TomoSeq data search

Data search

Results for MligTC455_27707

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27707

30

0.61

Mlig455_056161

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.572

TCTN1

Mlig455_056161 {REF} {Length: 3279} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=167.9]} {Human: ENSG00000204852, TCTN1, tectonic family member 1, [RH, Score=142, Expect=3e-35]} {Mouse: ENSMUSG00000038593, Tctn1, tectonic family member 1, [RH, Score=131, Expect=6e-32]} {Smed: dd_Smed_v6_11225_0_1, dd_Smed_v6_11225_0_1, [RH, Score=73.6, Expect=5e-14]} {RNA1509_56923} {RNA1310_313} {RNA815_1107}

Cumulative graph for MligTC455_27707

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	6.499	1.067	0.99933	1.00000
RegionR2	-2.968	1.067	0.99951	1.00000
RegionR3	-1.784	1.067	0.98976	1.00000
RegionR4	4.551	1.067	0.02045	0.10385
RegionR5	-0.973	1.067	0.93309	1.00000
RegionR6	-1.428	1.067	0.99051	1.00000
RegionR7	-4.607	1.067	0.99963	1.00000
RegionR8	0.71	1.067	0.88529	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.764	1.067	0.99978	1.00000
RegenerationR2	0.226	1.067	0.70424	0.95780
RegenerationR3	-1.148	1.067	0.21955	0.65607
RegenerationR4	-3.736	1.067	0.01750	0.20761
RegenerationR5	-0.738	1.067	0.29516	0.72263
RegenerationR6	-0.792	1.067	0.35936	0.70398
RegenerationBL	0.979	1.067	0.50973	0.87348
RegenerationTP	-5.118	1.067	0.99952	1.00000

Genes with expression patterns similar to MligTC455_27707

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27707	30	0.61	Mlig455_056161	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.572	TCTN1	4	1.000	-	-	1.000	1.000	1.000	Mlig455_056161 {REF} {Length: 3279} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=167.9]} {Human: ENSG00000204852, TCTN1, tectonic family member 1, [RH, Score=142, Expect=3e-35]} {Mouse: ENSMUSG00000038593, Tctn1, tectonic family member 1, [RH, Score=131, Expect=6e-32]} {Smed: dd_Smed_v6_11225_0_1, dd_Smed_v6_11225_0_1, [RH, Score=73.6, Expect=5e-14]} {RNA1509_56923} {RNA1310_313} {RNA815_1107}
2.	MligTC455_10375	17	0.35	Mlig455_066826	Neo: - Age: -		0.97	0.970	-	-	-	-	-	Mlig455_066826 {REF} {Length: 668} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_65491} {RNA815_10554.1}
3.	MligTC455_36311	120	2.5	Mlig455_058304	Neo: - Age: -		0.966	0.966	-	-	-	-	-	Mlig455_058304 {REF} {Length: 2476} {Pfam: PH domain [PF00169.31, score=28.6]} {RNA1509_47709} {RNA1310_18559} {RNA815_4675.1}
4.	MligTC455_51127	32	0.66	Mlig455_054349	Neo: - Age: -	GLRA2	0.964	-	-	-	-	-	0.964	Mlig455_054349 {REF} {Length: 2070} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=108.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=317, Expect=6e-102]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=1e-101]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=3e-100]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=316, Expect=1e-101]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=308, Expect=1e-98]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=3e-91]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=4e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=261, Expect=1e-80]} {RNA1310_34255} {RNA815_61641}
5.	MligTC455_23031	559	11.65	Mlig455_004920, Mlig455_019740	Neo: - Age: logFC(26M/2M)=0.748	NLK	0.957	0.957	-	-	-	-	-	Mlig455_004920 {REF} {Length: 2917} {Pfam: Protein kinase domain [PF00069.27, score=199.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=23.6]; Fungal protein kinase [PF17667.3, score=21.1]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=380, Expect=2e-126]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=380, Expect=1e-126]} {Dmel: FBgn0011817, nmo, nemo, [Score=369, Expect=7e-124]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=347, Expect=4e-115]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=350, Expect=3e-116]} {RNA1310_28916} {RNA815_34936} Mlig455_019740 {REF} {Length: 3316} {Pfam: Protein kinase domain [PF00069.27, score=199.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=22.2]; Fungal protein kinase [PF17667.3, score=21.2]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=367, Expect=9e-122]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=367, Expect=7e-122]} {Dmel: FBgn0011817, nmo, nemo, [Score=364, Expect=2e-122]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=344, Expect=3e-114]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=351, Expect=8e-117]} {RNA1310_28916} {RNA815_34936}
6.	MligTC455_28416	134	2.78	Mlig455_031360, Mlig455_056514	Neo: - Age: -		0.957	0.957	-	-	-	-	-	Mlig455_031360 {REF} {Length: 267} {NoTransDecoderORF} {RNA1509_28242} {RNA1310_101668} {RNA815_48361} Mlig455_056514 {REF} {Length: 3270} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
7.	MligTC455_10341	15	0.32	Mlig455_012927	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_012927 {REF} {Length: 697} {RNA1509_52329} {RNA1310_58743.2} {RNA815_30339}
8.	MligTC455_15021	132	2.74	Mlig455_006178, Mlig455_053300	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_006178 {REF} {Length: 156} {NoTransDecoderORF} {RNA1310_37672} Mlig455_053300 {REF} {Length: 367} {NoTransDecoderORF} {RNA1310_37672}

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