M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_15021

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15021 132 2.74 Mlig455_006178, Mlig455_053300

Neo: -

Age: -

Mlig455_006178 {REF} {Length: 156} {NoTransDecoderORF} {RNA1310_37672}

Mlig455_053300 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_37672}

Cumulative graph for MligTC455_15021

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.53 2.01 0.24671 0.89340
RegionR2 1.436 2.01 0.28945 0.67786
RegionR3 -0.676 2.01 0.97383 1.00000
RegionR4 -1.252 2.01 0.99429 1.00000
RegionR5 0.932 2.01 0.41367 0.77313
RegionR6 1.18 2.01 0.31043 0.90044
RegionR7 0.609 2.01 0.63621 1.00000
RegionR8 3.299 2.01 0.00615 0.14272

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.758 2.01 0.99993 1.00000
RegenerationR2 -3.353 2.01 0.00308 0.08488
RegenerationR3 -1.758 2.01 0.17563 0.61144
RegenerationR4 -0.022 2.01 0.98482 1.00000
RegenerationR5 -2.035 2.01 0.06335 0.39874
RegenerationR6 -1.581 2.01 0.17819 0.51198
RegenerationBL -1.899 2.01 0.16047 0.48051
RegenerationTP -2.838 2.01 0.04264 0.34273


Genes with expression patterns similar to MligTC455_15021

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15021 132 2.74 Mlig455_006178, Mlig455_053300

Neo: -

Age: -

 5 1.000 1.000 1.000 - 1.000 1.000

Mlig455_006178 {REF} {Length: 156} {NoTransDecoderORF} {RNA1310_37672}

Mlig455_053300 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_37672}
2. MligTC455_21218 254 5.29 Mlig455_039115

Neo: -

Age: logFC(26M/2M)=0.413

 1.755 - 0.966 - - 0.789 - Mlig455_039115 {REF} {Length: 3877} {RNA1509_42019} {RNA1310_12333.1, RNA1509_42019} {RNA1509_42019, RNA815_15134}
3. MligTC455_44684 39 0.82 Mlig455_037824, Mlig455_065518, Mlig455_067165

Neo: -

Age: -

 0.974 - 0.974 - - - -

Mlig455_037824 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}

Mlig455_065518 {REF} {Length: 208} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}

Mlig455_067165 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111}
4. MligTC455_37543 156 3.25 Mlig455_043334

Neo: -

Age: -

 0.966 - 0.966 - - - - Mlig455_043334 {REF} {Length: 1292} {TRANSSPLICED} {RNA1509_57440} {RNA1310_17682} {RNA815_43178}
5. MligTC455_03038 227 4.72 Mlig455_060778

Neo: -

Age: Down-Up-Down

Region-enriched R8: 6.261/0.00000
Region-enriched R7: 4.320/0.00011

 0.964 - 0.964 - - - - Mlig455_060778 {REF} {Length: 4155} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=27.8} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=55.1, Expect=5e-07]} {RNA1509_16236} {RNA1310_4008} {RNA815_2550}
6. MligTC455_34331 94 1.95 Mlig455_008272, Mlig455_015962, Mlig455_032570, Mlig455_033195

Neo: -

Age: -

 0.963 - 0.963 - - - -

Mlig455_008272 {REF} {Length: 823} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}

Mlig455_015962 {REF} {Length: 3178} {Pfam: Coiled-coil region of CCDC155 or KASH [PF14662.8, score=23.3]; Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_17352.1} {RNA815_9324.1}

Mlig455_032570 {REF} {Length: 263} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}

Mlig455_033195 {REF} {Length: 272} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}
7. MligTC455_36862 48534 1011.12 Mlig455_032205, Mlig455_054203, Mlig455_060747

Neo: -

Age: logFC(26M/2M)=-0.489

Region-specific R8: 5.960
Region-specific R7: 4.629

Region-enriched R8: 5.559/0.00000
Region-enriched R7: 3.617/0.00000

 TMEM26 0.963 - 0.963 - - - -

Mlig455_032205 {REF} {Length: 3105} {Pfam: GIY-YIG catalytic domain [PF01541.26, score=28.4]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=44.7, Expect=4e-06]} {RNA1509_5620} {RNA1310_11306.2} {RNA815_30428.1}

Mlig455_054203 {REF} {Length: 4834} {Pfam: Transmembrane protein 26 [PF09772.11, score=50.1]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=45.8, Expect=2e-06]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [Score=52.4, Expect=5e-09]} {Dmel: FBgn0039429, CG14238, [Score=61.2, Expect=3e-12]} {Celegans: WBGene00022469, Y119C1B.3, [Score=45.8, Expect=5e-07]} {Smed: dd_Smed_v6_16493_0_1, dd_Smed_v6_16493_0_1, [Score=53.9, Expect=5e-10]} {RNA1509_5620} {RNA1310_11306.2} {RNA815_30428.1}

Mlig455_060747 {REF} {Length: 5000} {Pfam: Transmembrane protein 26 [PF09772.11, score=50.1]} {Human: ENSG00000196932, TMEM26, transmembrane protein 26, [Score=45.8, Expect=1e-06]} {Mouse: ENSMUSG00000060044, Tmem26, transmembrane protein 26, [Score=53.5, Expect=2e-09]} {Dmel: FBgn0039429, CG14238, [Score=60.8, Expect=4e-12]} {Celegans: WBGene00022469, Y119C1B.3, [Score=45.8, Expect=6e-07]} {Smed: dd_Smed_v6_16493_0_2, dd_Smed_v6_16493_0_2, [Score=53.9, Expect=6e-10]} {RNA1509_5620} {RNA1310_11306.2, RNA1509_5620} {RNA1509_5620, RNA815_30428.1}
8. MligTC455_13900 58 1.21 Mlig455_056630

Neo: -

Age: Up-Up-Down

 CACNA1G 0.962 - 0.962 - - - - Mlig455_056630 {REF} {Length: 6848} {Pfam: Ion transport protein [PF00520.33, score=782.6]; Polycystin cation channel [PF08016.14, score=58.0]; FAM176 family [PF14851.8, score=20.2]} {Human: ENSG00000006283, CACNA1G, calcium voltage-gated channel subunit alpha1 G, [RH, Score=1001, Expect=0.0]} {Mouse: ENSMUSG00000024112, Cacna1h, calcium channel, voltage-dependent, T type, alpha 1H subunit, [RH, Score=1032, Expect=0.0]; ENSMUSG00000020866, Cacna1g, calcium channel, voltage-dependent, T type, alpha 1G subunit, [RH, Score=999, Expect=0.0]} {Dmel: FBgn0264386, Ca-alpha1T, Ca[2+]-channel protein alpha[[1]] subunit T, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_14730_0_1, dd_Smed_v6_14730_0_1, [RH, Score=1694, Expect=0.0]} {RNA1509_48619} {RNA1310_5687, RNA1509_48619} {RNA1509_48619, RNA815_28647}
9. MligTC455_23163 51 1.06 Mlig455_040817

Neo: -

Age: -

 0.962 - 0.962 - - - - Mlig455_040817 {REF} {Length: 5911} {RNA1509_47755} {RNA1310_25553.1} {RNA815_23309}
10. MligTC455_45303 152 3.16 Mlig455_041340

Neo: -

Age: Down-Up-Down

 ZDHHC14 0.962 - 0.962 - - - - Mlig455_041340 {REF} {Length: 2702} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=139.7]} {Human: ENSG00000175048, ZDHHC14, zinc finger DHHC-type containing 14, [Score=308, Expect=1e-100]; ENSG00000188706, ZDHHC9, zinc finger DHHC-type containing 9, [Score=308, Expect=8e-102]} {Mouse: ENSMUSG00000036985, Zdhhc9, zinc finger, DHHC domain containing 9, [Score=309, Expect=2e-102]; ENSMUSG00000034265, Zdhhc14, zinc finger, DHHC domain containing 14, [Score=303, Expect=1e-98]} {Dmel: FBgn0260941, app, approximated, [Score=289, Expect=2e-94]} {Celegans: WBGene00012948, dhhc-2, Palmitoyltransferase, [RH, Score=220, Expect=1e-67]} {Smed: dd_Smed_v6_9975_0_1, dd_Smed_v6_9975_0_1, [RH, Score=294, Expect=2e-96]} {RNA1509_25723, RNA1509_35241} {RNA1310_8511.2, RNA1509_25723, RNA1509_35241} {RNA1509_25723, RNA1509_35241, RNA815_8570}
11. MligTC455_14236 149 3.1 Mlig455_017105

Neo: -

Age: Up-Down-Down

 WDSUB1 0.961 - 0.961 - - - - Mlig455_017105 {REF} {Length: 3758} {Pfam: WD domain, G-beta repeat [PF00400.34, score=166.2]; U-box domain [PF04564.17, score=59.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=44.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=42.6]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.6]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [Score=210, Expect=2e-60]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [Score=197, Expect=2e-56]} {Dmel: FBgn0021874, Nle, Notchless, [Score=105, Expect=9e-24]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=99.0, Expect=5e-22]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [Score=103, Expect=2e-24]} {RNA1310_51636} {RNA815_18559}
12. MligTC455_20254 351 7.31 Mlig455_029558

Neo: -

Age: logFC(26M/2M)=-0.727

 0.961 - 0.961 - - - - Mlig455_029558 {REF} {Length: 442} {RNA1509_31276} {RNA1310_93944, RNA1509_31276} {RNA1509_31276, RNA815_51607}
13. MligTC455_35154 1576 32.84 Mlig455_032963, Mlig455_063984

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.509

 TSPAN18 0.96 - 0.960 - - - -

Mlig455_032963 {REF} {Length: 278} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=22.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=58.9, Expect=1e-11]} {RNA1509_43848} {RNA1310_1928.2} {RNA815_1581}

Mlig455_063984 {REF} {Length: 1905} {Pfam: Tetraspanin family [PF00335.22, score=81.5]} {Human: ENSG00000157570, TSPAN18, tetraspanin 18, [Score=51.2, Expect=6e-07]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=49.7, Expect=2e-06]} {Dmel: FBgn0029508, Tsp42Ea, Tetraspanin 42Ea, [Score=46.6, Expect=9e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=58.9, Expect=4e-10]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=70.5, Expect=4e-14]} {RNA1509_2681} {RNA1310_15134.2} {RNA815_5522.1}
14. MligTC455_37221 155 3.24 Mlig455_053581

Neo: -

Age: -

Region-enriched R8: 6.080/0.00000
Region-enriched R7: 4.687/0.00015

 FMNL3 0.96 - 0.960 - - - - Mlig455_053581 {REF} {Length: 3204} {Pfam: Formin Homology 2 Domain [PF02181.25, score=166.7]} {Human: ENSG00000161791, FMNL3, formin like 3, [Score=117, Expect=3e-26]; ENSG00000157827, FMNL2, formin like 2, [Score=117, Expect=6e-26]} {Mouse: ENSMUSG00000055805, Fmnl1, formin-like 1, [Score=127, Expect=2e-29]} {Dmel: FBgn0267795, Frl, Formin-like, [Score=103, Expect=4e-22]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_3917_0_2, dd_Smed_v6_3917_0_2, [Score=79.0, Expect=1e-14]} {RNA1509_29857} {RNA1310_4919} {RNA815_9351}
15. MligTC455_17954 78 1.62 Mlig455_008310

Neo: -

Age: -

 0.959 - 0.959 - - - - Mlig455_008310 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_29114} {RNA1310_33596.1} {RNA815_24119.2}
16. MligTC455_38585 271 5.64 Mlig455_049023, Mlig455_051567

Neo: -

Age: Down-Up-Down

 0.958 - 0.958 - - - -

Mlig455_049023 {REF} {Length: 1479} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1}

Mlig455_051567 {REF} {Length: 1403} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1}
17. MligTC455_40832 415 8.65 Mlig455_000165

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.090

 0.958 - 0.958 - - - - Mlig455_000165 {REF} {Length: 2311} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=50.4, Expect=2e-07]} {RNA1509_21542} {RNA1310_31158} {RNA815_28463}
18. MligTC455_34727 96 2 Mlig455_041259

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.811

Region-enriched R8: 4.340/0.01025

 GLIPR1 0.957 - 0.957 - - - - Mlig455_041259 {REF} {Length: 5028} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.4]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [RH, Score=107, Expect=7e-26]} {Dmel: FBgn0038126, CG8483, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00003055, lon-1, LONg, [Score=67.0, Expect=6e-12]} {Smed: dd_Smed_v6_681_0_1, dd_Smed_v6_681_0_1, [Score=104, Expect=1e-25]} {RNA1509_36146} {RNA1310_23199} {RNA815_7031}
19. MligTC455_44201 666 13.88 Mlig455_028290

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.515

Region-enriched R4: 3.067/0.00110

Regeneration-downregulated BL: -4.747

Regeneration-depleted BL: -4.747

 0.957 - 0.957 - - - - Mlig455_028290 {REF} {Length: 1226} {RNA1509_25517, RNA1509_42816} {RNA1310_33727, RNA1509_25517} {RNA1509_25517, RNA815_13932}
20. MligTC455_45250 173 3.61 Mlig455_012405

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.370

Region-enriched R8: 4.444/0.04464

 0.957 - 0.957 - - - - Mlig455_012405 {REF} {Length: 2733} {RNA1310_16550} {RNA815_17676}
21. MligTC455_31519 9556 199.07 Mlig455_055347

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.365

Region-enriched R8: 7.870/0.00000
Region-enriched R7: 5.026/0.00000

 PI16 0.955 - 0.955 - - - - Mlig455_055347 {REF} {Length: 1681} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=56.5]; Kringle domain [PF00051.20, score=52.7]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=84.3, Expect=2e-17]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=82.4, Expect=6e-17]} {Dmel: FBgn0038126, CG8483, [Score=97.4, Expect=2e-22]} {Celegans: WBGene00003055, lon-1, LONg, [Score=65.1, Expect=9e-12]} {Smed: dd_Smed_v6_433_0_1, dd_Smed_v6_433_0_1, [Score=111, Expect=3e-29]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}
22. MligTC455_31839 175 3.65 Mlig455_004032, Mlig455_060430

Neo: -

Age: -

 0.955 - 0.955 - - - -

Mlig455_004032 {REF} {Length: 1233} {TRANSSPLICED} {RNA1509_21492} {RNA1310_1437} {RNA815_11827.1}

Mlig455_060430 {REF} {Length: 831} {RNA1509_19124} {RNA1310_1437} {RNA815_889}
23. MligTC455_35153 6628 138.09 Mlig455_035972, Mlig455_047634

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.329

Region-enriched R8: 1.701/0.00319

 AF241726.2 0.955 - 0.955 - - - -

Mlig455_035972 {REF} {Length: 1946} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1310_15134.2, RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530} {RNA1509_20707, RNA1509_2681, RNA1509_28721, RNA1509_29848, RNA1509_31530, RNA815_5522.1}

Mlig455_047634 {REF} {Length: 1948} {Pfam: Tetraspanin family [PF00335.22, score=107.2]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=59.3, Expect=1e-09]; ENSG00000130167, TSPAN16, tetraspanin 16, [Score=58.5, Expect=1e-09]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000058254, Tspan7, tetraspanin 7, [Score=58.5, Expect=9e-10]; ENSMUSG00000025351, Cd63, CD63 antigen, [Score=58.2, Expect=1e-09]} {Dmel: FBgn0020372, TM4SF, Transmembrane 4 superfamily, [RH, Score=48.5, Expect=3e-06]} {Celegans: WBGene00006633, tsp-7, Tetraspanin, [Score=70.1, Expect=5e-14]} {Smed: dd_Smed_v6_546_0_1, dd_Smed_v6_546_0_1, [RH, Score=72.0, Expect=8e-15]} {RNA1509_2681} {RNA1310_15134.2} {RNA815_5522.1}
24. MligTC455_36052 35640 742.5 Mlig455_029280, Mlig455_058880

Neo: -

Age: Down-Up-Up

Region-enriched R8: 7.655/0.00000
Region-enriched R7: 5.267/0.00000

Regeneration-downregulated BL: -5.564

Regeneration-depleted BL: -5.564

 0.955 - 0.955 - - - -

Mlig455_029280 {REF} {Length: 490} {RNA1509_8306} {RNA1310_81421} {RNA815_9196}

Mlig455_058880 {REF} {Length: 1197} {RNA1509_28223, RNA1509_4978, RNA1509_8306} {RNA1310_81421, RNA1509_28223, RNA1509_4978, RNA1509_8306} {RNA1509_28223, RNA1509_4978, RNA1509_8306, RNA815_9196}
25. MligTC455_47500 19 0.41 Mlig455_010604

Neo: -

Age: -

 0.955 - 0.955 - - - - Mlig455_010604 {REF} {Length: 475} {NoTransDecoderORF} {RNA1310_110887}
26. MligTC455_13159 114 2.37 Mlig455_013704, Mlig455_013706, Mlig455_013723, Mlig455_013725

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.865

 0.954 - 0.954 - - - -

Mlig455_013704 {REF} {Length: 1853} {Pfam: Major Facilitator Superfamily [PF07690.18, score=17.7]} {RNA1310_31248} {RNA815_22601}

Mlig455_013706 {REF} {Length: 2488} {Pfam: Major Facilitator Superfamily [PF07690.18, score=17.7]} {RNA1310_31248} {RNA815_22601}

Mlig455_013723 {REF} {Length: 2490} {Pfam: Major Facilitator Superfamily [PF07690.18, score=17.7]} {RNA1310_31248} {RNA815_22601}

Mlig455_013725 {REF} {Length: 2490} {Pfam: Major Facilitator Superfamily [PF07690.18, score=17.7]} {RNA1310_31248} {RNA815_22601}
27. MligTC455_28198 639 13.31 Mlig455_030935, Mlig455_032617

Neo: -

Age: Down-Up-Down

 0.954 - 0.954 - - - -

Mlig455_030935 {REF} {Length: 6761} {Pfam: African swine fever virus J13L protein [PF05568.13, score=44.9]} {RNA1509_19556} {RNA1310_9365} {RNA815_12631}

Mlig455_032617 {REF} {Length: 6082} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=31.2]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=96.3, Expect=1e-19]} {RNA1509_12078, RNA1509_19556} {RNA1310_9365, RNA1509_12078} {RNA1509_12078, RNA815_12631}
28. MligTC455_28325 467 9.73 Mlig455_022268, Mlig455_036441, Mlig455_037355, Mlig455_062974

Neo: -

Age: -

Region-enriched R8: 2.686/0.01742

 0.954 - 0.954 - - - -

Mlig455_022268 {REF} {Length: 1417} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_036441 {REF} {Length: 3744} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}

Mlig455_037355 {REF} {Length: 1390} {RNA1509_56606} {RNA1310_15800} {RNA815_31246}

Mlig455_062974 {REF} {Length: 2207} {RNA1509_56606} {RNA1310_32667} {RNA815_31246}
29. MligTC455_31518 19118 398.29 Mlig455_053864, Mlig455_053878

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=2.053

Region-enriched R8: 7.674/0.00000
Region-enriched R7: 4.838/0.00008

 PI16 0.954 - 0.954 - - - -

Mlig455_053864 {REF} {Length: 1794} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=56.1]; Kringle domain [PF00051.20, score=52.3]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=99.0, Expect=3e-22]} {Dmel: FBgn0038126, CG8483, [Score=102, Expect=1e-23]} {Celegans: WBGene00011724, scl-18, SCP-Like extracellular protein, [RH, Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_924_0_1, dd_Smed_v6_924_0_1, [RH, Score=128, Expect=3e-35]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}

Mlig455_053878 {REF} {Length: 1368} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=56.1]; Kringle domain [PF00051.20, score=52.3]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=99.0, Expect=3e-22]} {Dmel: FBgn0038126, CG8483, [Score=102, Expect=1e-23]} {Celegans: WBGene00011724, scl-18, SCP-Like extracellular protein, [RH, Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_924_0_1, dd_Smed_v6_924_0_1, [RH, Score=128, Expect=3e-35]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}
30. MligTC455_31520 9547 198.9 Mlig455_055402

Neo: -

Age: logFC(26M/2M)=-0.427

Region-enriched R8: 7.718/0.00000
Region-enriched R7: 4.881/0.00003

 PI16 0.954 - 0.954 - - - - Mlig455_055402 {REF} {Length: 1363} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=27.4]} {Human: ENSG00000164530, PI16, peptidase inhibitor 16, [Score=69.3, Expect=4e-13]; ENSG00000173401, GLIPR1L1, GLIPR1 like 1, [Score=67.8, Expect=4e-13]} {Mouse: ENSMUSG00000024011, Pi16, peptidase inhibitor 16, [Score=71.2, Expect=7e-14]} {Dmel: FBgn0038126, CG8483, [Score=55.8, Expect=6e-09]} {Celegans: WBGene00009890, scl-9, SCP-Like extracellular protein, [Score=50.4, Expect=1e-07]} {Smed: dd_Smed_v6_924_0_2, dd_Smed_v6_924_0_2, [Score=87.0, Expect=1e-21]} {RNA1509_603} {RNA1310_25676} {RNA815_7928}
31. MligTC455_00324 25 0.52 Mlig455_027073

Neo: -

Age: -

 0.953 - 0.953 - - - - Mlig455_027073 {REF} {Length: 287} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49957} {RNA1310_7447.1} {RNA815_1983}
32. MligTC455_15043 1215 25.31 Mlig455_028582, Mlig455_028601, Mlig455_056913

Neo: -

Age: Down-Up-Down

Region-enriched R8: 8.125/0.00000
Region-enriched R7: 5.243/0.00010

 AL928654.3, CRIP1 0.953 - 0.953 - - - -

Mlig455_028582 {REF} {Length: 547} {Pfam: LIM domain [PF00412.24, score=54.3]; DNA gyrase inhibitor YacG [PF03884.16, score=18.3]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=140, Expect=3e-45]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=140, Expect=3e-45]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=99.4, Expect=5e-26]} {Celegans: WBGene00015216, valv-1, [Score=114, Expect=3e-35]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=54.3, Expect=1e-10]} {RNA1310_46877} {RNA815_34890}

Mlig455_028601 {REF} {Length: 1461} {Pfam: LIM domain [PF00412.24, score=56.4]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=124, Expect=5e-39]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=124, Expect=5e-39]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=122, Expect=3e-38]} {Dmel: FBgn0039055, Rassf, Ras association family member, [RH, Score=94.0, Expect=3e-24]} {Celegans: WBGene00015216, valv-1, [RH, Score=101, Expect=2e-30]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=55.8, Expect=2e-11]} {RNA1509_42587} {RNA1310_58649} {RNA815_34890}

Mlig455_056913 {REF} {Length: 444} {Pfam: LIM domain [PF00412.24, score=34.9]} {Human: ENSG00000257341, AL928654.3, novel transcript, [Score=103, Expect=6e-30]; ENSG00000213145, CRIP1, cysteine rich protein 1, [Score=103, Expect=6e-30]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [Score=103, Expect=1e-29]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=77.4, Expect=9e-18]} {Celegans: WBGene00015216, valv-1, [Score=83.6, Expect=2e-22]} {RNA1310_46877} {RNA815_34890}
33. MligTC455_10775 50 1.05 Mlig455_023939

Neo: -

Age: -

 GABBR1 0.952 - 0.952 - - - - Mlig455_023939 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=159.6]; Receptor family ligand binding region [PF01094.30, score=113.8]; Periplasmic binding protein [PF13458.8, score=20.4]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=166, Expect=6e-42]} {Dmel: FBgn0031275, GABA-B-R3, metabotropic GABA-B receptor subtype 3, [Score=151, Expect=3e-37]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=123, Expect=8e-29]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=72.4, Expect=6e-14]} {RNA1509_12849} {RNA1310_9423.1} {RNA815_7350.2}
34. MligTC455_28199 267 5.56 Mlig455_059062

Neo: -

Age: -

 0.952 - 0.952 - - - - Mlig455_059062 {REF} {Length: 1150} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=95.8]} {RNA1509_5424} {RNA1310_9365} {RNA815_12631}
35. MligTC455_52469 900 18.74 Mlig455_021754

Neo: Irradiation

Age: -

Region-enriched R8: 7.394/0.00000
Region-enriched R7: 3.293/0.04183

 TACR3 0.952 - 0.952 - - - - Mlig455_021754 {REF} {Length: 2340} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.7]} {Human: ENSG00000169836, TACR3, tachykinin receptor 3, [Score=65.1, Expect=8e-11]; ENSG00000075073, TACR2, tachykinin receptor 2, [Score=63.2, Expect=3e-10]} {Mouse: ENSMUSG00000028172, Tacr3, tachykinin receptor 3, [Score=64.3, Expect=9e-11]; ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0085410, TrissinR, Trissin receptor, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=70.1, Expect=8e-13]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_15830} {RNA1310_8194} {RNA815_11760.1}
36. MligTC455_09225 57 1.19 Mlig455_044149, Mlig455_044161

Neo: -

Age: -

Region-enriched R8: 7.512/0.00030

 0.951 - 0.951 - - - -

Mlig455_044149 {REF} {Length: 959} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_11547} {RNA815_12549.1}

Mlig455_044161 {REF} {Length: 502} {NoTransDecoderORF} {RNA1509_28941} {RNA1310_11547} {RNA815_12549.1}
37. MligTC455_11487 239 4.97 Mlig455_028071, Mlig455_028135, Mlig455_028274

Neo: -

Age: Down-Down-Up

 EPS8L3 0.951 - 0.951 - - - -

Mlig455_028071 {REF} {Length: 1549} {Pfam: Variant SH3 domain [PF07653.19, score=22.6]; SH3 domain [PF00018.30, score=20.4]} {Human: ENSG00000198758, EPS8L3, EPS8 like 3, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_8729_0_1, dd_Smed_v6_8729_0_1, [Score=50.4, Expect=3e-07]} {RNA1509_52341} {RNA1310_32902} {RNA815_31554}

Mlig455_028135 {REF} {Length: 1583} {Pfam: Variant SH3 domain [PF07653.19, score=22.6]; SH3 domain [PF00018.30, score=20.4]} {Smed: dd_Smed_v6_8729_0_1, dd_Smed_v6_8729_0_1, [Score=50.4, Expect=3e-07]} {RNA1509_52341} {RNA1310_32902} {RNA815_31554}

Mlig455_028274 {REF} {Length: 1553} {Pfam: Variant SH3 domain [PF07653.19, score=23.2]; SH3 domain [PF00018.30, score=21.0]} {Human: ENSG00000198758, EPS8L3, EPS8 like 3, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_8729_0_1, dd_Smed_v6_8729_0_1, [Score=50.8, Expect=2e-07]} {RNA1509_52341} {RNA1310_32902, RNA1509_52341} {RNA1509_52341, RNA815_31554}
38. MligTC455_16778 196 4.07 Mlig455_000354

Neo: -

Age: -

 PRB3 0.951 - 0.951 - - - - Mlig455_000354 {REF} {Length: 2874} {Pfam: WH2 motif [PF02205.22, score=36.7]} {Human: ENSG00000197870, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]; ENSG00000275624, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]} {RNA1310_25422} {RNA815_34565}
39. MligTC455_18825 100 2.08 Mlig455_046641, Mlig455_046661

Neo: -

Age: Down-Down-Up

 0.951 - 0.951 - - - -

Mlig455_046641 {REF} {Length: 1925} {RNA1310_39270} {RNA815_46731}

Mlig455_046661 {REF} {Length: 1636} {TRANSSPLICED} {RNA1310_39270} {RNA815_46731}
40. MligTC455_27707 30 0.61 Mlig455_056161

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.572

 TCTN1 0.951 0.951 - - - - - Mlig455_056161 {REF} {Length: 3279} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=167.9]} {Human: ENSG00000204852, TCTN1, tectonic family member 1, [RH, Score=142, Expect=3e-35]} {Mouse: ENSMUSG00000038593, Tctn1, tectonic family member 1, [RH, Score=131, Expect=6e-32]} {Smed: dd_Smed_v6_11225_0_1, dd_Smed_v6_11225_0_1, [RH, Score=73.6, Expect=5e-14]} {RNA1509_56923} {RNA1310_313} {RNA815_1107}
41. MligTC455_14757 726 15.12 Mlig455_043399, Mlig455_043416, Mlig455_043559, Mlig455_043567

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.347

Region-specific R8: 6.849

Region-enriched R8: 6.705/0.00000
Region-enriched R7: 2.897/0.00199

Regeneration-downregulated BL: -8.524

Regeneration-depleted BL: -8.524

 0.95 - 0.950 - - - -

Mlig455_043399 {REF} {Length: 5997} {Dmel: FBgn0010434, cora, coracle, [Score=80.5, Expect=1e-14]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}

Mlig455_043416 {REF} {Length: 6138} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}

Mlig455_043559 {REF} {Length: 7159} {RNA1509_17394} {RNA1310_38694} {RNA815_21047}

Mlig455_043567 {REF} {Length: 8454} {Dmel: FBgn0010434, cora, coracle, [Score=51.6, Expect=3e-06]} {RNA1509_17394} {RNA1310_20597} {RNA815_24724}
42. MligTC455_15042 369 7.7 Mlig455_005904

Neo: -

Age: Down-Up-Down

Region-specific R8: 8.223

Region-enriched R8: 8.355/0.00000
Region-enriched R7: 5.709/0.00000

 CRIP1 0.95 - 0.950 - - - - Mlig455_005904 {REF} {Length: 675} {Pfam: LIM domain [PF00412.24, score=56.3]} {Human: ENSG00000213145, CRIP1, cysteine rich protein 1, [RH, Score=142, Expect=5e-46]; ENSG00000257341, AL928654.3, novel transcript, [RH, Score=142, Expect=5e-46]} {Mouse: ENSMUSG00000006360, Crip1, cysteine-rich protein 1 (intestinal), [RH, Score=141, Expect=4e-45]} {Dmel: FBgn0039055, Rassf, Ras association family member, [Score=102, Expect=7e-27]} {Celegans: WBGene00015216, valv-1, [Score=115, Expect=8e-36]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=57.0, Expect=9e-12]} {RNA1310_46877} {RNA815_34890}
43. MligTC455_28191 561 11.69 Mlig455_071059

Neo: -

Age: Up-Down-Down

 ACRV1 0.95 - 0.950 - - - - Mlig455_071059 {REF} {Length: 7291} {Human: ENSG00000134940, ACRV1, acrosomal vesicle protein 1, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=91.7, Expect=6e-18]} {RNA1509_51272} {RNA1310_143.1} {RNA815_104.1}
44. MligTC455_39425 108 2.25 Mlig455_056747

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.524/0.03122

 TFPI 0.95 - 0.950 - - - - Mlig455_056747 {REF} {Length: 6396} {Pfam: Kunitz/Bovine pancreatic trypsin inhibitor domain [PF00014.25, score=255.9]; Immunoglobulin domain [PF13927.8, score=72.2]; Immunoglobulin domain [PF13895.8, score=60.2]; Immunoglobulin I-set domain [PF07679.18, score=48.8]; Immunoglobulin domain [PF00047.27, score=44.3]; Immunoglobulin V-set domain [PF07686.19, score=37.1]; Antistasin family [PF02822.16, score=30.1]} {Human: ENSG00000003436, TFPI, tissue factor pathway inhibitor, [Score=90.5, Expect=7e-19]} {Mouse: ENSMUSG00000027082, Tfpi, tissue factor pathway inhibitor, [RH, Score=93.6, Expect=5e-20]} {Dmel: FBgn0003137, Ppn, Papilin, [RH, Score=153, Expect=9e-37]} {Celegans: WBGene00003242, mig-6, Papilin, [RH, Score=125, Expect=2e-28]} {Smed: dd_Smed_v6_8833_0_1, dd_Smed_v6_8833_0_1, [RH, Score=160, Expect=3e-39]} {RNA1509_1956} {RNA1310_1956} {RNA815_29941}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA