Data search


search
Exact
Search

Results for MligTC455_42797

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42797 850 17.72 Mlig455_005346, Mlig455_005462

Neo: -

Age: logFC(26M/2M)=0.238

Region-enriched R8: 2.079/0.01724

TRIM56

Mlig455_005346 {REF} {Length: 3200} {Pfam: B-box zinc finger [PF00643.26, score=42.9]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=5e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=129, Expect=6e-31]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=124, Expect=3e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=3e-135]} {RNA1509_47369, RNA1509_51768} {RNA1310_12686.2, RNA1509_47369} {RNA1509_47369, RNA815_8648}

Mlig455_005462 {REF} {Length: 3888} {Pfam: B-box zinc finger [PF00643.26, score=42.8]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=7e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=128, Expect=1e-30]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=123, Expect=4e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=5e-135]} {RNA1509_51181, RNA1509_51768} {RNA1310_12686.1, RNA1509_51181, RNA1509_51768} {RNA1509_51181, RNA1509_51768, RNA815_8648}

Cumulative graph for MligTC455_42797

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.532 4.22 0.71107 1.00000
RegionR2 -0.099 4.22 0.87071 1.00000
RegionR3 -0.734 4.22 0.17604 0.70417
RegionR4 0.125 4.22 0.84366 1.00000
RegionR5 -0.49 4.22 0.35169 0.70143
RegionR6 0.157 4.22 0.75356 1.00000
RegionR7 -0.506 4.22 0.46493 1.00000
RegionR8 2.079 4.22 0.00026 0.01724

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.173 4.22 0.22230 0.95604
RegenerationR2 0.132 4.22 0.80759 0.99242
RegenerationR3 0.65 4.22 0.30044 0.73191
RegenerationR4 0.706 4.22 0.24626 0.69431
RegenerationR5 0.619 4.22 0.28877 0.71698
RegenerationR6 1.267 4.22 0.02847 0.21057
RegenerationBL 1.601 4.22 0.00157 0.03085
RegenerationTP 0.996 4.22 0.09627 0.48555


Genes with expression patterns similar to MligTC455_42797

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42797 850 17.72 Mlig455_005346, Mlig455_005462

Neo: -

Age: logFC(26M/2M)=0.238

Region-enriched R8: 2.079/0.01724

TRIM56 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_005346 {REF} {Length: 3200} {Pfam: B-box zinc finger [PF00643.26, score=42.9]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=5e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=129, Expect=6e-31]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=124, Expect=3e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=3e-135]} {RNA1509_47369, RNA1509_51768} {RNA1310_12686.2, RNA1509_47369} {RNA1509_47369, RNA815_8648}

Mlig455_005462 {REF} {Length: 3888} {Pfam: B-box zinc finger [PF00643.26, score=42.8]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=7e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=128, Expect=1e-30]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=123, Expect=4e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=5e-135]} {RNA1509_51181, RNA1509_51768} {RNA1310_12686.1, RNA1509_51181, RNA1509_51768} {RNA1509_51181, RNA1509_51768, RNA815_8648}
2. MligTC455_35645 3253 67.78 Mlig455_067468

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.385

Region-enriched R7: 1.801/0.00002

CALR 2.752 - - - 0.972 0.903 0.877 Mlig455_067468 {REF} {Length: 3017} {Pfam: Calreticulin family [PF00262.20, score=288.0]} {Human: ENSG00000179218, CALR, calreticulin, [RH, Score=498, Expect=6e-176]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [RH, Score=498, Expect=6e-176]} {Dmel: FBgn0005585, Calr, Calreticulin, [RH, Score=498, Expect=3e-176]} {Celegans: WBGene00000802, crt-1, Calreticulin, [RH, Score=468, Expect=7e-165]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [RH, Score=558, Expect=0.0]} {RNA1509_5040} {RNA1310_10824.1, RNA1509_5040} {RNA1509_5040, RNA815_3782.1}
3. MligTC455_18192 3456 71.99 Mlig455_023397

Neo: -

Age: -

Region-enriched R7: 1.515/0.00121
Region-enriched R2: 1.470/0.00610

2.664 - - 0.830 0.964 - 0.870 Mlig455_023397 {REF} {Length: 1452} {RNA1509_4681} {RNA1310_27199, RNA1509_4681} {RNA1509_4681, RNA815_12209}
4. MligTC455_23517 847 17.64 Mlig455_027857

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.877

Region-enriched R8: 5.900/0.00000
Region-enriched R7: 4.915/0.00000

TLL1 1.881 - - - 0.920 - 0.961 Mlig455_027857 {REF} {Length: 1443} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=138.1]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=95.9, Expect=7e-22]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=94.7, Expect=4e-21]} {Dmel: FBgn0037395, CG10280, [Score=102, Expect=1e-24]} {Celegans: WBGene00003534, nas-15, Zinc metalloproteinase nas-15, [Score=119, Expect=6e-30]} {Smed: dd_Smed_v6_345_0_1, dd_Smed_v6_345_0_1, [RH, Score=124, Expect=7e-34]} {RNA1509_35571} {RNA1310_3360.1} {RNA815_11450}
5. MligTC455_32308 616 12.84 Mlig455_050858

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.186/0.00970

1.879 - - - 0.962 - 0.917 Mlig455_050858 {REF} {Length: 9789} {Pfam: Mucin-like glycoprotein [PF01456.19, score=24.1]} {RNA1509_37922} {RNA1310_501.1} {RNA815_49.1}
6. MligTC455_10090 15720 327.5 Mlig455_062864, Mlig455_062948, Mlig455_067046, Mlig455_067087

Neo: Irradiation

Age: -

Regeneration-enriched BL: 1.850
Regeneration-enriched TP: 1.722

1.847 - - - 0.877 - 0.970

Mlig455_062864 {REF} {Length: 825} {Pfam: Thymosin beta-4 family [PF01290.22, score=61.4]} {Dmel: FBgn0026084, cib, ciboulot, [Score=50.1, Expect=5e-09]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [Score=57.8, Expect=9e-13]} {RNA1509_51100} {RNA1310_47415} {RNA815_21940}

Mlig455_062948 {REF} {Length: 659} {Pfam: Thymosin beta-4 family [PF01290.22, score=61.5]} {Dmel: FBgn0026084, cib, ciboulot, [Score=53.9, Expect=2e-10]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=58.5, Expect=1e-12]} {RNA1509_20485} {RNA1310_42819} {RNA815_21940}

Mlig455_067046 {REF} {Length: 828} {Pfam: Thymosin beta-4 family [PF01290.22, score=61.4]} {Dmel: FBgn0026084, cib, ciboulot, [Score=50.1, Expect=5e-09]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [Score=57.8, Expect=9e-13]} {RNA1509_14283, RNA1509_51100} {RNA1310_47415, RNA1509_14283} {RNA1509_14283, RNA815_21940}

Mlig455_067087 {REF} {Length: 886} {Pfam: Thymosin beta-4 family [PF01290.22, score=61.4]} {Dmel: FBgn0026084, cib, ciboulot, [Score=50.1, Expect=4e-09]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [Score=57.4, Expect=1e-12]} {RNA1509_20485, RNA1509_45010, RNA1509_46810, RNA1509_51100} {RNA1310_47415, RNA1509_20485, RNA1509_45010, RNA1509_46810, RNA1509_51100} {RNA1509_20485, RNA1509_45010, RNA1509_46810, RNA1509_51100, RNA815_21940}
7. MligTC455_37916 1391 28.98 Mlig455_068757

Neo: -

Age: -

DNAJC3 1.836 - - - 0.958 0.878 - Mlig455_068757 {REF} {Length: 5115} {Pfam: Tetratricopeptide repeat [PF00515.30, score=127.1]; Tetratricopeptide repeat [PF07719.19, score=109.6]; TPR repeat [PF13414.8, score=99.6]; Tetratricopeptide repeat [PF13181.8, score=90.8]; Tetratricopeptide repeat [PF14559.8, score=81.7]; DnaJ domain [PF00226.33, score=75.0]; Tetratricopeptide repeat [PF13431.8, score=70.6]; Tetratricopeptide repeat [PF13428.8, score=68.2]; Tetratricopeptide repeat [PF13432.8, score=66.3]; Tetratricopeptide repeat [PF13371.8, score=64.4]; Tetratricopeptide repeat [PF13424.8, score=50.4]; Tetratricopeptide repeat [PF13174.8, score=41.6]; Alkyl sulfatase dimerisation [PF14863.8, score=29.7]; Tetratricopeptide repeat [PF13176.8, score=28.5]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=27.9]; Tetratricopeptide repeat [PF14561.8, score=27.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.4]; Tetratricopeptide repeat [PF13374.8, score=21.6]} {Human: ENSG00000102580, DNAJC3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=410, Expect=8e-139]} {Mouse: ENSMUSG00000022136, Dnajc3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=405, Expect=5e-137]} {Dmel: FBgn0037718, P58IPK, [RH, Score=382, Expect=7e-128]} {Celegans: WBGene00001025, dnj-7, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=352, Expect=1e-116]} {Smed: dd_Smed_v6_4016_0_1, dd_Smed_v6_4016_0_1, [RH, Score=462, Expect=5e-160]} {RNA1509_43673, RNA1509_4903} {RNA1310_4191.1, RNA1509_43673, RNA1509_4903} {RNA1509_43673, RNA1509_4903, RNA815_4472}
8. MligTC455_33795 252 5.26 Mlig455_060633

Neo: -

Age: -

Region-enriched R8: 3.037/0.04043

CNFN 1.767 - - - 0.805 - 0.962 Mlig455_060633 {REF} {Length: 1246} {Pfam: PLAC8 family [PF04749.19, score=60.7]} {Human: ENSG00000105427, CNFN, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [RH, Score=70.9, Expect=2e-16]} {Smed: dd_Smed_v6_3182_0_1, dd_Smed_v6_3182_0_1, [RH, Score=85.1, Expect=3e-22]} {RNA1509_9786} {RNA1310_42064} {RNA815_27081}
9. MligTC455_44519 289 6.01 Mlig455_044327

Neo: -

Age: -

BNC2 1.753 - - - 0.969 0.784 - Mlig455_044327 {REF} {Length: 3741} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3512) [PF12024.10, score=56.1]; C2H2-type zinc finger [PF13894.8, score=21.9]} {Human: ENSG00000173068, BNC2, basonuclin 2, [Score=82.0, Expect=1e-15]; ENSG00000169594, BNC1, basonuclin 1, [Score=80.5, Expect=3e-15]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [Score=82.4, Expect=8e-16]; ENSMUSG00000025105, Bnc1, basonuclin 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0285879, disco-r, disco-related, [Score=63.9, Expect=3e-10]} {Celegans: WBGene00007256, swsn-9, SWI/SNF nucleosome remodeling complex component, [Score=52.0, Expect=8e-07]} {Smed: dd_Smed_v6_8872_0_1, dd_Smed_v6_8872_0_1, [RH, Score=66.2, Expect=3e-11]} {RNA1509_19621} {RNA1310_14638, RNA1509_19621} {RNA1509_19621, RNA815_16614}
10. MligTC455_13782 72 1.49 Mlig455_015756

Neo: -

Age: -

1.674 - - - - 0.957 0.717 Mlig455_015756 {REF} {Length: 2556} {RNA1310_93699}
11. MligTC455_48402 634 13.21 Mlig455_030570

Neo: -

Age: -

GNG7 1.663 - - 0.710 - - 0.953 Mlig455_030570 {REF} {Length: 3661} {Pfam: GGL domain [PF00631.24, score=54.6]} {Human: ENSG00000176533, GNG7, G protein subunit gamma 7, [RH, Score=61.6, Expect=4e-14]} {Mouse: ENSMUSG00000048240, Gng7, guanine nucleotide binding protein (G protein), gamma 7, [RH, Score=59.7, Expect=2e-13]; ENSMUSG00000036402, Gng12, guanine nucleotide binding protein (G protein), gamma 12, [RH, Score=58.5, Expect=4e-13]} {Dmel: FBgn0004921, Ggamma1, G protein gamma 1, [RH, Score=68.2, Expect=5e-17]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [Score=50.8, Expect=2e-10]} {Smed: dd_Smed_v6_1237_0_1, dd_Smed_v6_1237_0_1, [Score=68.6, Expect=2e-17]} {RNA1509_51198, RNA1509_55683} {RNA1310_34893, RNA1509_51198, RNA1509_55683} {RNA1509_51198, RNA1509_55683, RNA815_16453.1}
12. MligTC455_23015 246 5.13 Mlig455_044423

Neo: -

Age: -

ACTR10 0.979 - - - 0.979 - - Mlig455_044423 {REF} {Length: 2401} {Pfam: Actin [PF00022.21, score=165.6]} {Human: ENSG00000131966, ACTR10, actin related protein 10 homolog, [RH, Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000021076, Actr10, ARP10 actin-related protein 10, [RH, Score=333, Expect=4e-111]} {Dmel: FBgn0031050, Arp10, Actin-related protein 10, [RH, Score=270, Expect=3e-87]} {Celegans: WBGene00016793, arp-11, Actin-Related Proteins, [RH, Score=139, Expect=3e-37]} {Smed: dd_Smed_v6_2141_0_3, dd_Smed_v6_2141_0_3, [RH, Score=276, Expect=3e-89]} {RNA1509_14893} {RNA1310_14286} {RNA815_22726}
13. MligTC455_37915 2537 52.85 Mlig455_015329, Mlig455_015373

Neo: -

Age: -

DNAJC3 0.972 - - - 0.972 - -

Mlig455_015329 {REF} {Length: 4407} {Pfam: Tetratricopeptide repeat [PF00515.30, score=127.1]; Tetratricopeptide repeat [PF07719.19, score=109.6]; TPR repeat [PF13414.8, score=99.6]; Tetratricopeptide repeat [PF13181.8, score=90.8]; Tetratricopeptide repeat [PF14559.8, score=81.7]; DnaJ domain [PF00226.33, score=75.0]; Tetratricopeptide repeat [PF13431.8, score=70.6]; Tetratricopeptide repeat [PF13428.8, score=68.2]; Tetratricopeptide repeat [PF13432.8, score=66.3]; Tetratricopeptide repeat [PF13371.8, score=64.4]; Tetratricopeptide repeat [PF13424.8, score=50.4]; Tetratricopeptide repeat [PF13174.8, score=41.6]; Alkyl sulfatase dimerisation [PF14863.8, score=29.7]; Tetratricopeptide repeat [PF13176.8, score=28.5]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=27.9]; Tetratricopeptide repeat [PF14561.8, score=27.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.4]; Tetratricopeptide repeat [PF13374.8, score=21.6]} {Human: ENSG00000102580, DNAJC3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=410, Expect=8e-139]} {Mouse: ENSMUSG00000022136, Dnajc3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=405, Expect=5e-137]} {Dmel: FBgn0037718, P58IPK, [RH, Score=382, Expect=7e-128]} {Celegans: WBGene00001025, dnj-7, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=352, Expect=1e-116]} {Smed: dd_Smed_v6_4016_0_1, dd_Smed_v6_4016_0_1, [RH, Score=462, Expect=5e-160]} {RNA1509_43673} {RNA1310_11637.1} {RNA815_4472}

Mlig455_015373 {REF} {Length: 5626} {Pfam: Tetratricopeptide repeat [PF00515.30, score=127.1]; Tetratricopeptide repeat [PF07719.19, score=109.6]; TPR repeat [PF13414.8, score=99.6]; Tetratricopeptide repeat [PF13181.8, score=90.8]; Tetratricopeptide repeat [PF14559.8, score=81.6]; DnaJ domain [PF00226.33, score=75.0]; Tetratricopeptide repeat [PF13431.8, score=70.6]; Tetratricopeptide repeat [PF13428.8, score=68.8]; Tetratricopeptide repeat [PF13432.8, score=66.3]; Tetratricopeptide repeat [PF13371.8, score=64.3]; Tetratricopeptide repeat [PF13424.8, score=50.5]; Tetratricopeptide repeat [PF13174.8, score=42.4]; Tetratricopeptide repeat [PF13176.8, score=28.5]; Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=27.9]; Alkyl sulfatase dimerisation [PF14863.8, score=27.1]; Tetratricopeptide repeat [PF14561.8, score=27.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=23.4]; Tetratricopeptide repeat [PF13374.8, score=21.6]} {Human: ENSG00000102580, DNAJC3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=410, Expect=2e-138]} {Mouse: ENSMUSG00000022136, Dnajc3, DnaJ heat shock protein family (Hsp40) member C3, [RH, Score=404, Expect=1e-136]} {Dmel: FBgn0037718, P58IPK, [RH, Score=380, Expect=2e-127]} {Celegans: WBGene00001025, dnj-7, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=350, Expect=5e-116]} {Smed: dd_Smed_v6_4016_0_1, dd_Smed_v6_4016_0_1, [RH, Score=461, Expect=2e-159]} {RNA1509_4903} {RNA1310_4191.1} {RNA815_4472}
14. MligTC455_30919 296 6.16 Mlig455_027919

Neo: -

Age: -

TNN 0.971 0.971 - - - - - Mlig455_027919 {REF} {Length: 2245} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=79.7]} {Human: ENSG00000120332, TNN, tenascin N, [Score=68.2, Expect=1e-11]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=66.2, Expect=3e-11]; ENSMUSG00000015829, Tnr, tenascin R, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0031804, CG9500, [Score=81.3, Expect=4e-17]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=68.9, Expect=2e-12]} {RNA1509_53291} {RNA1310_21728} {RNA815_9881}
15. MligTC455_18600 1028 21.43 Mlig455_009405, Mlig455_036920

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.447

FHL2 0.966 - - - 0.966 - -

Mlig455_009405 {REF} {Length: 2455} {Pfam: LIM domain [PF00412.24, score=149.5]} {Human: ENSG00000115641, FHL2, four and a half LIM domains 2, [RH, Score=343, Expect=2e-117]} {Mouse: ENSMUSG00000008136, Fhl2, four and a half LIM domains 2, [RH, Score=340, Expect=4e-118]} {Dmel: FBgn0261565, Lmpt, Limpet, [RH, Score=367, Expect=1e-128]} {Celegans: WBGene00006407, lim-9, LIM domain family; LIM-9 isoform, [Score=384, Expect=3e-135]} {Smed: dd_Smed_v6_5037_0_1, dd_Smed_v6_5037_0_1, [Score=451, Expect=3e-162]} {RNA1509_22765} {RNA1310_19774, RNA1509_22765} {RNA1509_22765, RNA815_9696}

Mlig455_036920 {REF} {Length: 2451} {Pfam: LIM domain [PF00412.24, score=149.5]} {Human: ENSG00000115641, FHL2, four and a half LIM domains 2, [RH, Score=343, Expect=2e-117]} {Mouse: ENSMUSG00000008136, Fhl2, four and a half LIM domains 2, [RH, Score=340, Expect=4e-118]} {Dmel: FBgn0261565, Lmpt, Limpet, [RH, Score=367, Expect=1e-128]} {Celegans: WBGene00006407, lim-9, LIM domain family; LIM-9 isoform, [Score=384, Expect=3e-135]} {Smed: dd_Smed_v6_5037_0_1, dd_Smed_v6_5037_0_1, [Score=451, Expect=3e-162]} {RNA1509_22765} {RNA1310_19774} {RNA815_9696}
16. MligTC455_45897 33 0.69 Mlig455_008231

Neo: -

Age: -

ANGPTL2 0.964 - - - - 0.964 - Mlig455_008231 {REF} {Length: 925} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=151.2]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=131, Expect=4e-35]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=130, Expect=7e-35]; ENSG00000130812, ANGPTL6, angiopoietin like 6, [Score=125, Expect=7e-33]} {Mouse: ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=131, Expect=3e-35]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=130, Expect=6e-35]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=128, Expect=3e-34]} {Dmel: FBgn0034160, CG5550, [Score=108, Expect=9e-29]} {RNA1509_26827} {RNA1310_66248} {RNA815_17173.1}
17. MligTC455_16424 67 1.39 Mlig455_024445

Neo: -

Age: -

0.961 - - - - - 0.961 Mlig455_024445 {REF} {Length: 1753} {RNA1509_36146} {RNA1310_8090.1} {RNA815_131.5}
18. MligTC455_12629 951 19.8 Mlig455_043309, Mlig455_050783

Neo: Int S/G2/M

Age: -

PYM1 0.955 - - - 0.955 - -

Mlig455_043309 {REF} {Length: 931} {TRANSSPLICED} {RNA1509_11277} {RNA1310_35377} {RNA815_52042}

Mlig455_050783 {REF} {Length: 1659} {TRANSSPLICED} {Pfam: Mago binding [PF09282.12, score=55.1]} {Human: ENSG00000170473, PYM1, PYM homolog 1, exon junction complex associated factor, [RH, Score=55.8, Expect=5e-09]} {Mouse: ENSMUSG00000064030, Pym1, PYM homolog 1, exon junction complex associated factor, [RH, Score=72.4, Expect=4e-15]} {Dmel: FBgn0034918, Pym, Partner of Y14 and Mago, [RH, Score=75.9, Expect=2e-16]} {Celegans: WBGene00011871, T20G5.9, [RH, Score=50.8, Expect=7e-08]} {Smed: dd_Smed_v6_13511_0_1, dd_Smed_v6_13511_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1509_11277} {RNA1310_41808, RNA1509_11277} {RNA1509_11277, RNA815_14043.1}
19. MligTC455_17359 134 2.8 Mlig455_062472

Neo: -

Age: -

0.954 - - - 0.954 - - Mlig455_062472 {REF} {Length: 1761} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_27456} {RNA1310_16614} {RNA815_12658}
20. MligTC455_35499 52 1.08 Mlig455_016299, Mlig455_038116

Neo: -

Age: -

ZC4H2, ZNF362 0.954 - - - - - 0.954

Mlig455_016299 {REF} {Length: 1855} {Pfam: Zinc finger-containing protein [PF10146.11, score=183.1]; Autophagy protein 16 (ATG16) [PF08614.13, score=25.4]} {Human: ENSG00000126970, ZC4H2, zinc finger C4H2-type containing, [RH, Score=96.3, Expect=2e-22]} {Mouse: ENSMUSG00000035062, Zc4h2, zinc finger, C4H2 domain containing, [RH, Score=96.3, Expect=1e-22]} {Dmel: FBgn0030806, CG13001, [RH, Score=75.9, Expect=6e-15]} {Celegans: WBGene00014153, vab-23, [RH, Score=79.7, Expect=9e-17]} {Smed: dd_Smed_v6_6954_0_1, dd_Smed_v6_6954_0_1, [RH, Score=71.2, Expect=1e-13]} {RNA1310_19213} {RNA815_45611}

Mlig455_038116 {REF} {Length: 2149} {Pfam: Zinc-finger double domain [PF13465.8, score=72.9]; Anti-sigma-K factor rskA [PF10099.11, score=45.5]; Zinc finger, C2H2 type [PF00096.28, score=35.1]; C2H2-type zinc finger [PF13912.8, score=26.6]; C2H2-type zinc finger [PF13894.8, score=19.6]} {Human: ENSG00000160094, ZNF362, zinc finger protein 362, [Score=179, Expect=3e-50]; ENSG00000126746, ZNF384, zinc finger protein 384, [Score=175, Expect=1e-47]} {Mouse: ENSMUSG00000028799, Zfp362, zinc finger protein 362, [Score=179, Expect=2e-50]; ENSMUSG00000038346, Zfp384, zinc finger protein 384, [Score=175, Expect=9e-48]} {Dmel: FBgn0267337, rn, rotund, [RH, Score=188, Expect=7e-51]} {Celegans: WBGene00003015, lin-29, Transcription factor, [RH, Score=168, Expect=5e-46]} {Smed: dd_Smed_v6_18940_0_1, dd_Smed_v6_18940_0_1, [RH, Score=304, Expect=5e-95]} {RNA1509_19836} {RNA1310_91821} {RNA815_11624.2}
21. MligTC455_07945 60 1.25 Mlig455_020568, Mlig455_044520

Neo: -

Age: -

HES1 0.952 - - - - - 0.952

Mlig455_020568 {REF} {Length: 914} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.2]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=65.9, Expect=8e-13]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=65.5, Expect=7e-13]} {Dmel: FBgn0002735, E(spl)mgamma-HLH, Enhancer of split mgamma, helix-loop-helix, [RH, Score=70.9, Expect=2e-15]} {Celegans: WBGene00003008, lin-22, Lin-22, [RH, Score=55.8, Expect=3e-10]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [RH, Score=52.8, Expect=6e-09]} {RNA1310_141742}

Mlig455_044520 {REF} {Length: 913} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.2]} {Human: ENSG00000114315, HES1, hes family bHLH transcription factor 1, [Score=64.3, Expect=4e-12]} {Mouse: ENSMUSG00000022528, Hes1, hes family bHLH transcription factor 1, [Score=63.9, Expect=3e-12]} {Dmel: FBgn0002735, E(spl)mgamma-HLH, Enhancer of split mgamma, helix-loop-helix, [RH, Score=68.6, Expect=2e-14]} {Celegans: WBGene00003008, lin-22, Lin-22, [RH, Score=56.2, Expect=3e-10]} {Smed: dd_Smed_v6_17332_0_1, dd_Smed_v6_17332_0_1, [Score=48.1, Expect=3e-07]} {RNA1310_141742}
22. MligTC455_24785 153 3.18 Mlig455_047171

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.332

RAC1 0.952 - - - - - 0.952 Mlig455_047171 {REF} {Length: 3506} {Pfam: Ras family [PF00071.24, score=209.2]; Caspase domain [PF00656.24, score=103.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=94.3]; Domain of unknown function (DUF4744) [PF15918.7, score=22.2]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=195, Expect=8e-57]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=189, Expect=1e-54]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=189, Expect=1e-54]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=195, Expect=6e-57]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=191, Expect=3e-55]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=189, Expect=7e-55]} {Dmel: FBgn0010333, Rac1, [Score=191, Expect=1e-55]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=188, Expect=1e-54]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=177, Expect=7e-51]} {RNA1509_36687} {RNA1310_6414} {RNA815_5614.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA