TomoSeq data search

Data search

Results for MligTC455_15270

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_15270	1504	31.33	Mlig455_043406, Mlig455_043424, Mlig455_043574	Neo: - Age: -	TMEM168	Mlig455_043406 {REF} {Length: 3848} {TRANSSPLICED} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=7e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_6995} {RNA1310_4604.1} {RNA815_2333} Mlig455_043424 {REF} {Length: 6586} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=9e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51165} {RNA1310_4604.1} {RNA815_2333} Mlig455_043574 {REF} {Length: 4899} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51024, RNA1509_6995} {RNA1310_4604.1, RNA1509_51024, RNA1509_6995} {RNA1509_51024, RNA1509_6995, RNA815_2333}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_15270

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.817	5.19	0.47992	1.00000
RegionR2	0.172	5.19	0.75297	1.00000
RegionR3	-0.192	5.19	0.65799	1.00000
RegionR4	1.036	5.19	0.04560	0.18124
RegionR5	0.38	5.19	0.34084	0.68811
RegionR6	0.132	5.19	0.75759	1.00000
RegionR7	-0.486	5.19	0.34065	0.97717
RegionR8	-0.225	5.19	0.68273	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.187	5.19	0.91782	1.00000
RegenerationR2	0.084	5.19	0.86098	1.00000
RegenerationR3	0.537	5.19	0.31874	0.74714
RegenerationR4	-0.374	5.19	0.48560	0.86162
RegenerationR5	0.409	5.19	0.41803	0.81013
RegenerationR6	0.594	5.19	0.24476	0.59271
RegenerationBL	0.773	5.19	0.13061	0.43088
RegenerationTP	-0.043	5.19	0.93865	1.00000

Genes with expression patterns similar to MligTC455_15270

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15270	1504	31.33	Mlig455_043406, Mlig455_043424, Mlig455_043574	Neo: - Age: -	TMEM168	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043406 {REF} {Length: 3848} {TRANSSPLICED} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=7e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_6995} {RNA1310_4604.1} {RNA815_2333} Mlig455_043424 {REF} {Length: 6586} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=9e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51165} {RNA1310_4604.1} {RNA815_2333} Mlig455_043574 {REF} {Length: 4899} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51024, RNA1509_6995} {RNA1310_4604.1, RNA1509_51024, RNA1509_6995} {RNA1509_51024, RNA1509_6995, RNA815_2333}
2.	MligTC455_03533	1245	25.93	Mlig455_068408	Neo: - Age: -	HMCN2	0.965	-	-	0.965	-	-	-	Mlig455_068408 {REF} {Length: 2467} {Pfam: Immunoglobulin domain [PF13927.8, score=98.3]; Immunoglobulin I-set domain [PF07679.18, score=73.4]; Immunoglobulin domain [PF00047.27, score=61.0]; Immunoglobulin domain [PF13895.8, score=59.7]; Immunoglobulin V-set domain [PF07686.19, score=51.1]; Immunoglobulin domain [PF18452.3, score=22.0]; CD47 immunoglobulin-like domain [PF08204.13, score=18.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=70.5, Expect=2e-12]; ENSG00000146555, SDK1, sidekick cell adhesion molecule 1, [Score=68.9, Expect=7e-12]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [Score=68.9, Expect=5e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=73.2, Expect=2e-13]} {Dmel: FBgn0052791, DIP-alpha, Dpr-interacting protein alpha, [RH, Score=84.7, Expect=2e-17]} {Celegans: WBGene00004372, rig-5, NeuRonal IGCAM, [Score=68.2, Expect=3e-12]} {Smed: dd_Smed_v6_3768_0_1, dd_Smed_v6_3768_0_1, [RH, Score=169, Expect=7e-49]} {RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1310_22774.1, RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1509_2740, RNA1509_31253, RNA1509_45147, RNA815_4345.1}
3.	MligTC455_44122	2079	43.3	Mlig455_055744, Mlig455_070953	Neo: - Age: - Regeneration-enriched R6: 1.876 Regeneration-enriched R3: 1.808	RSF1	0.953	-	-	-	-	0.953	-	Mlig455_055744 {REF} {Length: 6660} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=121, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=8e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=176, Expect=2e-44]} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA1509_8688} {RNA1310_1065.1, RNA1509_45252, RNA1509_58055, RNA1509_8090} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA815_778.1} Mlig455_070953 {REF} {Length: 6596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.3]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=7e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_45252} {RNA1310_1065.1} {RNA815_778.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_15270

1504

31.33

Mlig455_043406, Mlig455_043424, Mlig455_043574

Neo: -

Age: -

TMEM168

1.000

MligTC455_03533

1245

25.93

Mlig455_068408

Neo: -

Age: -

HMCN2

0.965

Mlig455_068408 {REF} {Length: 2467} {Pfam: Immunoglobulin domain [PF13927.8, score=98.3]; Immunoglobulin I-set domain [PF07679.18, score=73.4]; Immunoglobulin domain [PF00047.27, score=61.0]; Immunoglobulin domain [PF13895.8, score=59.7]; Immunoglobulin V-set domain [PF07686.19, score=51.1]; Immunoglobulin domain [PF18452.3, score=22.0]; CD47 immunoglobulin-like domain [PF08204.13, score=18.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=70.5, Expect=2e-12]; ENSG00000146555, SDK1, sidekick cell adhesion molecule 1, [Score=68.9, Expect=7e-12]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [Score=68.9, Expect=5e-12]; ENSG00000143341, HMCN1, hemicentin 1, [Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=73.2, Expect=2e-13]} {Dmel: FBgn0052791, DIP-alpha, Dpr-interacting protein alpha, [RH, Score=84.7, Expect=2e-17]} {Celegans: WBGene00004372, rig-5, NeuRonal IGCAM, [Score=68.2, Expect=3e-12]} {Smed: dd_Smed_v6_3768_0_1, dd_Smed_v6_3768_0_1, [RH, Score=169, Expect=7e-49]} {RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1310_22774.1, RNA1509_2740, RNA1509_31253, RNA1509_45147} {RNA1509_2740, RNA1509_31253, RNA1509_45147, RNA815_4345.1}

MligTC455_44122

2079

43.3

Mlig455_055744, Mlig455_070953

Neo: -

Age: -

Regeneration-enriched R6: 1.876
Regeneration-enriched R3: 1.808

RSF1

0.953

Mlig455_055744 {REF} {Length: 6660} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=121, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=8e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=176, Expect=2e-44]} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA1509_8688} {RNA1310_1065.1, RNA1509_45252, RNA1509_58055, RNA1509_8090} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA815_778.1}

Mlig455_070953 {REF} {Length: 6596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.3]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=7e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_45252} {RNA1310_1065.1} {RNA815_778.1}