M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53154

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53154 84 1.74 Mlig455_043500

Neo: -

Age: -

 Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343}

Cumulative graph for MligTC455_53154

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 4.832 1.344 0.02740 0.43328
RegionR2 -3.094 1.344 0.99954 1.00000
RegionR3 -5.067 1.344 0.00072 0.02327
RegionR4 0.006 1.344 0.71060 0.99619
RegionR5 -1.044 1.344 0.95713 1.00000
RegionR6 -1.002 1.344 0.95045 1.00000
RegionR7 2.068 1.344 0.02764 0.31494
RegionR8 3.301 1.344 0.00133 0.05713

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.777 1.344 0.10946 0.83349
RegenerationR2 1.579 1.344 0.15606 0.59260
RegenerationR3 3.025 1.344 0.06999 0.44367
RegenerationR4 -0.202 1.344 0.93338 1.00000
RegenerationR5 -0.526 1.344 0.67120 0.94139
RegenerationR6 0.458 1.344 0.71554 0.93294
RegenerationBL -5.788 1.344 0.01467 0.12672
RegenerationTP -1.382 1.344 0.24615 0.69318


Genes with expression patterns similar to MligTC455_53154

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53154 84 1.74 Mlig455_043500

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343}
2. MligTC455_09672 621 12.93 Mlig455_014728

Neo: -

Age: -

Region-enriched R8: 6.672/0.00000
Region-enriched R7: 4.441/0.00000

 2.615 0.979 - - - 0.840 0.796 Mlig455_014728 {REF} {Length: 1151} {RNA1509_51461} {RNA1310_45054.1} {RNA815_17340}
3. MligTC455_06906 1854 38.62 Mlig455_010761

Neo: -

Age: Down-Up-Up

Region-specific R8: 8.047

Region-enriched R8: 7.100/0.00000
Region-enriched R7: 3.986/0.00000

 2.597 0.956 - - - 0.819 0.822 Mlig455_010761 {REF} {Length: 812} {RNA1509_21716} {RNA1310_48870, RNA1509_21716} {RNA1509_21716, RNA815_12215.2}
4. MligTC455_24496 662 13.79 Mlig455_038081

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.244

Region-enriched R8: 6.186/0.00000
Region-enriched R7: 5.495/0.00000
Region-enriched R6: 3.265/0.00016

 1.83 0.963 - - - 0.867 - Mlig455_038081 {REF} {Length: 1293} {RNA1509_9617} {RNA1310_33130} {RNA815_14842}
5. MligTC455_19604 102 2.12 Mlig455_039324

Neo: -

Age: -

 1.803 0.950 - - - - 0.853 Mlig455_039324 {REF} {Length: 2104} {RNA1509_38854} {RNA1310_17874} {RNA815_20097}
6. MligTC455_35611 39 0.81 Mlig455_041313

Neo: -

Age: -

 1.803 - - - - 0.958 0.845 Mlig455_041313 {REF} {Length: 518} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_49355.1} {RNA815_59105}
7. MligTC455_36215 359 7.47 Mlig455_060878

Neo: -

Age: -

Region-enriched R8: 8.367/0.00000
Region-enriched R7: 5.015/0.00000

 PLG 1.792 0.969 - - - - 0.823 Mlig455_060878 {REF} {Length: 5184} {Pfam: Kringle domain [PF00051.20, score=232.3]} {Human: ENSG00000122194, PLG, plasminogen, [Score=147, Expect=7e-36]} {Mouse: ENSMUSG00000059481, Plg, plasminogen, [Score=157, Expect=3e-39]} {Dmel: FBgn0020391, Nrk, Neurospecific receptor kinase, [Score=67.0, Expect=6e-11]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=66.2, Expect=7e-11]} {Smed: dd_Smed_v6_9220_0_1, dd_Smed_v6_9220_0_1, [RH, Score=247, Expect=5e-68]} {RNA1509_32537} {RNA1310_4321.1} {RNA815_8153}
8. MligTC455_54115 1122 23.38 Mlig455_046735, Mlig455_046741, Mlig455_046761, Mlig455_046824

Neo: -

Age: Up-Down-Down

Region-specific R8: 6.242

Region-enriched R8: 6.213/0.00000
Region-enriched R7: 3.304/0.00005

Regeneration-downregulated BL: -5.695

Regeneration-depleted BL: -5.695

 AVIL, VIL1 1.789 0.971 - - - - 0.818

Mlig455_046735 {REF} {Length: 3237} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=254.9]; Villin headpiece domain [PF02209.21, score=62.4]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=668, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=656, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=339, Expect=4e-104]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [Score=157, Expect=3e-39]} {Smed: dd_Smed_v6_1215_0_1, dd_Smed_v6_1215_0_1, [Score=157, Expect=4e-42]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_2416.1}

Mlig455_046741 {REF} {Length: 3667} {Pfam: Gelsolin repeat [PF00626.24, score=257.0]; Villin headpiece domain [PF02209.21, score=62.3]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=690, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=681, Expect=0.0]; ENSMUSG00000026175, Vil1, villin 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=362, Expect=4e-113]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=196, Expect=2e-54]} {Smed: dd_Smed_v6_929_0_1, dd_Smed_v6_929_0_1, [Score=179, Expect=1e-49]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_5185}

Mlig455_046761 {REF} {Length: 1969} {Pfam: Gelsolin repeat [PF00626.24, score=108.4]; Villin headpiece domain [PF02209.21, score=61.9]} {Human: ENSG00000127831, VIL1, villin 1, [Score=389, Expect=1e-130]; ENSG00000135407, AVIL, advillin, [Score=378, Expect=7e-123]} {Mouse: ENSMUSG00000026175, Vil1, villin 1, [Score=375, Expect=1e-121]; ENSMUSG00000025432, Avil, advillin, [Score=359, Expect=1e-115]} {Dmel: FBgn0003187, qua, quail, [Score=169, Expect=3e-45]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=102, Expect=2e-23]} {Smed: dd_Smed_v6_1673_0_1, dd_Smed_v6_1673_0_1, [Score=104, Expect=2e-24]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_2416.1}

Mlig455_046824 {REF} {Length: 3159} {Pfam: Gelsolin repeat [PF00626.24, score=257.2]; Villin headpiece domain [PF02209.21, score=63.9]} {Human: ENSG00000135407, AVIL, advillin, [RH, Score=691, Expect=0.0]; ENSG00000127831, VIL1, villin 1, [RH, Score=674, Expect=0.0]} {Mouse: ENSMUSG00000025432, Avil, advillin, [RH, Score=682, Expect=0.0]; ENSMUSG00000026175, Vil1, villin 1, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=365, Expect=3e-114]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=192, Expect=3e-53]} {Smed: dd_Smed_v6_929_0_1, dd_Smed_v6_929_0_1, [Score=179, Expect=1e-49]} {RNA1509_17120} {RNA1310_1438.1} {RNA815_5185}
9. MligTC455_41192 356 7.42 Mlig455_007850, Mlig455_007862

Neo: -

Age: -

Region-enriched R8: 6.065/0.01332

 1.787 0.960 - - - - 0.827

Mlig455_007850 {REF} {Length: 1184} {RNA1310_28844} {RNA815_36557}

Mlig455_007862 {REF} {Length: 1113} {RNA1310_28844} {RNA815_36557}
10. MligTC455_07107 177 3.68 Mlig455_037410

Neo: -

Age: -

Region-enriched R8: 7.446/0.00923

 1.78 0.963 - - - - 0.817 Mlig455_037410 {REF} {Length: 2565} {RNA1509_34967} {RNA1310_16201, RNA1509_34967} {RNA1509_34967, RNA815_28129}
11. MligTC455_07051 26 0.54 Mlig455_024162, Mlig455_047642

Neo: -

Age: -

 1.779 - - - - 0.993 0.786

Mlig455_024162 {REF} {Length: 2495} {Pfam: SET domain [PF00856.30, score=35.1]; C2H2-type zinc-finger domain [PF13909.8, score=22.1]} {RNA1310_131883} {RNA815_45891}

Mlig455_047642 {REF} {Length: 799} {RNA1310_131883}
12. MligTC455_38585 271 5.64 Mlig455_049023, Mlig455_051567

Neo: -

Age: Down-Up-Down

 1.774 0.954 - - - - 0.820

Mlig455_049023 {REF} {Length: 1479} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1}

Mlig455_051567 {REF} {Length: 1403} {RNA1509_39410} {RNA1310_55738} {RNA815_31370.1}
13. MligTC455_53573 220 4.58 Mlig455_033230

Neo: -

Age: logFC(26M/2M)=-0.512

Region-enriched R8: 7.203/0.00000
Region-enriched R7: 4.245/0.02326

 LMNB1 1.762 0.964 - - - - 0.798 Mlig455_033230 {REF} {Length: 2512} {Pfam: Intermediate filament protein [PF00038.23, score=183.5]; Lamin Tail Domain [PF00932.21, score=45.5]; Septation ring formation regulator, EzrA [PF06160.14, score=24.2]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=181, Expect=5e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=2e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=8e-49]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=8e-46]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=2e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=404, Expect=3e-134]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1}
14. MligTC455_52535 224 4.67 Mlig455_062931

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.489

Region-enriched R8: 4.408/0.00044

 1.742 0.958 - - - - 0.784 Mlig455_062931 {REF} {Length: 1681} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=23.6]} {RNA1509_34446} {RNA1310_34000, RNA1509_34446} {RNA1509_34446, RNA815_53478}
15. MligTC455_25487 73 1.52 Mlig455_006779

Neo: -

Age: -

 TTC28 1.7 - - - 0.742 - 0.958 Mlig455_006779 {REF} {Length: 5941} {Pfam: Tetratricopeptide repeat [PF13424.8, score=84.4]; Tetratricopeptide repeat [PF13176.8, score=56.0]; Tetratricopeptide repeat [PF07719.19, score=55.9]; Tetratricopeptide repeat [PF00515.30, score=48.2]; Tetratricopeptide repeat [PF13181.8, score=43.2]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=97.4, Expect=2e-19]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=97.8, Expect=9e-20]} {Dmel: FBgn0262719, CG43163, [Score=98.6, Expect=4e-20]} {RNA1509_24017} {RNA1310_15919} {RNA815_6453}
16. MligTC455_40246 131 2.73 Mlig455_047354

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.326/0.00006
Region-enriched R7: 2.898/0.01364

 1.691 0.955 - - - - 0.736 Mlig455_047354 {REF} {Length: 1853} {RNA1310_23716}
17. MligTC455_52981 216 4.5 Mlig455_040266, Mlig455_040275

Neo: -

Age: -

 IPMK 1.69 - - - 0.724 0.966 -

Mlig455_040266 {REF} {Length: 2596} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.2]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [RH, Score=127, Expect=3e-32]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=120, Expect=7e-30]} {Dmel: FBgn0031267, Ipk2, [Score=105, Expect=4e-25]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=129, Expect=2e-34]} {RNA1509_12297} {RNA1310_12275} {RNA815_4311}

Mlig455_040275 {REF} {Length: 2517} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.7]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [Score=119, Expect=1e-29]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=119, Expect=3e-30]} {Dmel: FBgn0031267, Ipk2, [Score=99.8, Expect=1e-23]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=117, Expect=1e-30]} {RNA1509_12297, RNA1509_57864} {RNA1310_13642, RNA1509_57864} {RNA1509_57864, RNA815_4311}
18. MligTC455_09112 179 3.73 Mlig455_032061

Neo: -

Age: Down-Up-Up

 1.672 0.717 - - - 0.955 - Mlig455_032061 {REF} {Length: 945} {RNA1509_33478} {RNA1310_75644} {RNA815_39109}
19. MligTC455_47088 3826 79.71 Mlig455_027638

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.552

Region-enriched R8: 6.838/0.00000
Region-enriched R7: 4.443/0.00000

 CALML6 1.664 0.954 - - - - 0.710 Mlig455_027638 {REF} {Length: 788} {Pfam: EF-hand domain pair [PF13499.8, score=77.1]; EF hand [PF00036.34, score=76.3]; EF-hand domain [PF13405.8, score=63.9]; EF hand [PF13202.8, score=54.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.3]; EF-hand domain [PF14658.8, score=25.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=23.3]; EF-hand domain pair [PF13833.8, score=21.6]} {Human: ENSG00000169885, CALML6, calmodulin like 6, [Score=53.9, Expect=8e-09]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=52.4, Expect=2e-08]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=50.8, Expect=5e-08]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=50.8, Expect=5e-08]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=50.4, Expect=6e-08]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.1, Expect=3e-07]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=50.4, Expect=5e-08]} {Smed: dd_Smed_v6_299_0_1, dd_Smed_v6_299_0_1, [RH, Score=99.8, Expect=4e-27]} {RNA1509_8844} {RNA1310_30724} {RNA815_14702}
20. MligTC455_50135 745 15.51 Mlig455_009180, Mlig455_009608

Neo: -

Age: logFC(26M/2M)=-0.712

Region-enriched R4: 2.262/0.00372

Regeneration-downregulated BL: -3.226

Regeneration-depleted BL: -3.226

 1.658 - - - - 0.955 0.703

Mlig455_009180 {REF} {Length: 2128} {RNA1310_31163} {RNA815_15301.1}

Mlig455_009608 {REF} {Length: 7395} {RNA1509_11387} {RNA1310_25721} {RNA815_15301.1}
21. MligTC455_24842 107 2.23 Mlig455_014634

Neo: -

Age: -

 TRPM1 0.981 0.981 - - - - - Mlig455_014634 {REF} {Length: 8505} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=177.3]; Ankyrin repeats (many copies) [PF13637.8, score=126.8]; Ankyrin repeats (many copies) [PF13857.8, score=56.3]; Ankyrin repeat [PF13606.8, score=49.4]; Domain of unknown function (DUF4158) [PF13700.8, score=40.6]; Ankyrin repeat [PF00023.32, score=34.3]; RlmM ferredoxin-like domain [PF18125.3, score=23.5]; HMGL-like [PF00682.21, score=22.1]; Ion transport protein [PF00520.33, score=19.8]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=89.7, Expect=5e-17]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=89.4, Expect=6e-17]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=87.4, Expect=2e-16]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=90.5, Expect=2e-17]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=89.0, Expect=5e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=70.1, Expect=2e-11]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=65.9, Expect=4e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=114, Expect=2e-25]} {RNA1509_6015} {RNA1310_1769} {RNA815_7984}
22. MligTC455_00430 7 0.15 Mlig455_007037

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_007037 {REF} {Length: 320} {NoTransDecoderORF} {RNA1509_34772} {RNA1310_63289} {RNA815_33097}
23. MligTC455_31207 43 0.9 Mlig455_002822

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_002822 {REF} {Length: 1058} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=50.4, Expect=2e-08]} {RNA1310_66267} {RNA815_45185}
24. MligTC455_31294 10 0.22 Mlig455_001125

Neo: -

Age: -

 UNC13B 0.976 - - - - 0.976 - Mlig455_001125 {REF} {Length: 5628} {Pfam: MUN domain [PF06292.19, score=428.5]; C2 domain [PF00168.32, score=131.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=39.3]} {Human: ENSG00000198722, UNC13B, unc-13 homolog B, [Score=1519, Expect=0.0]; ENSG00000130477, UNC13A, unc-13 homolog A, [Score=1484, Expect=0.0]} {Mouse: ENSMUSG00000028456, Unc13b, unc-13 homolog B, [Score=1525, Expect=0.0]; ENSMUSG00000034799, Unc13a, unc-13 homolog A, [Score=1480, Expect=0.0]} {Dmel: FBgn0025726, unc-13, [Score=1568, Expect=0.0]} {Celegans: WBGene00006752, unc-13, Phorbol ester/diacylglycerol-binding protein unc-13, [Score=1419, Expect=0.0]} {Smed: dd_Smed_v6_11981_0_1, dd_Smed_v6_11981_0_1, [Score=1603, Expect=0.0]} {RNA1509_26025} {RNA1310_3088} {RNA815_2203}
25. MligTC455_40586 16 0.33 Mlig455_069787

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_069787 {REF} {Length: 931} {NoTransDecoderORF} {RNA1310_29562} {RNA815_33075}
26. MligTC455_45250 173 3.61 Mlig455_012405

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.370

Region-enriched R8: 4.444/0.04464

 0.972 0.972 - - - - - Mlig455_012405 {REF} {Length: 2733} {RNA1310_16550} {RNA815_17676}
27. MligTC455_01375 8 0.16 Mlig455_007546

Neo: -

Age: Down-Up-Up

 0.971 - - - - 0.971 - Mlig455_007546 {REF} {Length: 250} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_32884} {RNA815_3377}
28. MligTC455_47130 799 16.64 Mlig455_045674

Neo: -

Age: Down-Up-Down

Region-enriched R8: 3.665/0.00000
Region-enriched R7: 3.245/0.00000

 OVOL1 0.971 0.971 - - - - - Mlig455_045674 {REF} {Length: 2321} {Pfam: Zinc-finger double domain [PF13465.8, score=53.3]; Zinc finger, C2H2 type [PF00096.28, score=47.1]; C2H2-type zinc finger [PF13894.8, score=35.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=9e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=187, Expect=1e-57]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=3e-56]} {RNA1509_42049} {RNA1310_21041, RNA1509_42049} {RNA1509_42049, RNA815_8487.1}
29. MligTC455_53202 103 2.15 Mlig455_029289

Neo: -

Age: Up-Down-Up

 0.971 - - - - - 0.971 Mlig455_029289 {REF} {Length: 2563} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=40.6]} {Smed: dd_Smed_v6_2174_0_1, dd_Smed_v6_2174_0_1, [RH, Score=187, Expect=1e-57]} {RNA1310_39885} {RNA815_20444}
30. MligTC455_11257 114 2.38 Mlig455_001713

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_001713 {REF} {Length: 620} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_27830} {RNA815_13308}
31. MligTC455_00517 14 0.3 Mlig455_030063

Neo: -

Age: -

Regeneration-enriched R4: 7.437
Regeneration-enriched R3: 7.435
Regeneration-enriched R6: 7.315

 0.967 - - - - 0.967 - Mlig455_030063 {REF} {Length: 1513} {RNA1509_5594} {RNA1310_99804} {RNA815_59053.1}
32. MligTC455_24419 70 1.46 Mlig455_047741

Neo: -

Age: Up-Down-Down

 0.966 - - - - 0.966 - Mlig455_047741 {REF} {Length: 2422} {TRANSSPLICED} {RNA1310_34055} {RNA815_35919}
33. MligTC455_37574 30 0.63 Mlig455_032039

Neo: -

Age: -

 0.965 - - - 0.965 - - Mlig455_032039 {REF} {Length: 3799} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.5]} {Smed: dd_Smed_v6_13661_0_2, dd_Smed_v6_13661_0_2, [RH, Score=204, Expect=4e-64]} {RNA1509_50200} {RNA1310_35365.2} {RNA815_39051}
34. MligTC455_13298 94 1.96 Mlig455_049624

Neo: -

Age: -

 EEF1AKMT4-ECE2 0.962 - - - - - 0.962 Mlig455_049624 {REF} {Length: 2668} {Pfam: Peptidase family M13 [PF01431.23, score=131.9]; Peptidase family M13 [PF05649.15, score=85.2]} {Human: ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=160, Expect=4e-40]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=160, Expect=2e-40]; ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=153, Expect=6e-38]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=153, Expect=6e-38]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=163, Expect=2e-41]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=161, Expect=1e-40]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=161, Expect=7e-41]} {Dmel: FBgn0029843, Nep1, Neprilysin 1, [Score=156, Expect=3e-39]} {Celegans: WBGene00017842, nep-12, NEPrilysin metallopeptidase family, [Score=164, Expect=3e-42]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=165, Expect=1e-42]} {RNA1509_25699} {RNA1310_10216} {RNA815_29258}
35. MligTC455_00092 8 0.17 Mlig455_002951

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_002951 {REF} {Length: 188} {NoTransDecoderORF}
36. MligTC455_15334 131 2.72 Mlig455_046997

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_046997 {REF} {Length: 876} {NoTransDecoderORF} {RNA1509_16490} {RNA1310_97896} {RNA815_60250}
37. MligTC455_07504 85 1.77 Mlig455_001458

Neo: -

Age: -

 0.96 0.960 - - - - - Mlig455_001458 {REF} {Length: 4238} {RNA1310_78279}
38. MligTC455_13295 567 11.82 Mlig455_033272

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.649

Region-specific R7: 5.845
Region-specific R8: 5.837

Region-enriched R8: 5.734/0.00000
Region-enriched R7: 5.562/0.00000
Region-enriched R6: 2.488/0.01009

Regeneration-upregulated R3: 3.842

Regeneration-enriched R3: 3.842

 0.96 0.960 - - - - - Mlig455_033272 {REF} {Length: 1531} {RNA1509_39118} {RNA1310_21237, RNA1509_39118} {RNA1509_39118, RNA815_19007}
39. MligTC455_40762 76 1.58 Mlig455_071166

Neo: -

Age: -

Region-enriched R5: 2.583/0.01050

 0.959 - - - - - 0.959 Mlig455_071166 {REF} {Length: 851} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_96981.1} {RNA815_34070.1}
40. MligTC455_11226 171 3.57 Mlig455_010762

Neo: -

Age: -

Region-enriched R8: 5.355/0.00388

 0.958 0.958 - - - - - Mlig455_010762 {REF} {Length: 826} {RNA1509_21716} {RNA1310_48870} {RNA815_12215.2}
41. MligTC455_32725 87 1.8 Mlig455_018520

Neo: -

Age: logFC(26M/2M)=1.025

Region-enriched R3: 3.430/0.01178

 0.957 - - - - - 0.957 Mlig455_018520 {REF} {Length: 939} {RNA1509_55986} {RNA1310_40151} {RNA815_18212}
42. MligTC455_34082 171 3.57 Mlig455_003516

Neo: -

Age: Down-Up-Up

Region-enriched R8: 6.643/0.00000
Region-enriched R7: 3.603/0.03396

 0.957 0.957 - - - - - Mlig455_003516 {REF} {Length: 857} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50908} {RNA1310_60543} {RNA815_37583}
43. MligTC455_03042 13 0.27 Mlig455_061930

Neo: -

Age: Down-Up-Up

 0.956 - - - - 0.956 - Mlig455_061930 {REF} {Length: 1439} {RNA1509_28149} {RNA1310_13368} {RNA815_4817.1}
44. MligTC455_17709 29 0.61 Mlig455_020286

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_020286 {REF} {Length: 1301} {RNA1310_115899} {RNA815_28796}
45. MligTC455_22916 416 8.67 Mlig455_002448, Mlig455_002725, Mlig455_063340

Neo: -

Age: -

 CNOT6, CNOT6L 0.956 - - - 0.956 - -

Mlig455_002448 {REF} {Length: 3594} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=28.2]} {Human: ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=203, Expect=4e-58]; ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=200, Expect=6e-58]} {Mouse: ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=199, Expect=6e-57]; ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=198, Expect=2e-57]} {Dmel: FBgn0011725, twin, [Score=214, Expect=2e-62]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=170, Expect=1e-47]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=162, Expect=1e-43]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}

Mlig455_002725 {REF} {Length: 3721} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.4]} {Human: ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=286, Expect=2e-88]; ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=285, Expect=6e-88]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=285, Expect=4e-88]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=283, Expect=1e-87]} {Dmel: FBgn0011725, twin, [Score=307, Expect=7e-97]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=250, Expect=4e-77]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=258, Expect=4e-78]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}

Mlig455_063340 {REF} {Length: 4128} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=67.6]} {Human: ENSG00000138767, CNOT6L, CCR4-NOT transcription complex subunit 6 like, [Score=285, Expect=6e-88]; ENSG00000113300, CNOT6, CCR4-NOT transcription complex subunit 6, [Score=284, Expect=1e-87]} {Mouse: ENSMUSG00000034724, Cnot6l, CCR4-NOT transcription complex, subunit 6-like, [Score=283, Expect=1e-87]; ENSMUSG00000020362, Cnot6, CCR4-NOT transcription complex, subunit 6, [Score=282, Expect=4e-87]} {Dmel: FBgn0011725, twin, [Score=307, Expect=5e-97]} {Celegans: WBGene00000376, ccr-4, CCR (Yeast CCR4/NOT complex component) homolog; CCR4, [Score=254, Expect=2e-78]} {Smed: dd_Smed_v6_5045_0_1, dd_Smed_v6_5045_0_1, [Score=256, Expect=4e-77]} {RNA1509_32917} {RNA1310_10507} {RNA815_11288}
46. MligTC455_26047 280 5.83 Mlig455_061668

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_061668 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_47332} {RNA1310_41891, RNA1509_47332} {RNA1509_47332, RNA815_20265.1}
47. MligTC455_15335 133 2.77 Mlig455_046998

Neo: -

Age: -

 TUBD1 0.955 - - - - - 0.955 Mlig455_046998 {REF} {Length: 1973} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=101.2]} {Human: ENSG00000108423, TUBD1, tubulin delta 1, [Score=135, Expect=1e-35]} {Mouse: ENSMUSG00000020513, Tubd1, tubulin, delta 1, [Score=108, Expect=1e-25]} {Dmel: FBgn0260639, gammaTub23C, gamma-Tubulin at 23C, [Score=92.4, Expect=3e-20]} {Celegans: WBGene00003171, mec-7, Tubulin beta-1 chain, [Score=60.5, Expect=6e-10]} {Smed: dd_Smed_v6_19202_0_1, dd_Smed_v6_19202_0_1, [RH, Score=132, Expect=1e-34]} {RNA1509_16490} {RNA1310_27438} {RNA815_22139}
48. MligTC455_28247 129 2.69 Mlig455_066444

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_066444 {REF} {Length: 1369} {NoTransDecoderORF} {RNA1509_28645} {RNA1310_1112.1} {RNA815_8074.2}
49. MligTC455_51023 117 2.45 Mlig455_042608, Mlig455_042638

Neo: -

Age: -

Region-enriched R7: 5.859/0.00000

 0.955 - - - - 0.955 -

Mlig455_042608 {REF} {Length: 1963} {RNA1310_20305} {RNA815_32236}

Mlig455_042638 {REF} {Length: 1998} {RNA1310_20305} {RNA815_32236}
50. MligTC455_11572 12 0.25 Mlig455_003540

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_003540 {REF} {Length: 566} {Smed: dd_Smed_v6_16372_0_1, dd_Smed_v6_16372_0_1, [Score=40.8, Expect=5e-06]} {RNA1509_50632} {RNA1310_28846.1} {RNA815_50042}
51. MligTC455_43430 426 8.88 Mlig455_045021, Mlig455_069305

Neo: -

Age: Down-Down-Up

Region-enriched R8: 4.357/0.00000
Region-enriched R7: 4.140/0.00000

Regeneration-downregulated R6: -3.798

Regeneration-depleted R6: -3.798

 PRR9 0.954 0.954 - - - - -

Mlig455_045021 {REF} {Length: 355} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=1e-06]} {RNA1310_123465}

Mlig455_069305 {REF} {Length: 1356} {RNA1509_44215} {RNA1310_45964, RNA1509_44215} {RNA1509_44215, RNA815_28097}
52. MligTC455_45598 1174 24.46 Mlig455_020219

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.023/0.00000

 0.954 0.954 - - - - - Mlig455_020219 {REF} {Length: 4562} {RNA1509_16423} {RNA1310_11001} {RNA815_16188}
53. MligTC455_47087 7707 160.57 Mlig455_027628

Neo: -

Age: -

Region-specific R8: 7.073

Region-enriched R8: 6.753/0.00000
Region-enriched R7: 4.044/0.00000

 CALML6 0.954 0.954 - - - - - Mlig455_027628 {REF} {Length: 884} {Pfam: EF hand [PF00036.34, score=82.2]; EF-hand domain pair [PF13499.8, score=79.5]; EF-hand domain [PF13405.8, score=70.1]; EF hand [PF13202.8, score=64.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.5]; EF-hand domain [PF14658.8, score=30.6]; EF-hand domain pair [PF13833.8, score=28.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=22.0]} {Human: ENSG00000169885, CALML6, calmodulin like 6, [Score=58.2, Expect=4e-10]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=55.5, Expect=4e-09]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.1, Expect=5e-07]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [Score=53.9, Expect=4e-09]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=108, Expect=4e-30]} {RNA1509_8844} {RNA1310_30724} {RNA815_14702}
54. MligTC455_47131 1841 38.35 Mlig455_045626, Mlig455_045684

Neo: -

Age: Down-Up-Up

Region-enriched R8: 3.370/0.00000
Region-enriched R7: 3.254/0.00000

 OVOL1 0.954 0.954 - - - - -

Mlig455_045626 {REF} {Length: 1791} {Pfam: Zinc-finger double domain [PF13465.8, score=54.3]; Zinc finger, C2H2 type [PF00096.28, score=48.2]; C2H2-type zinc finger [PF13894.8, score=31.2]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [Score=172, Expect=2e-52]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=169, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=181, Expect=7e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=185, Expect=8e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=182, Expect=8e-57]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1}

Mlig455_045684 {REF} {Length: 1609} {Pfam: Zinc-finger double domain [PF13465.8, score=53.6]; Zinc finger, C2H2 type [PF00096.28, score=47.2]; C2H2-type zinc finger [PF13894.8, score=35.3]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=172, Expect=1e-51]} {Dmel: FBgn0003028, ovo, [Score=184, Expect=8e-52]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=188, Expect=5e-58]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=183, Expect=2e-56]} {RNA1509_42049} {RNA1310_21041} {RNA815_8487.1}
55. MligTC455_12073 22 0.46 Mlig455_060553

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_060553 {REF} {Length: 603} {NoTransDecoderORF} {RNA1509_56060} {RNA1310_56129.1} {RNA815_32101.1}
56. MligTC455_16221 370 7.7 Mlig455_033881

Neo: -

Age: -

Region-enriched R8: 3.263/0.00115
Region-enriched R7: 2.555/0.01207

 0.953 0.953 - - - - - Mlig455_033881 {REF} {Length: 1113} {RNA1310_29964} {RNA815_15923}
57. MligTC455_45713 66 1.38 Mlig455_039432

Neo: -

Age: Up-Down-Up

 0.953 - - - - 0.953 - Mlig455_039432 {REF} {Length: 2393} {TRANSSPLICED} {RNA1509_58805} {RNA1310_59132} {RNA815_31237}
58. MligTC455_12862 35 0.72 Mlig455_004283

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_004283 {REF} {Length: 1563} {Pfam: Immunoglobulin domain [PF13927.8, score=26.8]; Immunoglobulin domain [PF13895.8, score=23.8]} {RNA1509_37987} {RNA1310_55399} {RNA815_29559}
59. MligTC455_16149 59 1.22 Mlig455_059983

Neo: -

Age: logFC(26M/2M)=1.934

 KLHDC8A 0.952 - - - 0.952 - - Mlig455_059983 {REF} {Length: 1797} {Pfam: Kelch motif [PF13964.8, score=56.9]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=37.5]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=4e-63]} {RNA1509_58319} {RNA1310_20213} {RNA815_8052}
60. MligTC455_49578 920 19.17 Mlig455_042519

Neo: -

Age: logFC(26M/2M)=-0.236

Region-enriched R2: 1.433/0.00873

 ANO7 0.951 - - - 0.951 - - Mlig455_042519 {REF} {Length: 3579} {Pfam: Calcium-activated chloride channel [PF04547.14, score=222.4]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=30.6]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=120, Expect=3e-27]} {Dmel: FBgn0038721, subdued, [Score=117, Expect=2e-26]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=161, Expect=1e-40]} {Smed: dd_Smed_v6_6514_0_4, dd_Smed_v6_6514_0_4, [Score=126, Expect=2e-29]} {RNA1509_19842, RNA1509_21022, RNA1509_21269} {RNA1310_4099.1, RNA1509_19842, RNA1509_21022} {RNA1509_19842, RNA1509_21022, RNA815_1067}
61. MligTC455_13294 328 6.83 Mlig455_003811

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.593

Region-enriched R8: 5.701/0.00000
Region-enriched R7: 4.470/0.00000

 0.95 0.950 - - - - - Mlig455_003811 {REF} {Length: 1567} {RNA1509_39118} {RNA1310_21237} {RNA815_19007}
62. MligTC455_24662 42 0.88 Mlig455_047950

Neo: -

Age: -

 URGCP 0.95 - - - - 0.950 - Mlig455_047950 {REF} {Length: 5366} {Pfam: Dynamin family [PF00350.25, score=28.9]; Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.9]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=24.2]; 50S ribosome-binding GTPase [PF01926.25, score=22.3]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=155, Expect=8e-38]} {Mouse: ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=312, Expect=5e-86]; ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=312, Expect=5e-86]} {RNA1509_25042} {RNA1310_285} {RNA815_97.1}
63. MligTC455_34129 35 0.73 Mlig455_034671

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_034671 {REF} {Length: 710} {NoTransDecoderORF} {RNA1509_25730} {RNA1310_51993} {RNA815_11470.1}
64. MligTC455_34130 35 0.73 Mlig455_034673

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_034673 {REF} {Length: 1038} {NoTransDecoderORF} {RNA1509_25730} {RNA1310_51993} {RNA815_11470.2}
65. MligTC455_35933 19 0.4 Mlig455_033271

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_033271 {REF} {Length: 1256} {RNA1310_22041} {RNA815_26444}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA