TomoSeq data search

Data search

Results for MligTC455_15190

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15190

94

1.97

Mlig455_041453, Mlig455_041498

Neo: -

Age: -

Mlig455_041453 {REF} {Length: 2347} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=25.7]; Proline-rich membrane anchor 1 [PF16101.7, score=22.8]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=177, Expect=2e-50]} {RNA1509_21593} {RNA1310_74216} {RNA815_59334}

Mlig455_041498 {REF} {Length: 1723} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=25.8]; Proline-rich membrane anchor 1 [PF16101.7, score=23.1]} {Dmel: FBgn0039747, AdoR, Adenosine receptor, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=177, Expect=2e-50]} {RNA1310_74216} {RNA815_59334}

Cumulative graph for MligTC455_15190

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	4.067	1.721	0.01520	0.34685
RegionR2	-1.365	1.721	0.16575	0.50958
RegionR3	-0.497	1.721	0.50607	0.99698
RegionR4	-0.373	1.721	0.72479	1.00000
RegionR5	-2.266	1.721	0.00416	0.03012
RegionR6	-1.283	1.721	0.11978	0.63092
RegionR7	1.71	1.721	0.04114	0.38850
RegionR8	0.005	1.721	0.99494	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.456	1.721	0.03857	0.65992
RegenerationR2	0.127	1.721	0.88314	1.00000
RegenerationR3	0.171	1.721	0.86564	1.00000
RegenerationR4	-1.459	1.721	0.14460	0.57011
RegenerationR5	0.78	1.721	0.39112	0.79323
RegenerationR6	-1.85	1.721	0.11056	0.41020
RegenerationBL	-1.152	1.721	0.34428	0.71126
RegenerationTP	-0.896	1.721	0.45158	0.86836

Genes with expression patterns similar to MligTC455_15190

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15190	94	1.97	Mlig455_041453, Mlig455_041498	Neo: - Age: -		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_041453 {REF} {Length: 2347} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=25.7]; Proline-rich membrane anchor 1 [PF16101.7, score=22.8]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=177, Expect=2e-50]} {RNA1509_21593} {RNA1310_74216} {RNA815_59334} Mlig455_041498 {REF} {Length: 1723} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=25.8]; Proline-rich membrane anchor 1 [PF16101.7, score=23.1]} {Dmel: FBgn0039747, AdoR, Adenosine receptor, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_8885_0_1, dd_Smed_v6_8885_0_1, [RH, Score=177, Expect=2e-50]} {RNA1310_74216} {RNA815_59334}
2.	MligTC455_15007	81	1.69	Mlig455_044466	Neo: - Age: - Region-enriched R7: 4.691/0.00001		1.748	-	-	0.960	-	-	0.788	Mlig455_044466 {REF} {Length: 470} {NoTransDecoderORF} {RNA1310_96814}
3.	MligTC455_39314	435	9.07	Mlig455_002301	Neo: - Age: -	SMOC1	1.72	-	-	-	-	0.752	0.968	Mlig455_002301 {REF} {Length: 3122} {Pfam: Thyroglobulin type-1 repeat [PF00086.20, score=84.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=50.3]; Kazal-type serine protease inhibitor domain [PF07648.17, score=38.6]; Kazal-type serine protease inhibitor domain [PF00050.23, score=36.4]; EF-hand domain [PF13405.8, score=34.2]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=29.6]; EF hand [PF13202.8, score=24.6]} {Human: ENSG00000198732, SMOC1, SPARC related modular calcium binding 1, [Score=79.7, Expect=4e-15]} {Mouse: ENSMUSG00000021136, Smoc1, SPARC related modular calcium binding 1, [Score=81.6, Expect=9e-16]} {Dmel: FBgn0262169, magu, [RH, Score=145, Expect=3e-36]} {RNA1509_16659, RNA1509_27208} {RNA1310_6756, RNA1509_27208} {RNA1509_27208, RNA815_13591}
4.	MligTC455_15537	31	0.64	Mlig455_008578	Neo: - Age: -	ARRDC3	0.986	-	-	-	0.986	-	-	Mlig455_008578 {REF} {Length: 3776} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=94.7]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=35.4]; Rgp1 [PF08737.12, score=18.2]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=107, Expect=8e-25]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=107, Expect=2e-25]} {Dmel: FBgn0037465, CG1105, [Score=70.5, Expect=7e-13]} {Celegans: WBGene00009579, arrd-6, ARRestin Domain protein, [Score=260, Expect=2e-82]} {RNA1509_26120} {RNA1310_31358} {RNA815_43917}
5.	MligTC455_14545	17	0.36	Mlig455_035976, Mlig455_047638	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_035976 {REF} {Length: 918} {RNA1310_117332} Mlig455_047638 {REF} {Length: 581} {NoTransDecoderORF} {RNA1310_117332}
6.	MligTC455_40853	532	11.08	Mlig455_053960, Mlig455_054029, Mlig455_066494	Neo: - Age: -		0.973	-	-	0.973	-	-	-	Mlig455_053960 {REF} {Length: 4087} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=31.0]} {Dmel: FBgn0053196, dpy, dumpy, [Score=132, Expect=2e-30]} {Celegans: WBGene00021290, clec-122, C-type LECtin, [Score=53.1, Expect=9e-07]} {RNA1509_57102} {RNA1310_18041} {RNA815_22869} Mlig455_054029 {REF} {Length: 3594} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=26.3]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=53.9, Expect=1e-06]} {RNA1509_57102} {RNA1310_31871.1} {RNA815_22869} Mlig455_066494 {REF} {Length: 3204} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=53.1]} {RNA1509_57102} {RNA1310_18041} {RNA815_22869}
7.	MligTC455_22779	18	0.37	Mlig455_047287, Mlig455_069329	Neo: - Age: -		0.971	-	-	-	0.971	-	-	Mlig455_047287 {REF} {Length: 1798} {RNA1509_49869} {RNA1310_2182} {RNA815_46359} Mlig455_069329 {REF} {Length: 1660} {RNA1509_49869} {RNA1310_2182} {RNA815_46359}
8.	MligTC455_45888	88	1.83	Mlig455_017836	Neo: Int S/G2/M Age: -		0.968	-	-	-	0.968	-	-	Mlig455_017836 {REF} {Length: 2048} {TRANSSPLICED} {RNA1509_40093} {RNA1310_27808.1, RNA1509_40093} {RNA1509_40093, RNA815_9172.1}
9.	MligTC455_37636	52	1.08	Mlig455_056163, Mlig455_058738	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.265		0.959	-	-	-	0.959	-	-	Mlig455_056163 {REF} {Length: 233} {NoTransDecoderORF} {RNA1310_37769} {RNA815_52459} Mlig455_058738 {REF} {Length: 2113} {NoTransDecoderORF} {RNA1509_34079} {RNA1310_61747} {RNA815_21592.1}
10.	MligTC455_24671	92	1.91	Mlig455_014396	Neo: - Age: -	TRHR	0.958	-	-	0.958	-	-	-	Mlig455_014396 {REF} {Length: 1582} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=63.3]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=28.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.0]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=54.3, Expect=2e-07]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=53.1, Expect=3e-07]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=68.2, Expect=4e-12]} {Smed: dd_Smed_v6_24805_0_1, dd_Smed_v6_24805_0_1, [RH, Score=216, Expect=1e-66]} {RNA1310_20543} {RNA815_8393}
11.	MligTC455_37446	42	0.88	Mlig455_030051	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_030051 {REF} {Length: 2066} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_33350} {RNA815_14978}
12.	MligTC455_40764	55	1.14	Mlig455_049519	Neo: Irradiation Age: -		0.956	-	-	-	-	-	0.956	Mlig455_049519 {REF} {Length: 587} {NoTransDecoderORF} {RNA1310_51284}
13.	MligTC455_39518	40	0.83	Mlig455_031401	Neo: - Age: -	CHRNA1	0.95	-	-	-	-	-	0.950	Mlig455_031401 {REF} {Length: 2411} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=92.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=76.4]} {Human: ENSG00000138435, CHRNA1, cholinergic receptor nicotinic alpha 1 subunit, [Score=120, Expect=3e-29]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=120, Expect=2e-29]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=115, Expect=2e-27]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=114, Expect=3e-27]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=134, Expect=2e-34]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=135, Expect=1e-34]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=124, Expect=5e-31]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=114, Expect=2e-27]} {RNA1509_53098} {RNA1310_67430} {RNA815_23438}

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