Data search
Results for MligTC455_15342
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15342 | 113 | 2.36 | Mlig455_012133 | Neo: Irradiation Age: - |
PRKG1 | Mlig455_012133 {REF} {Length: 2379} {Pfam: Protein kinase domain [PF00069.27, score=235.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.4]; Cyclic nucleotide-binding domain [PF00027.31, score=62.6]; Kinase-like [PF14531.8, score=19.9]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=634, Expect=0.0]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=634, Expect=0.0]} {Dmel: FBgn0000721, for, foraging, [Score=623, Expect=0.0]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [Score=573, Expect=0.0]} {Smed: dd_Smed_v6_16434_0_1, dd_Smed_v6_16434_0_1, [Score=669, Expect=0.0]} {RNA1509_32231} {RNA1310_18553.1} {RNA815_13824} |
Cumulative graph for MligTC455_15342
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.006 | 2.086 | 0.46036 | 1.00000 | |
| RegionR2 | 0.663 | 2.086 | 0.59465 | 0.94669 | |
| RegionR3 | -1.855 | 2.086 | 0.99894 | 1.00000 | |
| RegionR4 | -0.2 | 2.086 | 0.91083 | 1.00000 | |
| RegionR5 | 1.319 | 2.086 | 0.14835 | 0.40000 | |
| RegionR6 | 0.352 | 2.086 | 0.70813 | 1.00000 | |
| RegionR7 | 1.187 | 2.086 | 0.37567 | 1.00000 | |
| RegionR8 | 2.54 | 2.086 | 0.06755 | 0.50100 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.002 | 2.086 | 0.99992 | 1.00000 | |
| RegenerationR2 | 0.571 | 2.086 | 0.45427 | 0.84956 | |
| RegenerationR3 | 1.531 | 2.086 | 0.18824 | 0.62350 | |
| RegenerationR4 | -0.067 | 2.086 | 0.93694 | 1.00000 | |
| RegenerationR5 | -0.437 | 2.086 | 0.58121 | 0.90094 | |
| RegenerationR6 | 0.661 | 2.086 | 0.48280 | 0.79348 | |
| RegenerationBL | -0.077 | 2.086 | 0.93365 | 1.00000 | |
| RegenerationTP | -1.669 | 2.086 | 0.17523 | 0.60881 |
Genes with expression patterns similar to MligTC455_15342
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15342 | 113 | 2.36 | Mlig455_012133 | Neo: Irradiation Age: - |
PRKG1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_012133 {REF} {Length: 2379} {Pfam: Protein kinase domain [PF00069.27, score=235.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.4]; Cyclic nucleotide-binding domain [PF00027.31, score=62.6]; Kinase-like [PF14531.8, score=19.9]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=634, Expect=0.0]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=634, Expect=0.0]} {Dmel: FBgn0000721, for, foraging, [Score=623, Expect=0.0]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [Score=573, Expect=0.0]} {Smed: dd_Smed_v6_16434_0_1, dd_Smed_v6_16434_0_1, [Score=669, Expect=0.0]} {RNA1509_32231} {RNA1310_18553.1} {RNA815_13824} |
| 2. | MligTC455_32226 | 147 | 3.06 | Mlig455_046152 | Neo: - Age: - |
PARG | 1.796 | - | - | - | - | 0.823 | 0.973 | Mlig455_046152 {REF} {Length: 4066} {TRANSSPLICED} {Pfam: Poly (ADP-ribose) glycohydrolase (PARG) [PF05028.16, score=401.0]} {Human: ENSG00000227345, PARG, poly(ADP-ribose) glycohydrolase, [RH, Score=358, Expect=3e-110]} {Mouse: ENSMUSG00000021911, Parg, poly (ADP-ribose) glycohydrolase, [RH, Score=354, Expect=4e-109]} {Dmel: FBgn0023216, Parg, Poly(ADP-ribose) glycohydrolase, [RH, Score=355, Expect=5e-112]} {Celegans: WBGene00004052, parg-2, Poly(ADP-ribose) glycohydrolase 2, [RH, Score=180, Expect=2e-49]} {Smed: dd_Smed_v6_8617_0_1, dd_Smed_v6_8617_0_1, [RH, Score=324, Expect=1e-102]} {RNA1509_56849} {RNA1310_3589} {RNA815_2442.1} |
| 3. | MligTC455_25082 | 424 | 8.84 | Mlig455_012948, Mlig455_012957 | Neo: - Age: - |
1.715 | 0.747 | - | - | - | - | 0.968 | Mlig455_012948 {REF} {Length: 4485} {TRANSSPLICED} {RNA1509_30362} {RNA1310_30094} {RNA815_13242} Mlig455_012957 {REF} {Length: 4141} {TRANSSPLICED} {RNA1509_30362, RNA1509_48752} {RNA1310_30094, RNA1509_48752} {RNA1509_48752, RNA815_13242} |
|
| 4. | MligTC455_12864 | 499 | 10.4 | Mlig455_004368 | Neo: Irradiation Age: logFC(26M/2M)=0.334 Region-enriched R5: 1.078/0.02209 |
1.67 | - | - | - | - | 0.951 | 0.719 | Mlig455_004368 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=26.6]; Immunoglobulin domain [PF13895.8, score=23.3]} {RNA1509_37987, RNA1509_39974} {RNA1310_51955, RNA1509_37987, RNA1509_39974} {RNA1509_37987, RNA1509_39974, RNA815_29559} | |
| 5. | MligTC455_47721 | 25 | 0.51 | Mlig455_017471 | Neo: - Age: logFC(26M/2M)=0.335 |
SLC18B1 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_017471 {REF} {Length: 2642} {Pfam: Major Facilitator Superfamily [PF07690.18, score=151.5]; Sugar (and other) transporter [PF00083.26, score=18.1]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [RH, Score=193, Expect=3e-56]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=214, Expect=3e-63]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=227, Expect=4e-68]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_14952} {RNA1310_8790} {RNA815_3189} |
| 6. | MligTC455_44105 | 358 | 7.46 | Mlig455_056757 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_056757 {REF} {Length: 984} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=22.3} {RNA1509_45595} {RNA1310_59324} {RNA815_34165} | |
| 7. | MligTC455_42013 | 288 | 5.99 | Mlig455_051057 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.962/0.04254 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_051057 {REF} {Length: 550} {TRANSSPLICED} {RNA1509_50519} {RNA1310_72208} {RNA815_52856} | |
| 8. | MligTC455_47825 | 1149 | 23.93 | Mlig455_050437 | Neo: - Age: - |
SPCS1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_050437 {REF} {Length: 1531} {TRANSSPLICED} {Pfam: Microsomal signal peptidase 12 kDa subunit (SPC12) [PF06645.15, score=104.4]} {Human: ENSG00000114902, SPCS1, signal peptidase complex subunit 1, [RH, Score=94.7, Expect=3e-26]} {Mouse: ENSMUSG00000021917, Spcs1, signal peptidase complex subunit 1 homolog (S. cerevisiae), [RH, Score=92.8, Expect=1e-25]} {Dmel: FBgn0040623, Spase12, Spase 12-subunit, [Score=87.0, Expect=1e-23]} {Celegans: WBGene00016395, C34B2.10, Probable signal peptidase complex subunit 1, [RH, Score=66.2, Expect=2e-15]} {Smed: dd_Smed_v6_992_0_1, dd_Smed_v6_992_0_1, [Score=83.6, Expect=4e-22]} {RNA1509_19143, RNA1509_37726, RNA1509_55941, RNA1509_56318} {RNA1310_50835, RNA1509_19143, RNA1509_37726, RNA1509_55941, RNA1509_56318} {RNA1509_19143, RNA1509_37726, RNA1509_55941, RNA1509_56318, RNA815_15025.1} |
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