Data search
Results for MligTC455_13782
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_13782 | 72 | 1.49 | Mlig455_015756 | Neo: - Age: - |
Mlig455_015756 {REF} {Length: 2556} {RNA1310_93699} |
Cumulative graph for MligTC455_13782
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.387 | 1.281 | 0.99855 | 1.00000 | |
| RegionR2 | 0.607 | 1.281 | 0.66171 | 0.99326 | |
| RegionR3 | -1.989 | 1.281 | 1.00000 | 1.00000 | |
| RegionR4 | 2.338 | 1.281 | 0.23533 | 0.52968 | |
| RegionR5 | -1.442 | 1.281 | 0.99914 | 1.00000 | |
| RegionR6 | -0.1 | 1.281 | 0.61227 | 1.00000 | |
| RegionR7 | 2.091 | 1.281 | 0.25771 | 0.88459 | |
| RegionR8 | -1.118 | 1.281 | 0.99806 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.766 | 1.281 | 0.99715 | 1.00000 | |
| RegenerationR2 | 0.101 | 1.281 | 0.88170 | 1.00000 | |
| RegenerationR3 | 2.17 | 1.281 | 0.36017 | 0.77671 | |
| RegenerationR4 | -2.698 | 1.281 | 0.29671 | 0.73894 | |
| RegenerationR5 | 3.248 | 1.281 | 0.19115 | 0.62231 | |
| RegenerationR6 | 3.314 | 1.281 | 0.29609 | 0.64657 | |
| RegenerationBL | 4.174 | 1.281 | 0.12368 | 0.41779 | |
| RegenerationTP | 1.058 | 1.281 | 0.75797 | 1.00000 |
Genes with expression patterns similar to MligTC455_13782
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_13782 | 72 | 1.49 | Mlig455_015756 | Neo: - Age: - |
3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_015756 {REF} {Length: 2556} {RNA1310_93699} | |
| 2. | MligTC455_19780 | 3124 | 65.08 | Mlig455_029145 | Neo: Irradiation Age: Down-Up-Down Regeneration-upregulated BL: 2.116 Regeneration-enriched BL: 2.116 |
CPEB4 | 1.823 | - | - | - | - | 0.962 | 0.861 | Mlig455_029145 {REF} {Length: 3447} {TRANSSPLICED} {Pfam: RNA recognition motif [PF16367.7, score=105.6]; Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=68.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=45.9]} {Human: ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [Score=354, Expect=9e-115]; ENSG00000107864, CPEB3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=2e-109]; ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=2e-109]} {Mouse: ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [Score=355, Expect=2e-115]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=1e-110]} {Dmel: FBgn0264307, orb2, [Score=341, Expect=5e-112]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [Score=234, Expect=7e-71]} {Smed: dd_Smed_v6_8889_0_2, dd_Smed_v6_8889_0_2, [Score=362, Expect=8e-123]} {RNA1509_10206, RNA1509_27985, RNA1509_46969} {RNA1310_3643.1, RNA1509_27985, RNA1509_46969} {RNA1509_27985, RNA1509_46969, RNA815_9479} |
| 3. | MligTC455_42797 | 850 | 17.72 | Mlig455_005346, Mlig455_005462 | Neo: - Age: logFC(26M/2M)=0.238 Region-enriched R8: 2.079/0.01724 |
TRIM56 | 1.674 | - | - | - | - | 0.957 | 0.717 | Mlig455_005346 {REF} {Length: 3200} {Pfam: B-box zinc finger [PF00643.26, score=42.9]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=5e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=129, Expect=6e-31]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=124, Expect=3e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=3e-135]} {RNA1509_47369, RNA1509_51768} {RNA1310_12686.2, RNA1509_47369} {RNA1509_47369, RNA815_8648} Mlig455_005462 {REF} {Length: 3888} {Pfam: B-box zinc finger [PF00643.26, score=42.8]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=7e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=128, Expect=1e-30]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=123, Expect=4e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=5e-135]} {RNA1509_51181, RNA1509_51768} {RNA1310_12686.1, RNA1509_51181, RNA1509_51768} {RNA1509_51181, RNA1509_51768, RNA815_8648} |
| 4. | MligTC455_06832 | 66 | 1.37 | Mlig455_039438 | Neo: - Age: - |
0.974 | - | - | 0.974 | - | - | - | Mlig455_039438 {REF} {Length: 2387} {TRANSSPLICED} {Pfam: Rtr1/RPAP2 family [PF04181.15, score=70.3]} {Mouse: ENSMUSG00000033773, Rpap2, RNA polymerase II associated protein 2, [RH, Score=86.7, Expect=1e-17]} {RNA1509_57444} {RNA1310_19942, RNA1509_57444} {RNA1509_57444, RNA815_14737} | |
| 5. | MligTC455_04561 | 26 | 0.55 | Mlig455_024217 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_024217 {REF} {Length: 523} {NoTransDecoderORF} {RNA1310_66947.1} | |
| 6. | MligTC455_50672 | 130 | 2.7 | Mlig455_026812 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_026812 {REF} {Length: 2408} {RNA1509_58336} {RNA1310_123486, RNA1509_58336} {RNA1509_58336, RNA815_52260} | |
| 7. | MligTC455_01485 | 65 | 1.34 | Mlig455_001469 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_001469 {REF} {Length: 445} | |
| 8. | MligTC455_33355 | 166 | 3.47 | Mlig455_025748, Mlig455_064410 | Neo: - Age: Down-Up-Down |
SP4 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_025748 {REF} {Length: 2231} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=44.8]; C2H2-type zinc finger [PF13894.8, score=29.7]} {Human: ENSG00000105866, SP4, Sp4 transcription factor, [RH, Score=186, Expect=2e-52]; ENSG00000185591, SP1, Sp1 transcription factor, [RH, Score=179, Expect=5e-50]} {Mouse: ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [RH, Score=190, Expect=6e-54]} {Dmel: FBgn0039169, Spps, Sp1-like factor for pairing sensitive-silencing, [RH, Score=174, Expect=4e-48]} {Celegans: WBGene00012735, sptf-3, SP (Specificity Protein) Transcription Factor, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_7824_0_1, dd_Smed_v6_7824_0_1, [RH, Score=171, Expect=1e-49]} {RNA1509_53494} {RNA1310_27619} {RNA815_23917} Mlig455_064410 {REF} {Length: 2233} {Pfam: Zinc-finger double domain [PF13465.8, score=45.8]; Zinc finger, C2H2 type [PF00096.28, score=44.8]; C2H2-type zinc finger [PF13894.8, score=29.7]} {Human: ENSG00000105866, SP4, Sp4 transcription factor, [RH, Score=186, Expect=2e-52]; ENSG00000185591, SP1, Sp1 transcription factor, [RH, Score=179, Expect=5e-50]} {Mouse: ENSMUSG00000025323, Sp4, trans-acting transcription factor 4, [RH, Score=190, Expect=7e-54]} {Dmel: FBgn0039169, Spps, Sp1-like factor for pairing sensitive-silencing, [RH, Score=174, Expect=5e-48]} {Celegans: WBGene00012735, sptf-3, SP (Specificity Protein) Transcription Factor, [RH, Score=155, Expect=1e-43]} {Smed: dd_Smed_v6_7824_0_1, dd_Smed_v6_7824_0_1, [RH, Score=171, Expect=1e-49]} {RNA1509_53494} {RNA1310_27619, RNA1509_53494} {RNA1509_53494, RNA815_23917} |