TomoSeq data search

Data search

Results for MligTC455_14182

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14182

150

3.13

Mlig455_003006, Mlig455_036415

Neo: -

Age: -

Region-enriched R6: 2.786/0.02716

KCNJ12

Mlig455_003006 {REF} {Length: 3092} {Pfam: Inward rectifier potassium channel C-terminal domain [PF17655.3, score=231.8]; Inward rectifier potassium channel transmembrane domain [PF01007.22, score=196.1]; Ion channel [PF07885.18, score=19.6]} {Human: ENSG00000184185, KCNJ12, potassium voltage-gated channel subfamily J member 12, [RH, Score=379, Expect=5e-128]; ENSG00000260458, KCNJ18, potassium voltage-gated channel subfamily J member 18, [RH, Score=375, Expect=1e-126]; ENSG00000157542, KCNJ6, potassium voltage-gated channel subfamily J member 6, [RH, Score=370, Expect=9e-125]} {Mouse: ENSMUSG00000042529, Kcnj12, potassium inwardly-rectifying channel, subfamily J, member 12, [RH, Score=380, Expect=2e-127]; ENSMUSG00000043301, Kcnj6, potassium inwardly-rectifying channel, subfamily J, member 6, [RH, Score=370, Expect=4e-125]} {Dmel: FBgn0265042, Irk1, Inwardly rectifying potassium channel 1, [RH, Score=405, Expect=4e-137]} {Celegans: WBGene00002150, irk-2, Inward Rectifying K (Potassium) channel family, [RH, Score=384, Expect=4e-130]} {RNA1509_51986} {RNA1310_33919} {RNA815_28373}

Mlig455_036415 {REF} {Length: 3049} {Pfam: Inward rectifier potassium channel C-terminal domain [PF17655.3, score=231.8]; Inward rectifier potassium channel transmembrane domain [PF01007.22, score=196.1]; Ion channel [PF07885.18, score=19.6]} {Human: ENSG00000184185, KCNJ12, potassium voltage-gated channel subfamily J member 12, [RH, Score=379, Expect=4e-128]; ENSG00000260458, KCNJ18, potassium voltage-gated channel subfamily J member 18, [RH, Score=375, Expect=7e-127]; ENSG00000157542, KCNJ6, potassium voltage-gated channel subfamily J member 6, [RH, Score=372, Expect=1e-125]} {Mouse: ENSMUSG00000042529, Kcnj12, potassium inwardly-rectifying channel, subfamily J, member 12, [RH, Score=380, Expect=1e-127]; ENSMUSG00000043301, Kcnj6, potassium inwardly-rectifying channel, subfamily J, member 6, [RH, Score=372, Expect=9e-126]} {Dmel: FBgn0265042, Irk1, Inwardly rectifying potassium channel 1, [RH, Score=406, Expect=4e-136]} {Celegans: WBGene00002150, irk-2, Inward Rectifying K (Potassium) channel family, [RH, Score=385, Expect=2e-130]} {RNA1509_23312} {RNA1310_33919} {RNA815_28373}

Cumulative graph for MligTC455_14182

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.034	2.128	0.30029	0.94957
RegionR2	1.519	2.128	0.18952	0.54463
RegionR3	-0.12	2.128	0.89605	1.00000
RegionR4	-1.236	2.128	0.99405	1.00000
RegionR5	0.115	2.128	0.81636	1.00000
RegionR6	2.786	2.128	0.00059	0.02716
RegionR7	-0.395	2.128	0.94760	1.00000
RegionR8	2.366	2.128	0.06671	0.49771

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.321	2.128	0.99998	1.00000
RegenerationR2	0.595	2.128	0.42613	0.83201
RegenerationR3	-0.558	2.128	0.59380	0.90538
RegenerationR4	0.15	2.128	0.86212	1.00000
RegenerationR5	0.277	2.128	0.74968	0.97188
RegenerationR6	-0.993	2.128	0.17437	0.50686
RegenerationBL	0.499	2.128	0.58357	0.93500
RegenerationTP	0.253	2.128	0.82151	1.00000

Genes with expression patterns similar to MligTC455_14182

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14182	150	3.13	Mlig455_003006, Mlig455_036415	Neo: - Age: - Region-enriched R6: 2.786/0.02716	KCNJ12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003006 {REF} {Length: 3092} {Pfam: Inward rectifier potassium channel C-terminal domain [PF17655.3, score=231.8]; Inward rectifier potassium channel transmembrane domain [PF01007.22, score=196.1]; Ion channel [PF07885.18, score=19.6]} {Human: ENSG00000184185, KCNJ12, potassium voltage-gated channel subfamily J member 12, [RH, Score=379, Expect=5e-128]; ENSG00000260458, KCNJ18, potassium voltage-gated channel subfamily J member 18, [RH, Score=375, Expect=1e-126]; ENSG00000157542, KCNJ6, potassium voltage-gated channel subfamily J member 6, [RH, Score=370, Expect=9e-125]} {Mouse: ENSMUSG00000042529, Kcnj12, potassium inwardly-rectifying channel, subfamily J, member 12, [RH, Score=380, Expect=2e-127]; ENSMUSG00000043301, Kcnj6, potassium inwardly-rectifying channel, subfamily J, member 6, [RH, Score=370, Expect=4e-125]} {Dmel: FBgn0265042, Irk1, Inwardly rectifying potassium channel 1, [RH, Score=405, Expect=4e-137]} {Celegans: WBGene00002150, irk-2, Inward Rectifying K (Potassium) channel family, [RH, Score=384, Expect=4e-130]} {RNA1509_51986} {RNA1310_33919} {RNA815_28373} Mlig455_036415 {REF} {Length: 3049} {Pfam: Inward rectifier potassium channel C-terminal domain [PF17655.3, score=231.8]; Inward rectifier potassium channel transmembrane domain [PF01007.22, score=196.1]; Ion channel [PF07885.18, score=19.6]} {Human: ENSG00000184185, KCNJ12, potassium voltage-gated channel subfamily J member 12, [RH, Score=379, Expect=4e-128]; ENSG00000260458, KCNJ18, potassium voltage-gated channel subfamily J member 18, [RH, Score=375, Expect=7e-127]; ENSG00000157542, KCNJ6, potassium voltage-gated channel subfamily J member 6, [RH, Score=372, Expect=1e-125]} {Mouse: ENSMUSG00000042529, Kcnj12, potassium inwardly-rectifying channel, subfamily J, member 12, [RH, Score=380, Expect=1e-127]; ENSMUSG00000043301, Kcnj6, potassium inwardly-rectifying channel, subfamily J, member 6, [RH, Score=372, Expect=9e-126]} {Dmel: FBgn0265042, Irk1, Inwardly rectifying potassium channel 1, [RH, Score=406, Expect=4e-136]} {Celegans: WBGene00002150, irk-2, Inward Rectifying K (Potassium) channel family, [RH, Score=385, Expect=2e-130]} {RNA1509_23312} {RNA1310_33919} {RNA815_28373}
2.	MligTC455_17608	472	9.84	Mlig455_011446, Mlig455_061185	Neo: - Age: - Region-enriched R6: 2.727/0.00104		0.981	-	-	0.981	-	-	-	Mlig455_011446 {REF} {Length: 1142} {RNA1509_39006} {RNA1310_31565.1, RNA1509_39006} {RNA1509_39006, RNA815_21884} Mlig455_061185 {REF} {Length: 1200} {RNA1509_39006} {RNA1310_31565.1} {RNA815_21884}
3.	MligTC455_40455	127	2.65	Mlig455_009056, Mlig455_058128	Neo: - Age: -	SSTR5	0.98	-	-	-	-	-	0.980	Mlig455_009056 {REF} {Length: 1996} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=54.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=43.9]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=53.5, Expect=4e-07]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [Score=58.9, Expect=4e-09]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=86.7, Expect=3e-18]} {Smed: dd_Smed_v6_21549_0_1, dd_Smed_v6_21549_0_1, [RH, Score=207, Expect=5e-63]} {RNA1310_15928} {RNA815_7937} Mlig455_058128 {REF} {Length: 2339} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=54.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=43.9]} {Human: ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=53.5, Expect=4e-07]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [Score=58.9, Expect=4e-09]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=86.7, Expect=3e-18]} {Smed: dd_Smed_v6_21549_0_1, dd_Smed_v6_21549_0_1, [RH, Score=207, Expect=5e-63]} {RNA1310_15928} {RNA815_7937}
4.	MligTC455_32621	134	2.79	Mlig455_066523	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.439	ADRA1A	0.979	-	-	-	0.979	-	-	Mlig455_066523 {REF} {Length: 4139} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=179.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.1]; Olfactory receptor [PF13853.8, score=20.2]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=170, Expect=8e-45]; ENSG00000171873, ADRA1D, adrenoceptor alpha 1D, [Score=166, Expect=1e-42]} {Mouse: ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=169, Expect=1e-44]} {Dmel: FBgn0024944, Oamb, Octopamine receptor in mushroom bodies, [RH, Score=146, Expect=6e-36]} {Celegans: WBGene00004778, ser-3, SERotonin/octopamine receptor family, [Score=152, Expect=4e-38]} {Smed: dd_Smed_v6_19063_0_1, dd_Smed_v6_19063_0_1, [Score=200, Expect=6e-56]} {RNA1509_45114} {RNA1310_9880.1} {RNA815_4254}
5.	MligTC455_29715	80	1.66	Mlig455_007411, Mlig455_035206, Mlig455_067683	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_007411 {REF} {Length: 2309} {Pfam: SAP domain [PF02037.29, score=34.5]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.0, Expect=7e-08]} {RNA1509_10113} {RNA1310_19548} {RNA815_12576} Mlig455_035206 {REF} {Length: 2309} {Pfam: SAP domain [PF02037.29, score=34.5]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.0, Expect=7e-08]} {RNA1509_10113} {RNA1310_19548} {RNA815_12576} Mlig455_067683 {REF} {Length: 5073} {Pfam: SAP domain [PF02037.29, score=34.0]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=58.5, Expect=3e-08]} {RNA1509_10113} {RNA1310_18744} {RNA815_12576}
6.	MligTC455_02856	53	1.1	Mlig455_000236, Mlig455_058498	Neo: - Age: Down-Up-Up	B3GNT4, B3GNT6	0.966	-	-	-	-	-	0.966	Mlig455_000236 {REF} {Length: 881} {Pfam: Galactosyltransferase [PF01762.23, score=37.0]} {Human: ENSG00000176383, B3GNT4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=54.7, Expect=2e-08]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=50.8, Expect=2e-07]} {Dmel: FBgn0035558, CG11357, [Score=56.2, Expect=3e-09]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [Score=67.8, Expect=1e-13]} {RNA1310_46446} {RNA815_58184} Mlig455_058498 {REF} {Length: 1681} {Pfam: Galactosyltransferase [PF01762.23, score=143.0]; Fringe-like [PF02434.18, score=22.3]} {Human: ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [Score=123, Expect=6e-31]; ENSG00000172318, B3GALT1, beta-1,3-galactosyltransferase 1, [Score=119, Expect=8e-30]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=123, Expect=6e-31]; ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=119, Expect=5e-30]} {Dmel: FBgn0035558, CG11357, [Score=157, Expect=2e-43]} {Celegans: WBGene00011659, T09E11.10, Hexosyltransferase, [Score=58.2, Expect=3e-09]} {Smed: dd_Smed_v6_4748_0_1, dd_Smed_v6_4748_0_1, [Score=201, Expect=3e-61]} {RNA1509_17403} {RNA1310_46446} {RNA815_28728}
7.	MligTC455_16234	28	0.58	Mlig455_014483	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_014483 {REF} {Length: 503} {NoTransDecoderORF} {RNA1509_8458}
8.	MligTC455_53296	83	1.73	Mlig455_060272	Neo: - Age: Down-Down-Up Region-enriched R2: 3.573/0.04615	LMO4	0.965	-	-	-	-	-	0.965	Mlig455_060272 {REF} {Length: 1193} {Pfam: LIM domain [PF00412.24, score=30.9]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [Score=54.3, Expect=4e-09]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [Score=54.3, Expect=2e-09]} {Dmel: FBgn0265598, Bx, Beadex, [Score=50.4, Expect=1e-07]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [Score=53.5, Expect=4e-09]} {RNA1509_53632} {RNA1310_25695} {RNA815_42113}
9.	MligTC455_17560	87	1.82	Mlig455_022904, Mlig455_022915	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_022904 {REF} {Length: 2918} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=49.1]; Tetratricopeptide repeat [PF13176.8, score=36.1]; Tetratricopeptide repeat [PF00515.30, score=30.6]; Tetratricopeptide repeat [PF13181.8, score=28.3]; Tetratricopeptide repeat [PF13374.8, score=20.0]} {RNA1509_16773} {RNA1310_8123.1} {RNA815_1864.1} Mlig455_022915 {REF} {Length: 3444} {RNA1509_46877} {RNA1310_8825.1} {RNA815_1864.1}
10.	MligTC455_16956	1132	23.59	Mlig455_043907	Neo: - Age: - Region-enriched R8: 3.812/0.00000 Region-enriched R6: 2.698/0.00002	CALB2	0.959	-	-	0.959	-	-	-	Mlig455_043907 {REF} {Length: 2309} {Pfam: EF hand [PF00036.34, score=111.9]; EF-hand domain [PF13405.8, score=101.0]; EF-hand domain pair [PF13499.8, score=88.3]; EF hand [PF13202.8, score=75.4]; EF-hand domain pair [PF13833.8, score=42.7]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=30.7]} {Human: ENSG00000282830, CALB2, calbindin 2, [RH, Score=210, Expect=1e-66]; ENSG00000172137, CALB2, calbindin 2, [RH, Score=210, Expect=1e-66]} {Mouse: ENSMUSG00000003657, Calb2, calbindin 2, [Score=209, Expect=4e-66]} {Dmel: FBgn0004580, Cbp53E, Calbindin 53E, [Score=311, Expect=8e-106]} {Smed: dd_Smed_v6_5030_0_1, dd_Smed_v6_5030_0_1, [RH, Score=413, Expect=2e-146]} {RNA1509_36033, RNA1509_58165} {RNA1310_27019, RNA1509_36033, RNA1509_58165} {RNA1509_36033, RNA1509_58165, RNA815_13274.1}
11.	MligTC455_41920	49	1.01	Mlig455_048072	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_048072 {REF} {Length: 2492} {Pfam: Innexin [PF00876.20, score=330.4]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=88.6, Expect=1e-18]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=254, Expect=8e-80]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=296, Expect=3e-95]} {RNA1509_56200} {RNA1310_9243} {RNA815_4486.1}
12.	MligTC455_33317	89	1.85	Mlig455_027356	Neo: - Age: logFC(26M/2M)=0.510	CASK	0.954	-	-	-	-	-	0.954	Mlig455_027356 {REF} {Length: 7545} {Pfam: PDZ domain [PF00595.26, score=49.9]; L27 domain [PF02828.18, score=40.8]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [Score=208, Expect=3e-59]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=207, Expect=9e-57]} {Dmel: FBgn0013759, CASK, [Score=193, Expect=7e-52]} {Celegans: WBGene00002991, lin-2, [Score=124, Expect=1e-29]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=217, Expect=1e-60]} {RNA1509_30764} {RNA1310_4720.1} {RNA815_18816}
13.	MligTC455_46765	267	5.56	Mlig455_043948	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.779	ABCG2	0.954	-	-	-	-	-	0.954	Mlig455_043948 {REF} {Length: 3252} {Pfam: ABC transporter [PF00005.29, score=103.6]; ABC-2 type transporter [PF01061.26, score=92.9]; ABC-2 type transporter [PF19055.2, score=36.2]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=27.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=18.9]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=236, Expect=2e-68]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=234, Expect=1e-67]; ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [Score=227, Expect=4e-65]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=353, Expect=2e-109]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=239, Expect=2e-70]} {Smed: dd_Smed_v6_4081_0_1, dd_Smed_v6_4081_0_1, [Score=215, Expect=9e-61]} {RNA1509_16342, RNA1509_52642} {RNA1310_2668.1, RNA1509_16342} {RNA1509_16342, RNA815_2541}
14.	MligTC455_03680	160	3.33	Mlig455_004692, Mlig455_004767	Neo: - Age: Up-Down-Up	CNFN	0.952	-	-	-	-	-	0.952	Mlig455_004692 {REF} {Length: 2744} {Pfam: PLAC8 family [PF04749.19, score=58.1]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=57.8, Expect=5e-11]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=56.6, Expect=1e-10]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=94.0, Expect=3e-25]} {RNA1509_30429, RNA1509_49623} {RNA1310_41206, RNA1509_30429} {RNA1509_30429, RNA815_26999} Mlig455_004767 {REF} {Length: 2891} {Pfam: PLAC8 family [PF04749.19, score=58.4]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=52.8, Expect=4e-09]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=52.0, Expect=8e-09]} {Smed: dd_Smed_v6_564_0_1, dd_Smed_v6_564_0_1, [RH, Score=79.0, Expect=2e-19]} {RNA1509_30429} {RNA1310_41206} {RNA815_26999}
15.	MligTC455_03681	83	1.74	Mlig455_004852	Neo: - Age: Down-Up-Up		0.951	-	-	-	-	-	0.951	Mlig455_004852 {REF} {Length: 2755} {Pfam: PLAC8 family [PF04749.19, score=54.4]} {Smed: dd_Smed_v6_564_0_1, dd_Smed_v6_564_0_1, [RH, Score=77.4, Expect=9e-19]} {RNA1509_30429} {RNA1310_44423.1} {RNA815_25576}
16.	MligTC455_08599	133	2.76	Mlig455_004269, Mlig455_004339	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_004269 {REF} {Length: 1241} {NoTransDecoderORF} Mlig455_004339 {REF} {Length: 1394} {NoTransDecoderORF}

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