TomoSeq data search

Data search

Results for MligTC455_21063

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_21063	102	2.12	Mlig455_022767, Mlig455_037745, Mlig455_061950, Mlig455_069920	Neo: Int S/G2/M Age: -		Mlig455_022767 {REF} {Length: 1432} {RNA1509_51835} {RNA1310_99393} {RNA815_15908} Mlig455_037745 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_061950 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_069920 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_21063

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.599	2.006	0.76162	1.00000
RegionR2	1.674	2.006	0.13253	0.45205
RegionR3	0.296	2.006	0.67656	1.00000
RegionR4	1.697	2.006	0.08910	0.28447
RegionR5	0.343	2.006	0.62673	0.98045
RegionR6	-1.329	2.006	0.99382	1.00000
RegionR7	0.613	2.006	0.61090	1.00000
RegionR8	-3.894	2.006	0.28209	0.90876

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.245	2.006	0.53738	1.00000
RegenerationR2	-0.252	2.006	0.70308	0.95744
RegenerationR3	0.535	2.006	0.55382	0.88575
RegenerationR4	0.219	2.006	0.79409	0.98485
RegenerationR5	0.008	2.006	0.99160	1.00000
RegenerationR6	2.699	2.006	0.01075	0.12820
RegenerationBL	3.963	2.006	0.00170	0.03249
RegenerationTP	2.351	2.006	0.27532	0.72301

Genes with expression patterns similar to MligTC455_21063

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_21063	102	2.12	Mlig455_022767, Mlig455_037745, Mlig455_061950, Mlig455_069920	Neo: Int S/G2/M Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022767 {REF} {Length: 1432} {RNA1509_51835} {RNA1310_99393} {RNA815_15908} Mlig455_037745 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_061950 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906} Mlig455_069920 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}
2.	MligTC455_33927	430	8.95	Mlig455_067789	Neo: - Age: logFC(26M/2M)=0.724	PPIL2	0.958	-	-	-	0.958	-	-	Mlig455_067789 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=24.8]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=502, Expect=7e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=493, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=513, Expect=1e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=440, Expect=6e-150]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_37397, RNA1509_42813} {RNA1310_15337, RNA1509_37397, RNA1509_42813} {RNA1509_37397, RNA1509_42813, RNA815_4990}
3.	MligTC455_13730	166	3.47	Mlig455_041786	Neo: - Age: Down-Up-Down	PRKAB2	0.951	-	-	0.951	-	-	-	Mlig455_041786 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=117.7]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=92.2]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=231, Expect=6e-75]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=224, Expect=2e-72]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=231, Expect=7e-75]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=2e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=209, Expect=2e-65]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=206, Expect=1e-65]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=232, Expect=4e-75]} {RNA1509_48490, RNA1509_6248} {RNA1310_8287, RNA1509_48490, RNA1509_6248} {RNA1509_48490, RNA1509_6248, RNA815_7105.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_21063

102

2.12

Mlig455_022767, Mlig455_037745, Mlig455_061950, Mlig455_069920

Neo: Int S/G2/M

Age: -

1.000

Mlig455_022767 {REF} {Length: 1432} {RNA1509_51835} {RNA1310_99393} {RNA815_15908}

Mlig455_037745 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

Mlig455_061950 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

Mlig455_069920 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

MligTC455_33927

430

8.95

Mlig455_067789

Neo: -

Age: logFC(26M/2M)=0.724

PPIL2

0.958

Mlig455_067789 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=24.8]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=502, Expect=7e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=493, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=513, Expect=1e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=440, Expect=6e-150]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_37397, RNA1509_42813} {RNA1310_15337, RNA1509_37397, RNA1509_42813} {RNA1509_37397, RNA1509_42813, RNA815_4990}

MligTC455_13730

166

3.47

Mlig455_041786

Neo: -

Age: Down-Up-Down

PRKAB2

0.951

Mlig455_041786 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=117.7]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=92.2]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=231, Expect=6e-75]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=224, Expect=2e-72]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=231, Expect=7e-75]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=2e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=209, Expect=2e-65]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=206, Expect=1e-65]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=232, Expect=4e-75]} {RNA1509_48490, RNA1509_6248} {RNA1310_8287, RNA1509_48490, RNA1509_6248} {RNA1509_48490, RNA1509_6248, RNA815_7105.1}