Data search
Results for MligTC455_42013
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42013 | 288 | 5.99 | Mlig455_051057 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.962/0.04254 |
Mlig455_051057 {REF} {Length: 550} {TRANSSPLICED} {RNA1509_50519} {RNA1310_72208} {RNA815_52856} |
Cumulative graph for MligTC455_42013
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.742 | 3.189 | 0.16867 | 0.79362 | |
| RegionR2 | 0.908 | 3.189 | 0.31760 | 0.70846 | |
| RegionR3 | 0.555 | 3.189 | 0.53544 | 1.00000 | |
| RegionR4 | 1.962 | 3.189 | 0.00612 | 0.04254 | |
| RegionR5 | 1.116 | 3.189 | 0.12636 | 0.35883 | |
| RegionR6 | 1.068 | 3.189 | 0.18105 | 0.74489 | |
| RegionR7 | 0.175 | 3.189 | 0.79153 | 1.00000 | |
| RegionR8 | -0.041 | 3.189 | 0.87304 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.292 | 3.189 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.037 | 3.189 | 0.92882 | 1.00000 | |
| RegenerationR3 | 0.244 | 3.189 | 0.62392 | 0.91780 | |
| RegenerationR4 | 0.04 | 3.189 | 0.93516 | 1.00000 | |
| RegenerationR5 | -0.34 | 3.189 | 0.43798 | 0.82303 | |
| RegenerationR6 | 0.678 | 3.189 | 0.15059 | 0.47570 | |
| RegenerationBL | -0.266 | 3.189 | 0.74135 | 1.00000 | |
| RegenerationTP | 0.717 | 3.189 | 0.36701 | 0.80538 |
Genes with expression patterns similar to MligTC455_42013
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42013 | 288 | 5.99 | Mlig455_051057 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.962/0.04254 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051057 {REF} {Length: 550} {TRANSSPLICED} {RNA1509_50519} {RNA1310_72208} {RNA815_52856} | |
| 2. | MligTC455_22052 | 689 | 14.35 | Mlig455_035177 | Neo: - Age: - Region-enriched R5: 1.408/0.00044 |
GPN2 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_035177 {REF} {Length: 2647} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.4} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=219.8]} {Human: ENSG00000142751, GPN2, GPN-loop GTPase 2, [RH, Score=292, Expect=4e-98]} {Mouse: ENSMUSG00000028848, Gpn2, GPN-loop GTPase 2, [RH, Score=300, Expect=1e-101]} {Dmel: FBgn0036356, CG10222, [RH, Score=239, Expect=7e-78]} {Celegans: WBGene00015029, B0207.6, [RH, Score=186, Expect=1e-57]} {Smed: dd_Smed_v6_7936_0_1, dd_Smed_v6_7936_0_1, [RH, Score=145, Expect=7e-42]} {RNA1509_23035, RNA1509_45279} {RNA1310_31077, RNA1509_23035, RNA1509_45279} {RNA1509_23035, RNA1509_45279, RNA815_13889.1} |
| 3. | MligTC455_32742 | 187 | 3.9 | Mlig455_064981 | Neo: - Age: - Region-enriched R4: 2.677/0.04748 |
KY | 0.963 | - | - | - | 0.963 | - | - | Mlig455_064981 {REF} {Length: 6268} {TRANSSPLICED} {Pfam: Transglutaminase-like superfamily [PF01841.21, score=33.7]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=127, Expect=9e-30]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=131, Expect=6e-31]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=220, Expect=2e-59]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=204, Expect=8e-57]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=461, Expect=1e-147]} {RNA1509_1987} {RNA1310_669} {RNA815_5918.1} |
| 4. | MligTC455_15342 | 113 | 2.36 | Mlig455_012133 | Neo: Irradiation Age: - |
PRKG1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_012133 {REF} {Length: 2379} {Pfam: Protein kinase domain [PF00069.27, score=235.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=122.4]; Cyclic nucleotide-binding domain [PF00027.31, score=62.6]; Kinase-like [PF14531.8, score=19.9]} {Human: ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=634, Expect=0.0]} {Mouse: ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=634, Expect=0.0]} {Dmel: FBgn0000721, for, foraging, [Score=623, Expect=0.0]} {Celegans: WBGene00001173, egl-4, cGMP-dependent protein kinase egl-4, [Score=573, Expect=0.0]} {Smed: dd_Smed_v6_16434_0_1, dd_Smed_v6_16434_0_1, [Score=669, Expect=0.0]} {RNA1509_32231} {RNA1310_18553.1} {RNA815_13824} |
| 5. | MligTC455_42137 | 1537 | 32.03 | Mlig455_010815 | Neo: Int S/G2/M Age: - |
UBA6 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_010815 {REF} {Length: 3403} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=302.0]; Ubiquitin-activating enzyme active site [PF10585.11, score=199.8]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=31.3]; Ubiquitin fold domain [PF09358.12, score=30.4]} {Human: ENSG00000033178, UBA6, ubiquitin like modifier activating enzyme 6, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000035898, Uba6, ubiquitin-like modifier activating enzyme 6, [RH, Score=772, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [Score=548, Expect=2e-178]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [Score=479, Expect=2e-152]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [Score=560, Expect=0.0]} {RNA1509_14558} {RNA1310_3925} {RNA815_1162} |
| 6. | MligTC455_42138 | 1567 | 32.64 | Mlig455_033226 | Neo: - Age: Down-Down-Up |
UBA6 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_033226 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=302.0]; Ubiquitin-activating enzyme active site [PF10585.11, score=198.0]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=31.3]; Ubiquitin fold domain [PF09358.12, score=30.4]} {Human: ENSG00000033178, UBA6, ubiquitin like modifier activating enzyme 6, [RH, Score=772, Expect=0.0]} {Mouse: ENSMUSG00000035898, Uba6, ubiquitin-like modifier activating enzyme 6, [RH, Score=772, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [Score=546, Expect=8e-178]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [Score=477, Expect=2e-151]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [Score=561, Expect=0.0]} {RNA1509_14558} {RNA1310_3925, RNA1509_14558} {RNA1509_14558, RNA815_1162} |
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