TomoSeq data search

Data search

Results for MligTC455_15335

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15335

133

2.77

Mlig455_046998

Neo: -

Age: -

TUBD1

Mlig455_046998 {REF} {Length: 1973} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=101.2]} {Human: ENSG00000108423, TUBD1, tubulin delta 1, [Score=135, Expect=1e-35]} {Mouse: ENSMUSG00000020513, Tubd1, tubulin, delta 1, [Score=108, Expect=1e-25]} {Dmel: FBgn0260639, gammaTub23C, gamma-Tubulin at 23C, [Score=92.4, Expect=3e-20]} {Celegans: WBGene00003171, mec-7, Tubulin beta-1 chain, [Score=60.5, Expect=6e-10]} {Smed: dd_Smed_v6_19202_0_1, dd_Smed_v6_19202_0_1, [RH, Score=132, Expect=1e-34]} {RNA1509_16490} {RNA1310_27438} {RNA815_22139}

Cumulative graph for MligTC455_15335

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.009	2.258	0.54843	1.00000
RegionR2	1.959	2.258	0.02614	0.18156
RegionR3	0.286	2.258	0.63380	1.00000
RegionR4	-1.269	2.258	0.15662	0.41110
RegionR5	-0.704	2.258	0.22324	0.52613
RegionR6	0.046	2.258	0.93741	1.00000
RegionR7	-1.381	2.258	0.29355	0.92810
RegionR8	2.071	2.258	0.03244	0.35330

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.241	2.258	0.72270	1.00000
RegenerationR2	-0.727	2.258	0.38139	0.80237
RegenerationR3	0.702	2.258	0.37621	0.78800
RegenerationR4	0.148	2.258	0.84215	1.00000
RegenerationR5	0.502	2.258	0.49316	0.85489
RegenerationR6	0.495	2.258	0.58067	0.85791
RegenerationBL	1.632	2.258	0.13304	0.43460
RegenerationTP	1.499	2.258	0.17212	0.60445

Genes with expression patterns similar to MligTC455_15335

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15335	133	2.77	Mlig455_046998	Neo: - Age: -	TUBD1	4	1.000	1.000	-	-	1.000	1.000	Mlig455_046998 {REF} {Length: 1973} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=101.2]} {Human: ENSG00000108423, TUBD1, tubulin delta 1, [Score=135, Expect=1e-35]} {Mouse: ENSMUSG00000020513, Tubd1, tubulin, delta 1, [Score=108, Expect=1e-25]} {Dmel: FBgn0260639, gammaTub23C, gamma-Tubulin at 23C, [Score=92.4, Expect=3e-20]} {Celegans: WBGene00003171, mec-7, Tubulin beta-1 chain, [Score=60.5, Expect=6e-10]} {Smed: dd_Smed_v6_19202_0_1, dd_Smed_v6_19202_0_1, [RH, Score=132, Expect=1e-34]} {RNA1509_16490} {RNA1310_27438} {RNA815_22139}
2.	MligTC455_15334	131	2.72	Mlig455_046997	Neo: - Age: -		3.932	1.000	1.000	-	-	0.936	0.996	Mlig455_046997 {REF} {Length: 876} {NoTransDecoderORF} {RNA1509_16490} {RNA1310_97896} {RNA815_60250}
3.	MligTC455_11634	146	3.04	Mlig455_012776	Neo: - Age: -		0.971	-	-	-	-	-	0.971	Mlig455_012776 {REF} {Length: 1216} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14401} {RNA1310_29512} {RNA815_34442}
4.	MligTC455_34804	296	6.17	Mlig455_006896	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_006896 {REF} {Length: 7567} {TRANSSPLICED} {Smed: dd_Smed_v6_9784_0_3, dd_Smed_v6_9784_0_3, [RH, Score=75.9, Expect=2e-13]} {RNA1509_29125, RNA1509_4353} {RNA1310_2901, RNA1509_29125} {RNA1509_29125, RNA815_843}
5.	MligTC455_48463	376	7.83	Mlig455_014300	Neo: - Age: - Region-enriched R1: 5.353/0.02734 Region-enriched R4: 3.271/0.00124 Regeneration-upregulated BL: 4.180 Regeneration-enriched BL: 4.180	WASHC1	0.955	-	-	-	-	0.955	-	Mlig455_014300 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=156.2]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=152, Expect=3e-40]} {Dmel: FBgn0033692, wash, washout, [RH, Score=92.8, Expect=7e-20]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=96.7, Expect=5e-22]} {RNA1509_20623} {RNA1310_37341} {RNA815_18278}
6.	MligTC455_53154	84	1.74	Mlig455_043500	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343}
7.	MligTC455_41212	267	5.57	Mlig455_058990	Neo: - Age: - Region-enriched R7: 3.930/0.00000		0.954	-	-	-	-	-	0.954	Mlig455_058990 {REF} {Length: 864} {NoTransDecoderORF} {RNA1509_28368} {RNA1310_8590.1} {RNA815_19858}
8.	MligTC455_25642	404	8.41	Mlig455_055674	Neo: - Age: logFC(26M/2M)=-0.267 Regeneration-downregulated BL: -3.906 Regeneration-depleted BL: -3.906	TRAF3	0.953	-	-	-	-	-	0.953	Mlig455_055674 {REF} {Length: 3425} {Pfam: TRAF-type zinc finger [PF02176.20, score=35.2]; Seven in absentia protein family [PF03145.18, score=32.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=68.9, Expect=2e-11]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=75.5, Expect=1e-13]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=72.0, Expect=1e-12]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_8046_0_1, dd_Smed_v6_8046_0_1, [Score=79.0, Expect=4e-15]} {RNA1509_45640} {RNA1310_11522} {RNA815_6004}
9.	MligTC455_29510	1443	30.06	Mlig455_003367, Mlig455_003369	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.360 Region-enriched R8: 1.897/0.00063 Region-enriched R7: 1.375/0.01086 Regeneration-downregulated BL: -2.492 Regeneration-depleted BL: -2.492		0.95	-	-	-	-	-	0.950	Mlig455_003367 {REF} {Length: 1906} {Pfam: Interferon-induced 6-16 family [PF06140.15, score=25.4]} {RNA1509_46297} {RNA1310_31671} {RNA815_28401} Mlig455_003369 {REF} {Length: 1024} {RNA1509_28087, RNA1509_46297} {RNA1310_31671, RNA1509_28087, RNA1509_46297} {RNA1509_28087, RNA1509_46297, RNA815_17641.1}

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