricopeptide repeat [PF07719.19, score=55.9]; Tetratricopeptide repeat [PF00515.30, score=48.2]; Tetratricopeptide repeat [PF13181.8, score=43.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=97.4, Expect=2e-19]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=97.8, Expect=9e-20]} {Dmel: FBgn0262719, CG43163, [Score=98.6, Expect=4e-20]} {RNA1509_24017} {RNA1310_15919} {RNA815_6453} |
| 4. | MligTC455_51467 | 156 | 3.24 | Mlig455_069128 | Neo: - |
TRAM1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_069128 {REF} {Length: 2915} {Pfam: TLC domain [PF03798.18, score=73.6]; TRAM1-like protein [PF08390.13, score=68.0]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [RH, Score=307, Expect=5e-102]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [RH, Score=311, Expect=2e-103]} {Dmel: FBgn0040340, TRAM, [RH, Score=229, Expect=8e-72]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [RH, Score=220, Expect=2e-68]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [RH, Score=402, Expect=1e-139]} {RNA1509_14820, RNA1509_2218} {RNA1310_8399, RNA1509_14820} {RNA1509_14820, RNA815_5690} |
| 5. | MligTC455_52891 | 105 | 2.2 | Mlig455_043148 | Neo: - Age: - Region-enriched R4: 5.247/0.01667 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_043148 {REF} {Length: 3889} {TRANSSPLICED} {RNA1509_11726, RNA1509_18968, RNA1509_39744} {RNA1310_13365, RNA1509_11726, RNA1509_39744} {RNA1509_11726, RNA1509_39744, RNA815_4232.1} | |
| 6. | MligTC455_49791 | 599 | 12.47 | Mlig455_024937 | Neo: Neoblast Age: - |
DAP3 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_024937 {REF} {Length: 1925} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=152.7]} {Human: ENSG00000132676, DAP3, death associated protein 3, [RH, Score=223, Expect=2e-68]} {Mouse: ENSMUSG00000068921, Dap3, death associated protein 3, [RH, Score=223, Expect=5e-69]} {Dmel: FBgn0034727, mRpS29, mitochondrial ribosomal protein S29, [RH, Score=177, Expect=3e-51]} {Celegans: WBGene00000933, dap-3, Mammalian cell Death Associated Protein related; Putative uncharacterized protein, [RH, Score=127, Expect=7e-33]} {Smed: dd_Smed_v6_3336_0_1, dd_Smed_v6_3336_0_1, [RH, Score=179, Expect=2e-52]} {RNA1509_18447, RNA1509_21082, RNA1509_30218, RNA1509_39250} {RNA1310_12179, RNA1509_18447, RNA1509_21082, RNA1509_30218, RNA1509_39250} {RNA1509_18447, RNA1509_21082, RNA1509_30218, RNA1509_39250, RNA815_10991} |
| 7. | MligTC455_42917 | 35 | 0.73 | Mlig455_051334 | Neo: - Age: - Region-enriched R2: 5.166/0.02531 |
0.952 | - | - | 0.952 | - | - | - | Mlig455_051334 {REF} {Length: 791} {RNA815_44512} | |
| 8. | MligTC455_21063 | 102 | 2.12 | Mlig455_022767, Mlig455_037745, Mlig455_061950, Mlig455_069920 | Neo: Int S/G2/M Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_022767 {REF} {Length: 1432} {RNA1509_51835} {RNA1310_99393} {RNA815_15908} Mlig455_037745 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_061950 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_069920 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} |
|
| 9. | MligTC455_52264 | 118 | 2.46 | Mlig455_018245 | Neo: - Age: - Region-enriched R5: 1.942/0.04303 |
GIT2 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_018245 {REF} {Length: 5129} {Pfam: G protein-coupled receptor kinase-interacting protein 1 C term [PF12205.10, score=90.3]; Putative GTPase activating protein for Arf [PF01412.20, score=81.5]; Spa2 homology domain (SHD) of GIT [PF08518.13, score=44.2]; Coiled-coil domain-containing protein 106 [PF15794.7, score=19.5]} {Human: ENSG00000139436, GIT2, GIT ArfGAP 2, [RH, Score=328, Expect=4e-99]; ENSG00000108262, GIT1, GIT ArfGAP 1, [RH, Score=324, Expect=4e-97]} {Mouse: ENSMUSG00000041890, Git2, G protein-coupled receptor kinase-interactor 2, [RH, Score=328, Expect=1e-99]; ENSMUSG00000011877, Git1, G protein-coupled receptor kinase-interactor 1, [RH, Score=325, Expect=2e-97]} {Dmel: FBgn0033539, Git, G protein-coupled receptor kinase interacting ArfGAP, [RH, Score=282, Expect=3e-82]} {Celegans: WBGene00008805, git-1, GIT1 (Mammalian G protein-coupled receptor kinase InTeractor 1) homolog, [Score=177, Expect=4e-46]} {Smed: dd_Smed_v6_7569_0_1, dd_Smed_v6_7569_0_1, [RH, Score=327, Expect=1e-97]} {RNA1509_17579} {RNA1310_2666.1, RNA1509_17579} {RNA1509_17579, RNA815_12698} |
| 10. | MligTC455_23918 | 278 | 5.79 | Mlig455_030499 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_030499 {REF} {Length: 1733} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13649.8, score=49.1]; Methyltransferase domain [PF08241.14, score=46.1]; Methyltransferase domain [PF08242.14, score=29.7]; Methyltransferase domain [PF13847.8, score=28.6]; Methyltransferase domain [PF13489.8, score=24.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_45705} | |
| 11. | MligTC455_43832 | 1124 | 23.42 | Mlig455_021852, Mlig455_021927, Mlig455_022019 | Neo: Irradiation Age: logFC(26M/2M)=0.255 Region-enriched R5: 1.315/0.00106 |
RCC1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_021852 {REF} {Length: 3476} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=361, Expect=1e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=363, Expect=2e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=267, Expect=5e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=310, Expect=2e-97]} {RNA1509_16612, RNA1509_36762} {RNA1310_17834, RNA1509_36762} {RNA1509_36762, RNA815_21477} Mlig455_021927 {REF} {Length: 3409} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=232.9]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.8]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=360, Expect=5e-119]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=360, Expect=4e-119]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=268, Expect=3e-82]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=125, Expect=2e-30]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [RH, Score=309, Expect=3e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477} Mlig455_022019 {REF} {Length: 3128} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=229.5]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=84.7]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [RH, Score=363, Expect=9e-120]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [RH, Score=365, Expect=1e-120]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [RH, Score=271, Expect=3e-83]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [Score=127, Expect=5e-31]} {Smed: dd_Smed_v6_4136_0_2, dd_Smed_v6_4136_0_2, [RH, Score=309, Expect=5e-97]} {RNA1509_16612} {RNA1310_17834} {RNA815_21477} |
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