Data search


search
Exact
Search

Results for MligTC455_44122

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44122 2079 43.30 Mlig455_055744, Mlig455_070953

Neo: -

Age: -

Regeneration-enriched R6: 1.876
Regeneration-enriched R3: 1.808

RSF1

Mlig455_055744 {REF} {Length: 6660} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=121, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=8e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=176, Expect=2e-44]} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA1509_8688} {RNA1310_1065.1, RNA1509_45252, RNA1509_58055, RNA1509_8090} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA815_778.1}

Mlig455_070953 {REF} {Length: 6596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.3]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=7e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_45252} {RNA1310_1065.1} {RNA815_778.1}

Cumulative graph for MligTC455_44122

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.114 5.51 0.07391 0.60168
RegionR2 -0.486 5.51 0.18502 0.53717
RegionR3 -1.523 5.51 0.00002 0.00138
RegionR4 0.362 5.51 0.31277 0.62798
RegionR5 0.393 5.51 0.17496 0.44766
RegionR6 -0.575 5.51 0.08693 0.54334
RegionR7 -0.394 5.51 0.34063 0.97717
RegionR8 1.109 5.51 0.00774 0.16324

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.272 5.51 0.02061 0.57159
RegenerationR2 0.698 5.51 0.04936 0.36686
RegenerationR3 1.808 5.51 0.00001 0.00220
RegenerationR4 0.736 5.51 0.05180 0.36592
RegenerationR5 0.658 5.51 0.06110 0.39285
RegenerationR6 1.876 5.51 0.00000 0.00053
RegenerationBL 0.765 5.51 0.03755 0.21939
RegenerationTP -0.259 5.51 0.53961 0.92578


Genes with expression patterns similar to MligTC455_44122

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44122 2079 43.3 Mlig455_055744, Mlig455_070953

Neo: -

Age: -

Regeneration-enriched R6: 1.876
Regeneration-enriched R3: 1.808

RSF1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_055744 {REF} {Length: 6660} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=121, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=8e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=176, Expect=2e-44]} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA1509_8688} {RNA1310_1065.1, RNA1509_45252, RNA1509_58055, RNA1509_8090} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA815_778.1}

Mlig455_070953 {REF} {Length: 6596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.3]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=7e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_45252} {RNA1310_1065.1} {RNA815_778.1}
2. MligTC455_27716 2493 51.93 Mlig455_002004, Mlig455_002097, Mlig455_002206

Neo: Int S/G2/M

Age: -

DDX56 3.251 - - 0.729 0.960 0.778 0.784

Mlig455_002004 {REF} {Length: 2518} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_16619} {RNA1310_7902, RNA1509_16619} {RNA1509_16619, RNA815_1492.1}

Mlig455_002097 {REF} {Length: 2699} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.5]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=471, Expect=4e-160]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=450, Expect=5e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=361, Expect=1e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=5e-132]} {RNA1509_10761, RNA1509_32998} {RNA1310_7902, RNA1509_10761, RNA1509_32998} {RNA1509_10761, RNA1509_32998, RNA815_1492.1}

Mlig455_002206 {REF} {Length: 2201} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_32998} {RNA1310_7902} {RNA815_1492.1}
3. MligTC455_39816 1716 35.75 Mlig455_033778

Neo: -

Age: -

G3BP2 2.548 - - - 0.970 0.780 0.798 Mlig455_033778 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]; ENSG00000145907, G3BP1, G3BP stress granule assembly factor 1, [RH, Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=1e-32]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=132, Expect=2e-34]} {RNA1509_3318, RNA1509_44632} {RNA1310_6247, RNA1509_3318, RNA1509_44632} {RNA1509_3318, RNA1509_44632, RNA815_17026}
4. MligTC455_39817 1535 31.98 Mlig455_033826

Neo: -

Age: -

G3BP2 2.51 - - - 0.962 0.768 0.780 Mlig455_033826 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=9e-33]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=134, Expect=3e-35]} {RNA1509_13282, RNA1509_45536, RNA1509_5980} {RNA1310_6247, RNA1509_13282, RNA1509_45536, RNA1509_5980} {RNA1509_13282, RNA1509_45536, RNA1509_5980, RNA815_6098.1}
5. MligTC455_42084 1828 38.07 Mlig455_001444

Neo: Int S/G2/M

Age: -

ETF1 2.5 - - 0.764 0.958 0.778 - Mlig455_001444 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: eRF1 domain 2 [PF03464.17, score=158.3]; eRF1 domain 3 [PF03465.17, score=129.0]; eRF1 domain 1 [PF03463.17, score=51.5]; Bacterial archaeo-eukaryotic release factor family 10 [PF18854.3, score=34.5]; Actinobacteria/chloroflexi VLRF1 release factor [PF18859.3, score=32.8]} {Human: ENSG00000120705, ETF1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000024360, Etf1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0036974, eRF1, eukaryotic translation release factor 1, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00020269, erfa-1, Eukaryotic peptide chain release factor subunit 1, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_5017_0_1, dd_Smed_v6_5017_0_1, [RH, Score=673, Expect=0.0]} {RNA1509_1928, RNA1509_30112} {RNA1310_2584.2, RNA1509_1928, RNA1509_30112} {RNA1509_1928, RNA1509_30112, RNA815_1129.1}
6. MligTC455_31390 703 14.64 Mlig455_036840, Mlig455_052979

Neo: -

Age: -

HNRNPUL1 1.85 - - - 0.894 0.956 -

Mlig455_036840 {REF} {Length: 3765} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=31.5]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=86.7, Expect=1e-16]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=85.9, Expect=2e-16]} {RNA1509_10194} {RNA1310_2966, RNA1509_10194} {RNA1509_10194, RNA815_2126}

Mlig455_052979 {REF} {Length: 3764} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=30.7]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=82.0, Expect=3e-15]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=80.9, Expect=5e-15]} {RNA1509_10194, RNA1509_43424, RNA1509_49388} {RNA1310_2966, RNA1509_43424, RNA1509_49388} {RNA1509_43424, RNA1509_49388, RNA815_2126}
7. MligTC455_45767 2880 60 Mlig455_021425

Neo: Neoblast

Age: logFC(26M/2M)=-0.139

Regeneration-upregulated BL: 1.120

Regeneration-enriched BL: 1.120

HSPA4L 1.793 - - - 0.954 0.839 - Mlig455_021425 {REF} {Length: 3672} {Pfam: Hsp70 protein [PF00012.22, score=546.6]; MreB/Mbl protein [PF06723.15, score=27.0]} {Human: ENSG00000164070, HSPA4L, heat shock protein family A (Hsp70) member 4 like, [RH, Score=741, Expect=0.0]; ENSG00000120694, HSPH1, heat shock protein family H (Hsp110) member 1, [RH, Score=733, Expect=0.0]; ENSG00000170606, HSPA4, heat shock protein family A (Hsp70) member 4, [RH, Score=723, Expect=0.0]} {Mouse: ENSMUSG00000025757, Hspa4l, heat shock protein 4 like, [RH, Score=748, Expect=0.0]; ENSMUSG00000115951, Hspa4l, heat shock protein 4 like, [RH, Score=748, Expect=0.0]; ENSMUSG00000029657, Hsph1, heat shock 105kDa/110kDa protein 1, [RH, Score=727, Expect=0.0]; ENSMUSG00000020361, Hspa4, heat shock protein 4, [RH, Score=725, Expect=0.0]} {Dmel: FBgn0026418, Hsc70Cb, [RH, Score=553, Expect=0.0]} {Celegans: WBGene00016250, hsp-110, Heat shock protein 110, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_1087_0_1, dd_Smed_v6_1087_0_1, [RH, Score=724, Expect=0.0]} {RNA1509_27621, RNA1509_27683, RNA1509_36994, RNA1509_44497, RNA1509_51479, RNA1509_780} {RNA1310_502.2, RNA1509_27621, RNA1509_27683, RNA1509_36994, RNA1509_44497, RNA1509_51479, RNA1509_780} {RNA1509_27621, RNA1509_27683, RNA1509_36994, RNA1509_44497, RNA1509_51479, RNA1509_780, RNA815_935}
8. MligTC455_44475 2592 54 Mlig455_006353, Mlig455_006402

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.652

Regeneration-enriched BL: 1.652

PLRG1 1.73 - - - 0.955 0.775 -

Mlig455_006353 {REF} {Length: 1600} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=150.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]; Nup133 N terminal like [PF08801.13, score=20.1]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.6]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=523, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=464, Expect=7e-162]} {RNA1509_33802, RNA1509_8487} {RNA1310_19706, RNA1509_33802, RNA1509_8487} {RNA1509_33802, RNA1509_8487, RNA815_8176}

Mlig455_006402 {REF} {Length: 1604} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=151.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.0]; Nup133 N terminal like [PF08801.13, score=20.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.4]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=525, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=468, Expect=3e-163]} {RNA1509_33802} {RNA1310_19706} {RNA815_8176}
9. MligTC455_16948 708 14.75 Mlig455_030592

Neo: -

Age: -

DDX51 1.656 - - - 0.951 0.705 - Mlig455_030592 {REF} {Length: 1836} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=104.2]; Helicase conserved C-terminal domain [PF00271.33, score=74.0]; AAA domain [PF13401.8, score=23.9]} {Human: ENSG00000185163, DDX51, DEAD-box helicase 51, [RH, Score=297, Expect=3e-92]} {Mouse: ENSMUSG00000029504, Ddx51, DEAD (Asp-Glu-Ala-Asp) box polypeptide 51, [RH, Score=296, Expect=4e-92]} {Dmel: FBgn0004556, Dbp73D, Dead box protein 73D, [RH, Score=257, Expect=4e-77]} {Celegans: WBGene00022792, ZK686.2, Putative ATP-dependent RNA helicase ZK686.2, [RH, Score=189, Expect=2e-52]} {Smed: dd_Smed_v6_12279_0_2, dd_Smed_v6_12279_0_2, [RH, Score=310, Expect=4e-99]} {RNA1509_15723, RNA1509_58505} {RNA1310_6602, RNA1509_15723, RNA1509_58505} {RNA1509_15723, RNA1509_58505, RNA815_6752}
10. MligTC455_28514 12909 268.93 Mlig455_020154

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.312

Region-enriched R5: 1.130/0.00016

0.97 - - - 0.970 - - Mlig455_020154 {REF} {Length: 1024} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=78.2]} {Celegans: WBGene00003990, pfn-2, Profilin-2, [Score=42.7, Expect=8e-06]} {RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839} {RNA1310_31962, RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839} {RNA1509_11294, RNA1509_1619, RNA1509_2181, RNA1509_5203, RNA1509_5839, RNA815_14957.1}
11. MligTC455_47882 920 19.18 Mlig455_014428

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.468/0.00366
Region-enriched R5: 1.389/0.00012

0.966 - - - 0.966 - - Mlig455_014428 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_12311} {RNA1310_13342} {RNA815_9722.1}
12. MligTC455_21899 846 17.63 Mlig455_040017

Neo: -

Age: -

AK2 0.959 - - 0.959 - - - Mlig455_040017 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=127.9]; AAA domain [PF13207.8, score=69.2]; Adenylate kinase, active site lid [PF05191.16, score=45.0]; AAA domain [PF13671.8, score=25.6]; Cytidylate kinase [PF02224.20, score=20.0]} {Human: ENSG00000004455, AK2, adenylate kinase 2, [Score=196, Expect=2e-62]} {Mouse: ENSMUSG00000028792, Ak2, adenylate kinase 2, [Score=189, Expect=3e-60]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=194, Expect=4e-62]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_3290_0_1, dd_Smed_v6_3290_0_1, [Score=191, Expect=2e-61]} {RNA1509_23430} {RNA1310_35054} {RNA815_20286}
13. MligTC455_41160 780 16.24 Mlig455_014918

Neo: -

Age: Down-Down-Up

RBBP6 0.957 - - - 0.957 - - Mlig455_014918 {REF} {Length: 5116} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=33.3]; U-box domain [PF04564.17, score=26.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.7]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.1, Expect=2e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=79.7, Expect=2e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=77.4, Expect=6e-14]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.2, Expect=3e-09]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [Score=53.1, Expect=8e-07]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}
14. MligTC455_12534 1611 33.55 Mlig455_046860

Neo: Int S/G2/M

Age: -

NOP53 0.956 - - 0.956 - - - Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216}
15. MligTC455_19667 1945 40.52 Mlig455_048916

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.226

METAP2 0.956 - - - 0.956 - - Mlig455_048916 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=151.8]} {Human: ENSG00000111142, METAP2, methionyl aminopeptidase 2, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000036112, Metap2, methionine aminopeptidase 2, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0283478, und, uninitiated, [RH, Score=563, Expect=0.0]} {Celegans: WBGene00003130, map-2, Methionine AminoPeptidase, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_2809_0_1, dd_Smed_v6_2809_0_1, [RH, Score=561, Expect=0.0]} {RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431} {RNA1310_15348, RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431} {RNA1509_21855, RNA1509_3506, RNA1509_35350, RNA1509_44852, RNA1509_47551, RNA1509_5949, RNA1509_6431, RNA815_5667}
16. MligTC455_35007 995 20.72 Mlig455_067944

Neo: -

Age: -

0.956 - - 0.956 - - - Mlig455_067944 {REF} {Length: 5148} {TRANSSPLICED} {Pfam: PIH1 CS-like domain [PF18201.3, score=24.2]} {Smed: dd_Smed_v6_9306_0_1, dd_Smed_v6_9306_0_1, [RH, Score=51.6, Expect=3e-07]} {RNA1509_25123} {RNA1310_13149.1, RNA1509_25123} {RNA1509_25123, RNA815_11266}
17. MligTC455_26336 865 18.01 Mlig455_045204

Neo: Int S/G2/M

Age: -

DUS3L 0.955 - - - 0.955 - - Mlig455_045204 {REF} {Length: 4331} {Pfam: Dihydrouridine synthase (Dus) [PF01207.19, score=169.6]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]; Exonuclease VII, large subunit [PF02601.17, score=19.7]} {Human: ENSG00000141994, DUS3L, dihydrouridine synthase 3 like, [RH, Score=465, Expect=4e-159]} {Mouse: ENSMUSG00000007603, Dus3l, dihydrouridine synthase 3-like (S. cerevisiae), [RH, Score=459, Expect=1e-153]} {Dmel: FBgn0032819, CG10463, [RH, Score=442, Expect=7e-148]} {Celegans: WBGene00021377, Y37E11B.5, tRNA-dihydrouridine(47) synthase [NAD(P)(+)], [RH, Score=366, Expect=4e-119]} {Smed: dd_Smed_v6_8477_0_1, dd_Smed_v6_8477_0_1, [Score=442, Expect=1e-148]} {RNA1509_51412} {RNA1310_18572.1} {RNA815_9098}
18. MligTC455_52830 508 10.58 Mlig455_066888

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.089/0.00951

0.954 - - - - 0.954 - Mlig455_066888 {REF} {Length: 6019} {TRANSSPLICED} {Pfam: AIMP2 lysyl-tRNA synthetase binding domain [PF16780.7, score=25.7]} {RNA1509_26768} {RNA1310_27753} {RNA815_13233.1}
19. MligTC455_15270 1504 31.33 Mlig455_043406, Mlig455_043424, Mlig455_043574

Neo: -

Age: -

TMEM168 0.953 - - - - 0.953 -

Mlig455_043406 {REF} {Length: 3848} {TRANSSPLICED} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=7e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_6995} {RNA1310_4604.1} {RNA815_2333}

Mlig455_043424 {REF} {Length: 6586} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=9e-42]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51165} {RNA1310_4604.1} {RNA815_2333}

Mlig455_043574 {REF} {Length: 4899} {Human: ENSG00000146802, TMEM168, transmembrane protein 168, [RH, Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000029569, Tmem168, transmembrane protein 168, [RH, Score=162, Expect=2e-41]} {RNA1509_51024, RNA1509_6995} {RNA1310_4604.1, RNA1509_51024, RNA1509_6995} {RNA1509_51024, RNA1509_6995, RNA815_2333}
20. MligTC455_42412 539 11.22 Mlig455_009847

Neo: -

Age: -

RAB21 0.953 - - 0.953 - - - Mlig455_009847 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=178.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=119.9]; ADP-ribosylation factor family [PF00025.23, score=45.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.4]} {Human: ENSG00000080371, RAB21, RAB21, member RAS oncogene family, [RH, Score=265, Expect=6e-90]} {Mouse: ENSMUSG00000020132, Rab21, RAB21, member RAS oncogene family, [RH, Score=266, Expect=8e-91]} {Dmel: FBgn0039966, Rab21, [Score=213, Expect=7e-70]} {Celegans: WBGene00004279, rab-21, RAB family, [RH, Score=200, Expect=5e-65]} {Smed: dd_Smed_v6_1863_0_1, dd_Smed_v6_1863_0_1, [Score=209, Expect=6e-69]} {RNA1509_29028, RNA1509_33419, RNA1509_41909} {RNA1310_17759, RNA1509_29028, RNA1509_33419, RNA1509_41909} {RNA1509_29028, RNA1509_33419, RNA1509_41909, RNA815_10475.1}
21. MligTC455_17376 103 2.15 Mlig455_020346

Neo: -

Age: -

0.952 - - 0.952 - - - Mlig455_020346 {REF} {Length: 1093} {NoTransDecoderORF} {RNA1310_106511}
22. MligTC455_22772 152 3.18 Mlig455_017300

Neo: -

Age: -

0.952 - - 0.952 - - - Mlig455_017300 {REF} {Length: 969} {NoTransDecoderORF} {RNA1310_73099} {RNA815_9413.5}
23. MligTC455_26406 6948 144.75 Mlig455_045949

Neo: -

Age: Down-Up-Down

0.952 - - 0.952 - - - Mlig455_045949 {REF} {Length: 2515} {RNA1509_289} {RNA1310_15978.1} {RNA815_2865.1}
24. MligTC455_29541 402 8.37 Mlig455_063794

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.426

0.952 - - 0.952 - - - Mlig455_063794 {REF} {Length: 3462} {TRANSSPLICED} {RNA1310_21809} {RNA815_37693}
25. MligTC455_50661 79 1.64 Mlig455_059106

Neo: -

Age: -

0.952 - - 0.952 - - - Mlig455_059106 {REF} {Length: 711} {NoTransDecoderORF} {RNA1310_39553.1} {RNA815_32589}
26. MligTC455_47603 333 6.93 Mlig455_019299

Neo: -

Age: -

0.951 - - - - - 0.951 Mlig455_019299 {REF} {Length: 2667} {NoTransDecoderORF} {RNA1509_35991} {RNA1310_34204.1} {RNA815_38960}
27. MligTC455_50885 570 11.88 Mlig455_033503

Neo: -

Age: Down-Down-Up

EIF5 0.95 - - - - 0.950 - Mlig455_033503 {REF} {Length: 2491} {Pfam: eIF4-gamma/eIF5/eIF2-epsilon [PF02020.20, score=65.1]; Domain found in IF2B/IF5 [PF01873.19, score=37.0]} {Human: ENSG00000100664, EIF5, eukaryotic translation initiation factor 5, [Score=141, Expect=8e-37]} {Mouse: ENSMUSG00000021282, Eif5, eukaryotic translation initiation factor 5, [Score=135, Expect=5e-35]} {Dmel: FBgn0030719, eIF5, eukaryotic translation initiation factor 5, [Score=164, Expect=2e-45]} {Celegans: WBGene00016496, C37C3.2, Eukaryotic translation initiation factor 5, [Score=117, Expect=1e-28]} {Smed: dd_Smed_v6_2034_0_1, dd_Smed_v6_2034_0_1, [Score=129, Expect=5e-33]} {RNA1509_1789} {RNA1310_7169} {RNA815_2159.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA