TomoSeq data search

Data search

Results for MligTC455_14342

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_14342	32	0.67	Mlig455_011258	Neo: - Age: -	AL031281.2	Mlig455_011258 {REF} {Length: 1386} {Pfam: Ras family [PF00071.24, score=113.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=37.6]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=100, Expect=3e-25]; ENSG00000070831, CDC42, cell division cycle 42, [Score=100, Expect=3e-25]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=97.4, Expect=1e-23]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=95.5, Expect=3e-23]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=100, Expect=2e-25]; ENSMUSG00000039960, Rhou, ras homolog family member U, [Score=98.2, Expect=1e-23]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=97.8, Expect=5e-24]} {Dmel: FBgn0010341, Cdc42, [Score=101, Expect=1e-25]} {Celegans: WBGene00015646, mlt-10, [Score=141, Expect=1e-37]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=103, Expect=1e-26]} {RNA1310_33226.1} {RNA815_29146}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_14342

0.67

Mlig455_011258

Neo: -

Age: -

AL031281.2

Mlig455_011258 {REF} {Length: 1386} {Pfam: Ras family [PF00071.24, score=113.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=37.6]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=100, Expect=3e-25]; ENSG00000070831, CDC42, cell division cycle 42, [Score=100, Expect=3e-25]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=97.4, Expect=1e-23]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=95.5, Expect=3e-23]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=100, Expect=2e-25]; ENSMUSG00000039960, Rhou, ras homolog family member U, [Score=98.2, Expect=1e-23]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=97.8, Expect=5e-24]} {Dmel: FBgn0010341, Cdc42, [Score=101, Expect=1e-25]} {Celegans: WBGene00015646, mlt-10, [Score=141, Expect=1e-37]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=103, Expect=1e-26]} {RNA1310_33226.1} {RNA815_29146}

Cumulative graph for MligTC455_14342

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.056	1.064	0.32493	0.97364
RegionR2	2.386	1.064	0.22123	0.59014
RegionR3	2.665	1.064	0.01625	0.20716
RegionR4	-0.457	1.064	0.89327	1.00000
RegionR5	0.003	1.064	0.84661	1.00000
RegionR6	0.84	1.064	0.58820	1.00000
RegionR7	1.123	1.064	0.59343	1.00000
RegionR8	-0.505	1.064	0.98352	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.967	1.064	0.99989	1.00000
RegenerationR2	0.476	1.064	0.65552	0.93869
RegenerationR3	0.809	1.064	0.49660	0.85669
RegenerationR4	2.944	1.064	0.04401	0.33833
RegenerationR5	0.544	1.064	0.82327	0.99527
RegenerationR6	2.828	1.064	0.04628	0.26838
RegenerationBL	-2.154	1.064	0.41694	0.78598
RegenerationTP	1.776	1.064	0.33669	0.78081

Genes with expression patterns similar to MligTC455_14342

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_14342	32	0.67	Mlig455_011258	Neo: - Age: -	AL031281.2	2	-	-	-	1.000	-	1.000	Mlig455_011258 {REF} {Length: 1386} {Pfam: Ras family [PF00071.24, score=113.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=37.6]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=100, Expect=3e-25]; ENSG00000070831, CDC42, cell division cycle 42, [Score=100, Expect=3e-25]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=97.4, Expect=1e-23]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=95.5, Expect=3e-23]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=100, Expect=2e-25]; ENSMUSG00000039960, Rhou, ras homolog family member U, [Score=98.2, Expect=1e-23]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=97.8, Expect=5e-24]} {Dmel: FBgn0010341, Cdc42, [Score=101, Expect=1e-25]} {Celegans: WBGene00015646, mlt-10, [Score=141, Expect=1e-37]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [Score=103, Expect=1e-26]} {RNA1310_33226.1} {RNA815_29146}
2.	MligTC455_28805	26	0.54	Mlig455_006382, Mlig455_011945	Neo: - Age: Down-Down-Up	CRB2	0.98	-	-	-	0.980	-	-	Mlig455_006382 {REF} {Length: 1183} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=20.2]} {RNA1509_18097} {RNA1310_495.1} {RNA815_13065} Mlig455_011945 {REF} {Length: 4613} {Pfam: EGF-like domain [PF00008.29, score=69.1]; Human growth factor-like EGF [PF12661.9, score=31.1]; EGF-like domain [PF07974.15, score=30.1]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=122, Expect=4e-28]; ENSG00000134250, NOTCH2, notch 2, [Score=121, Expect=1e-27]; ENSG00000148400, NOTCH1, notch 1, [Score=120, Expect=2e-27]; ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [Score=117, Expect=2e-26]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [Score=117, Expect=2e-26]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=125, Expect=6e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=122, Expect=3e-28]; ENSMUSG00000026923, Notch1, notch 1, [Score=121, Expect=9e-28]} {Dmel: FBgn0259685, crb, crumbs, [Score=135, Expect=2e-32]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=108, Expect=6e-24]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=113, Expect=1e-25]} {RNA1509_35846} {RNA1310_9600.1} {RNA815_3985.1}
3.	MligTC455_23232	15	0.32	Mlig455_006559	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_006559 {REF} {Length: 5217} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_1489} {RNA1310_997.1} {RNA815_1017.1}
4.	MligTC455_09580	19	0.4	Mlig455_010996	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_010996 {REF} {Length: 1464} {NoTransDecoderORF} {RNA1310_106744} {RNA815_31856}
5.	MligTC455_13588	43	0.9	Mlig455_070234	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_070234 {REF} {Length: 857} {Pfam: Tup N-terminal [PF08581.12, score=24.8]} {RNA1310_118445}