Data search


search
Exact
Search

Results for MligTC455_15136

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15136 208 4.33 Mlig455_000802

Neo: -

Age: Up-Down-Down

RALGPS2 Mlig455_000802 {REF} {Length: 4105} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=144.2]} {Human: ENSG00000116191, RALGPS2, Ral GEF with PH domain and SH3 binding motif 2, [Score=250, Expect=4e-73]; ENSG00000136828, RALGPS1, Ral GEF with PH domain and SH3 binding motif 1, [Score=249, Expect=7e-75]} {Mouse: ENSMUSG00000026594, Ralgps2, Ral GEF with PH domain and SH3 binding motif 2, [Score=249, Expect=4e-74]; ENSMUSG00000038831, Ralgps1, Ral GEF with PH domain and SH3 binding motif 1, [Score=245, Expect=1e-71]} {Dmel: FBgn0034158, CG5522, [Score=236, Expect=4e-67]} {Celegans: WBGene00017891, rgl-1, Ral GDS-Like, [Score=72.8, Expect=6e-13]} {Smed: dd_Smed_v6_9244_0_1, dd_Smed_v6_9244_0_1, [RH, Score=208, Expect=4e-56]} {RNA1509_15882} {RNA1310_10455, RNA1509_15882} {RNA1509_15882, RNA815_18407}

Cumulative graph for MligTC455_15136

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.893 2.563 0.52941 1.00000
RegionR2 1.469 2.563 0.07650 0.33803
RegionR3 0.27 2.563 0.69238 1.00000
RegionR4 -2.092 2.563 0.00949 0.05872
RegionR5 -0.889 2.563 0.14260 0.38975
RegionR6 0.231 2.563 0.71484 1.00000
RegionR7 0.638 2.563 0.41698 1.00000
RegionR8 1.265 2.563 0.15676 0.71769

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.307 2.563 0.47265 1.00000
RegenerationR2 -0.608 2.563 0.41286 0.82247
RegenerationR3 -0.342 2.563 0.70125 0.94789
RegenerationR4 0.233 2.563 0.77944 0.98017
RegenerationR5 0.294 2.563 0.69598 0.95015
RegenerationR6 0.086 2.563 0.91712 1.00000
RegenerationBL -0.096 2.563 0.92367 1.00000
RegenerationTP 0.608 2.563 0.49487 0.89797


Genes with expression patterns similar to MligTC455_15136

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15136 208 4.33 Mlig455_000802

Neo: -

Age: Up-Down-Down

RALGPS2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_000802 {REF} {Length: 4105} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=144.2]} {Human: ENSG00000116191, RALGPS2, Ral GEF with PH domain and SH3 binding motif 2, [Score=250, Expect=4e-73]; ENSG00000136828, RALGPS1, Ral GEF with PH domain and SH3 binding motif 1, [Score=249, Expect=7e-75]} {Mouse: ENSMUSG00000026594, Ralgps2, Ral GEF with PH domain and SH3 binding motif 2, [Score=249, Expect=4e-74]; ENSMUSG00000038831, Ralgps1, Ral GEF with PH domain and SH3 binding motif 1, [Score=245, Expect=1e-71]} {Dmel: FBgn0034158, CG5522, [Score=236, Expect=4e-67]} {Celegans: WBGene00017891, rgl-1, Ral GDS-Like, [Score=72.8, Expect=6e-13]} {Smed: dd_Smed_v6_9244_0_1, dd_Smed_v6_9244_0_1, [RH, Score=208, Expect=4e-56]} {RNA1509_15882} {RNA1310_10455, RNA1509_15882} {RNA1509_15882, RNA815_18407}
2. MligTC455_47747 1085 22.6 Mlig455_018594

Neo: -

Age: -

Region-enriched R5: 1.797/0.00282

TMEM243 0.973 - - - - 0.973 - Mlig455_018594 {REF} {Length: 1402} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF2678) [PF10856.10, score=135.3]} {Human: ENSG00000135185, TMEM243, transmembrane protein 243, [RH, Score=125, Expect=3e-38]} {Mouse: ENSMUSG00000079659, Tmem243, transmembrane protein 243, mitochondrial, [RH, Score=111, Expect=9e-33]} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1310_25206.1, RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400} {RNA1509_19411, RNA1509_28627, RNA1509_52894, RNA1509_55931, RNA1509_57400, RNA815_6775.1}
3. MligTC455_28055 19 0.41 Mlig455_048300, Mlig455_048327, Mlig455_048344

Neo: -

Age: -

MARK2, MARK4 0.959 - - - 0.959 - -

Mlig455_048300 {REF} {Length: 2504} {Pfam: Protein kinase domain [PF00069.27, score=157.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.8]; Kinase-like [PF14531.8, score=21.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.4]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=158, Expect=1e-39]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=157, Expect=2e-39]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=152, Expect=7e-38]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=152, Expect=2e-37]; ENSG00000074590, NUAK1, NUAK family kinase 1, [Score=151, Expect=1e-37]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=158, Expect=8e-40]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=156, Expect=3e-39]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=152, Expect=8e-38]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=151, Expect=7e-38]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=151, Expect=4e-37]; ENSMUSG00000020032, Nuak1, NUAK family, SNF1-like kinase, 1, [Score=151, Expect=1e-37]} {Dmel: FBgn0026064, KP78a, [Score=156, Expect=2e-39]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=163, Expect=4e-41]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=317, Expect=1e-97]} {RNA1310_58898} {RNA815_35373}

Mlig455_048327 {REF} {Length: 2998} {Pfam: Protein kinase domain [PF00069.27, score=157.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.7]; Kinase-like [PF14531.8, score=21.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.3]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=159, Expect=1e-39]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=159, Expect=6e-40]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=153, Expect=5e-38]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=153, Expect=2e-37]; ENSG00000074590, NUAK1, NUAK family kinase 1, [Score=152, Expect=1e-37]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=159, Expect=7e-40]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=157, Expect=2e-39]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=152, Expect=5e-38]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=152, Expect=5e-38]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=152, Expect=3e-37]} {Dmel: FBgn0026064, KP78a, [Score=157, Expect=9e-40]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=164, Expect=2e-41]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=318, Expect=1e-97]} {RNA1310_58898} {RNA815_35373}

Mlig455_048344 {REF} {Length: 2992} {Pfam: Protein kinase domain [PF00069.27, score=216.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.0]; Kinase-like [PF14531.8, score=22.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=213, Expect=1e-58]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=212, Expect=6e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=207, Expect=3e-56]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=206, Expect=2e-54]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=212, Expect=3e-58]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=212, Expect=5e-58]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=207, Expect=3e-55]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=206, Expect=4e-56]} {Dmel: FBgn0026064, KP78a, [Score=213, Expect=1e-58]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=217, Expect=7e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [RH, Score=465, Expect=5e-154]} {RNA1310_58898} {RNA815_35373}
4. MligTC455_22103 166 3.47 Mlig455_062441

Neo: Int S/G2/M

Age: -

0.957 - - - - - 0.957 Mlig455_062441 {REF} {Length: 393} {NoTransDecoderORF} {RNA1509_41536} {RNA1310_30840.1} {RNA815_17486.1}
5. MligTC455_18913 17071 355.64 Mlig455_037252

Neo: Int S/G2/M

Age: -

BTF3 0.955 - - - - 0.955 - Mlig455_037252 {REF} {Length: 740} {TRANSSPLICED} {Pfam: NAC domain [PF01849.20, score=78.9]} {Human: ENSG00000145741, BTF3, basic transcription factor 3, [RH, Score=164, Expect=6e-52]; ENSG00000134717, BTF3L4, basic transcription factor 3 like 4, [RH, Score=158, Expect=2e-49]} {Mouse: ENSMUSG00000021660, Btf3, basic transcription factor 3, [RH, Score=164, Expect=4e-52]; ENSMUSG00000114133, Gm20075, predicted gene, 20075, [RH, Score=158, Expect=1e-49]; ENSMUSG00000028568, Btf3l4, basic transcription factor 3-like 4, [RH, Score=158, Expect=1e-49]} {Dmel: FBgn0031264, CG11835, [RH, Score=159, Expect=1e-45]} {Celegans: WBGene00002045, icd-1, Transcription factor BTF3 homolog, [RH, Score=174, Expect=2e-56]} {Smed: dd_Smed_v6_358_0_1, dd_Smed_v6_358_0_1, [RH, Score=181, Expect=7e-59]} {RNA1509_353} {RNA1310_48527, RNA1509_353} {RNA1509_353, RNA815_24381}
6. MligTC455_40990 33 0.69 Mlig455_028229

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_028229 {REF} {Length: 910} {NoTransDecoderORF} {RNA1509_31256} {RNA1310_2177} {RNA815_2763.1}
7. MligTC455_47978 338 7.05 Mlig455_029027

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.509

0.95 - - - - 0.950 - Mlig455_029027 {REF} {Length: 2509} {RNA1509_33577, RNA1509_55410} {RNA1310_26945, RNA1509_33577, RNA1509_55410} {RNA1509_33577, RNA1509_55410, RNA815_10135.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA